RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 FAM90A15PP0C7V4 464 aa17.1■□□□□ 0.33
UBC-201ENST00000339647 FAM90A13PP0C7W8 464 aa17.1■□□□□ 0.33
UBC-201ENST00000339647 FAM90A14PP0C7W9 464 aa17.1■□□□□ 0.33
UBC-201ENST00000339647 FAM90A24PP0C7X0 464 aa17.1■□□□□ 0.33
UBC-201ENST00000339647 HNRNPKP61978 463 aaKnown RBP eCLIP17.1■□□□□ 0.33
UBC-201ENST00000339647 LCN2P80188 198 aa17.1■□□□□ 0.33
UBC-201ENST00000339647 LSM10Q969L4 123 aaKnown RBP17.1■□□□□ 0.33
UBC-201ENST00000339647 NEIL1Q96FI4 390 aaPredicted RBP17.1■□□□□ 0.33
UBC-201ENST00000339647 IGLV2-14P01704 120 aa17.1■□□□□ 0.33
UBC-201ENST00000339647 RPS16P62249 146 aaKnown RBP17.1■□□□□ 0.33
UBC-201ENST00000339647 HLA-BQ31612 363 aa17.1■□□□□ 0.33
UBC-201ENST00000339647 Q6ZWC4 215 aa17.1■□□□□ 0.33
UBC-201ENST00000339647 RDH5Q92781 318 aa17.1■□□□□ 0.33
UBC-201ENST00000339647 OPN3Q9H1Y3 402 aaPredicted RBP17.1■□□□□ 0.33
UBC-201ENST00000339647 IGHV1OR15-9A0A0B4J2B8 117 aa17.09■□□□□ 0.33
UBC-201ENST00000339647 PGPEP1LA6NFU8 196 aa17.09■□□□□ 0.33
UBC-201ENST00000339647 CRYAAP02489 173 aa17.09■□□□□ 0.33
UBC-201ENST00000339647 ADMP35318 185 aa17.09■□□□□ 0.33
UBC-201ENST00000339647 MPLP40238 635 aa17.09■□□□□ 0.33
UBC-201ENST00000339647 TNFSF10P50591 281 aa17.09■□□□□ 0.33
UBC-201ENST00000339647 ZNF585BQ52M93 769 aa17.09■□□□□ 0.33
UBC-201ENST00000339647 OR56B2PQ8NGI1 322 aa17.09■□□□□ 0.33
UBC-201ENST00000339647 MIEN1Q9BRT3 115 aa17.09■□□□□ 0.33
UBC-201ENST00000339647 PARD6GQ9BYG4 376 aaPredicted RBP17.09■□□□□ 0.33
UBC-201ENST00000339647 GPR35Q9HC97 309 aa17.09■□□□□ 0.33
UBC-201ENST00000339647 TMEM106BQ9NUM4 274 aa17.09■□□□□ 0.33
UBC-201ENST00000339647 ZNF391Q9UJN7 358 aa17.09■□□□□ 0.33
UBC-201ENST00000339647 PAM16Q9Y3D7 125 aa17.09■□□□□ 0.33
UBC-201ENST00000339647 TOX3O15405 576 aaPredicted RBP17.09■□□□□ 0.33
UBC-201ENST00000339647 YPEL1O60688 119 aa17.09■□□□□ 0.33
UBC-201ENST00000339647 CLDN1O95832 211 aa17.09■□□□□ 0.33
UBC-201ENST00000339647 IGFBP4P22692 258 aa17.09■□□□□ 0.33
UBC-201ENST00000339647 PPP1CBP62140 327 aa17.09■□□□□ 0.33
UBC-201ENST00000339647 TMEM144Q7Z5S9 345 aa17.09■□□□□ 0.33
UBC-201ENST00000339647 LINC01551Q86U37 167 aa17.09■□□□□ 0.33
UBC-201ENST00000339647 UBALD1Q8TB05 177 aa17.09■□□□□ 0.33
UBC-201ENST00000339647 ZNF488Q96MN9 340 aa17.09■□□□□ 0.33
UBC-201ENST00000339647 YPEL2Q96QA6 119 aa17.09■□□□□ 0.33
UBC-201ENST00000339647 VENTXO95231 258 aa17.08■□□□□ 0.33
UBC-201ENST00000339647 C1QTNF9P0C862 333 aa17.08■□□□□ 0.33
UBC-201ENST00000339647 FFAR4Q5NUL3 377 aa17.08■□□□□ 0.33
UBC-201ENST00000339647 CARFQ8N187 725 aa17.08■□□□□ 0.33
UBC-201ENST00000339647 CMTM2Q8TAZ6 248 aa17.08■□□□□ 0.33
UBC-201ENST00000339647 OR5P3Q8WZ94 311 aa17.08■□□□□ 0.33
UBC-201ENST00000339647 IMMP2LQ96T52 175 aa17.08■□□□□ 0.33
UBC-201ENST00000339647 DERL1Q9BUN8 251 aa17.08■□□□□ 0.33
UBC-201ENST00000339647 MLNRO43193 412 aa17.08■□□□□ 0.32
UBC-201ENST00000339647 LINC00614P0C842 121 aa17.08■□□□□ 0.32
UBC-201ENST00000339647 CCL3P10147 92 aa17.08■□□□□ 0.32
UBC-201ENST00000339647 CD27P26842 260 aa17.08■□□□□ 0.32
UBC-201ENST00000339647 TFPI2P48307 235 aa17.08■□□□□ 0.32
UBC-201ENST00000339647 PRDX4Q13162 271 aa17.08■□□□□ 0.32
UBC-201ENST00000339647 CEACAM16Q2WEN9 425 aa17.08■□□□□ 0.32
UBC-201ENST00000339647 OR6C1Q96RD1 312 aa17.08■□□□□ 0.32
UBC-201ENST00000339647 AKIRIN1Q9H9L7 192 aaPredicted RBP17.08■□□□□ 0.32
UBC-201ENST00000339647 TIMM9Q9Y5J7 89 aa17.08■□□□□ 0.32
UBC-201ENST00000339647 C11orf94C9JXX5 98 aa17.07■□□□□ 0.32
UBC-201ENST00000339647 TNFSF13O75888 250 aa17.07■□□□□ 0.32
UBC-201ENST00000339647 CDKN1AP38936 164 aa17.07■□□□□ 0.32
UBC-201ENST00000339647 PRR18Q8N4B5 295 aa17.07■□□□□ 0.32
UBC-201ENST00000339647 ZNF114Q8NC26 417 aa17.07■□□□□ 0.32
UBC-201ENST00000339647 TECTBQ96PL2 329 aa17.07■□□□□ 0.32
UBC-201ENST00000339647 FOXB1Q99853 325 aa17.07■□□□□ 0.32
UBC-201ENST00000339647 TP53TG3Q9ULZ0 132 aa17.07■□□□□ 0.32
UBC-201ENST00000339647 SYNGR1O43759 233 aa17.07■□□□□ 0.32
UBC-201ENST00000339647 TFF3Q07654 80 aa17.07■□□□□ 0.32
UBC-201ENST00000339647 TPTE2P1Q5T6R2 138 aa17.07■□□□□ 0.32
UBC-201ENST00000339647 SLC23A3Q6PIS1 610 aa17.07■□□□□ 0.32
UBC-201ENST00000339647 TMEM14EPQ6UXP3 125 aa17.07■□□□□ 0.32
UBC-201ENST00000339647 RABEPKQ7Z6M1 372 aa17.07■□□□□ 0.32
UBC-201ENST00000339647 CPEB3Q8NE35 698 aaKnown RBP17.07■□□□□ 0.32
UBC-201ENST00000339647 C20orf144Q9BQM9 153 aa17.07■□□□□ 0.32
UBC-201ENST00000339647 OR2J1Q9GZK6 312 aa17.07■□□□□ 0.32
UBC-201ENST00000339647 CRYABP02511 175 aaKnown RBP17.06■□□□□ 0.32
UBC-201ENST00000339647 CCNOP22674 350 aa17.06■□□□□ 0.32
UBC-201ENST00000339647 SOX8P57073 446 aa17.06■□□□□ 0.32
UBC-201ENST00000339647 CPT1CQ8TCG5 803 aa17.06■□□□□ 0.32
UBC-201ENST00000339647 TMEM9BQ9NQ34 198 aa17.06■□□□□ 0.32
UBC-201ENST00000339647 GNB1P62873 340 aa17.06■□□□□ 0.32
UBC-201ENST00000339647 OR5I1Q13606 314 aa17.06■□□□□ 0.32
UBC-201ENST00000339647 SGMS2Q8NHU3 365 aa17.06■□□□□ 0.32
UBC-201ENST00000339647 SGCZQ96LD1 299 aa17.06■□□□□ 0.32
UBC-201ENST00000339647 TRAPPC2LH3BP13 241 aa17.05■□□□□ 0.32
UBC-201ENST00000339647 SCRG1O75711 98 aa17.05■□□□□ 0.32
UBC-201ENST00000339647 WNT2P09544 360 aa17.05■□□□□ 0.32
UBC-201ENST00000339647 CCL2P13500 99 aa17.05■□□□□ 0.32
UBC-201ENST00000339647 LIFP15018 202 aa17.05■□□□□ 0.32
UBC-201ENST00000339647 LINC00310P59036 64 aa17.05■□□□□ 0.32
UBC-201ENST00000339647 UBE2G2P60604 165 aa17.05■□□□□ 0.32
UBC-201ENST00000339647 TEX43Q6ZNM6 134 aa17.05■□□□□ 0.32
UBC-201ENST00000339647 PROK2Q9HC23 129 aa17.05■□□□□ 0.32
UBC-201ENST00000339647 ELOVL5Q9NYP7 299 aa17.05■□□□□ 0.32
UBC-201ENST00000339647 ESPL1Q14674 2120 aa17.05■□□□□ 0.32
UBC-201ENST00000339647 AAED1Q7RTV5 226 aa17.05■□□□□ 0.32
UBC-201ENST00000339647 SPSB4Q96A44 273 aa17.05■□□□□ 0.32
UBC-201ENST00000339647 STRADBQ9C0K7 418 aa17.05■□□□□ 0.32
UBC-201ENST00000339647 PATZ1Q9HBE1 687 aaKnown RBP17.05■□□□□ 0.32
UBC-201ENST00000339647 KCNS2Q9ULS6 477 aa17.05■□□□□ 0.32
UBC-201ENST00000339647 RBM7Q9Y580 266 aaKnown RBP17.05■□□□□ 0.32
UBC-201ENST00000339647 ADAMTS20P59510 1910 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms