RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 ACSM6Q6P461 480 aa13.67□□□□□ -0.22
SCARB1-202ENST00000339570 TGIF2LXQ8IUE1 241 aa13.67□□□□□ -0.22
SCARB1-202ENST00000339570 SPEM1Q8N4L4 309 aa13.67□□□□□ -0.22
SCARB1-202ENST00000339570 REPIN1Q9BWE0 567 aaKnown RBP13.67□□□□□ -0.22
SCARB1-202ENST00000339570 C1QTNF5Q9BXJ0 243 aa13.67□□□□□ -0.22
SCARB1-202ENST00000339570 UBE2ZQ9H832 354 aaPredicted RBP13.67□□□□□ -0.22
SCARB1-202ENST00000339570 FGF7P21781 194 aa13.67□□□□□ -0.22
SCARB1-202ENST00000339570 CD81P60033 236 aa13.67□□□□□ -0.22
SCARB1-202ENST00000339570 PLP2Q04941 152 aa13.67□□□□□ -0.22
SCARB1-202ENST00000339570 ALKBH6Q3KRA9 238 aa13.67□□□□□ -0.22
SCARB1-202ENST00000339570 SNIP1Q8TAD8 396 aaKnown RBP13.67□□□□□ -0.22
SCARB1-202ENST00000339570 RAB40CQ96S21 281 aa13.67□□□□□ -0.22
SCARB1-202ENST00000339570 PARLQ9H300 379 aa13.67□□□□□ -0.22
SCARB1-202ENST00000339570 IL36GQ9NZH8 169 aa13.67□□□□□ -0.22
SCARB1-202ENST00000339570 CNOT1A5YKK6 2376 aaKnown RBP13.67□□□□□ -0.22
SCARB1-202ENST00000339570 GNB2P62879 340 aa13.67□□□□□ -0.22
SCARB1-202ENST00000339570 FOXO1Q12778 655 aa13.67□□□□□ -0.22
SCARB1-202ENST00000339570 FFAR4Q5NUL3 377 aa13.67□□□□□ -0.22
SCARB1-202ENST00000339570 FGFRL1Q8N441 504 aa13.67□□□□□ -0.22
SCARB1-202ENST00000339570 SMDT1Q9H4I9 107 aa13.67□□□□□ -0.22
SCARB1-202ENST00000339570 CISD1Q9NZ45 108 aaKnown RBP13.67□□□□□ -0.22
SCARB1-202ENST00000339570 ARFGEF3Q5TH69 2177 aa13.66□□□□□ -0.22
SCARB1-202ENST00000339570 EP300Q09472 2414 aaPredicted RBP13.66□□□□□ -0.22
SCARB1-202ENST00000339570 SMG1Q96Q15 3661 aaKnown RBP13.66□□□□□ -0.22
SCARB1-202ENST00000339570 NXPH2O95156 264 aa13.66□□□□□ -0.22
SCARB1-202ENST00000339570 PKIAP61925 76 aa13.66□□□□□ -0.22
SCARB1-202ENST00000339570 PLGLB1Q02325 96 aa13.66□□□□□ -0.22
SCARB1-202ENST00000339570 ZNF826PQ6ZT77 177 aa13.66□□□□□ -0.22
SCARB1-202ENST00000339570 ZNF664Q8N3J9 261 aa13.66□□□□□ -0.22
SCARB1-202ENST00000339570 TAF15Q92804 592 aaKnown RBP eCLIP13.66□□□□□ -0.222e-6■■■□□ 15
SCARB1-202ENST00000339570 PRDM6Q9NQX0 595 aa13.66□□□□□ -0.22
SCARB1-202ENST00000339570 MEF2BQ02080 365 aaPredicted RBP13.66□□□□□ -0.22
SCARB1-202ENST00000339570 FAM78BQ5VT40 261 aa13.66□□□□□ -0.22
SCARB1-202ENST00000339570 OR10G4Q8NGN3 311 aa13.66□□□□□ -0.22
SCARB1-202ENST00000339570 OR10G9Q8NGN4 311 aa13.66□□□□□ -0.22
SCARB1-202ENST00000339570 OR10G7Q8NGN6 311 aa13.66□□□□□ -0.22
SCARB1-202ENST00000339570 DERL1Q9BUN8 251 aa13.66□□□□□ -0.22
SCARB1-202ENST00000339570 OR2D2Q9H210 308 aa13.66□□□□□ -0.22
SCARB1-202ENST00000339570 TRAV38-1A0A0B4J264 116 aa13.66□□□□□ -0.22
SCARB1-202ENST00000339570 ZG16O60844 167 aa13.66□□□□□ -0.22
SCARB1-202ENST00000339570 OR4A8P0C604 315 aa13.66□□□□□ -0.22
SCARB1-202ENST00000339570 GZMBP10144 247 aa13.66□□□□□ -0.22
SCARB1-202ENST00000339570 OR8G1Q15617 311 aa13.66□□□□□ -0.22
SCARB1-202ENST00000339570 M1APQ8TC57 530 aa13.66□□□□□ -0.22
SCARB1-202ENST00000339570 MSL2Q9HCI7 577 aa13.66□□□□□ -0.22
SCARB1-202ENST00000339570 PDGFBP01127 241 aaPredicted RBP13.65□□□□□ -0.22
SCARB1-202ENST00000339570 IFNA1P01562 189 aa13.65□□□□□ -0.22
SCARB1-202ENST00000339570 CELA3BP08861 270 aa13.65□□□□□ -0.22
SCARB1-202ENST00000339570 MAS1LP35410 378 aa13.65□□□□□ -0.22
SCARB1-202ENST00000339570 PSMB3P49720 205 aa13.65□□□□□ -0.22
SCARB1-202ENST00000339570 CASP6P55212 293 aa13.65□□□□□ -0.22
SCARB1-202ENST00000339570 EDDM3BP56851 147 aa13.65□□□□□ -0.22
SCARB1-202ENST00000339570 RPL23P62829 140 aaKnown RBP13.65□□□□□ -0.22
SCARB1-202ENST00000339570 NUFIP2Q7Z417 695 aaKnown RBP13.65□□□□□ -0.22
SCARB1-202ENST00000339570 OR52L2PQ8NGH6 319 aa13.65□□□□□ -0.22
SCARB1-202ENST00000339570 OR1P1Q8NH06 330 aa13.65□□□□□ -0.22
SCARB1-202ENST00000339570 OR1L1Q8NH94 360 aa13.65□□□□□ -0.22
SCARB1-202ENST00000339570 WDR61Q9GZS3 305 aaKnown RBP13.65□□□□□ -0.22
SCARB1-202ENST00000339570 PATZ1Q9HBE1 687 aaKnown RBP13.65□□□□□ -0.22
SCARB1-202ENST00000339570 CBLN4Q9NTU7 201 aa13.65□□□□□ -0.22
SCARB1-202ENST00000339570 ELOA3CA0A087WX78 387 aaPredicted RBP13.65□□□□□ -0.22
SCARB1-202ENST00000339570 WNT9BO14905 357 aa13.65□□□□□ -0.22
SCARB1-202ENST00000339570 MT-CO3P00414 261 aa13.65□□□□□ -0.22
SCARB1-202ENST00000339570 OPN1MWP04001 364 aa13.65□□□□□ -0.22
SCARB1-202ENST00000339570 OPN1MW2P0DN77 364 aa13.65□□□□□ -0.22
SCARB1-202ENST00000339570 OPN1MW3P0DN78 364 aa13.65□□□□□ -0.22
SCARB1-202ENST00000339570 SELLP14151 372 aa13.65□□□□□ -0.22
SCARB1-202ENST00000339570 OR3A1P47881 315 aa13.65□□□□□ -0.22
SCARB1-202ENST00000339570 ZNF585BQ52M93 769 aa13.65□□□□□ -0.22
SCARB1-202ENST00000339570 TMEM41BQ5BJD5 291 aa13.65□□□□□ -0.22
SCARB1-202ENST00000339570 Q6ZSR3 168 aa13.65□□□□□ -0.22
SCARB1-202ENST00000339570 REC114Q7Z4M0 266 aa13.65□□□□□ -0.22
SCARB1-202ENST00000339570 DRAM1Q8N682 238 aa13.65□□□□□ -0.22
SCARB1-202ENST00000339570 POLEQ07864 2286 aa13.65□□□□□ -0.22
SCARB1-202ENST00000339570 WNT5AP41221 380 aa13.64□□□□□ -0.23
SCARB1-202ENST00000339570 BATFQ16520 125 aa13.64□□□□□ -0.23
SCARB1-202ENST00000339570 TCF23Q7RTU1 214 aa13.64□□□□□ -0.23
SCARB1-202ENST00000339570 MRGPRGQ86SM5 289 aa13.64□□□□□ -0.23
SCARB1-202ENST00000339570 APOBEC3DQ96AK3 386 aaPredicted RBP13.64□□□□□ -0.23
SCARB1-202ENST00000339570 PITPNC1Q9UKF7 332 aa13.64□□□□□ -0.23
SCARB1-202ENST00000339570 SPTBN2O15020 2390 aa13.64□□□□□ -0.23
SCARB1-202ENST00000339570 ADAMTS20P59510 1910 aa13.64□□□□□ -0.23
SCARB1-202ENST00000339570 OR2H2O95918 312 aa13.64□□□□□ -0.23
SCARB1-202ENST00000339570 ABHD14BQ96IU4 210 aa13.64□□□□□ -0.23
SCARB1-202ENST00000339570 LURAP1Q96LR2 239 aa13.64□□□□□ -0.23
SCARB1-202ENST00000339570 TMEM9BQ9NQ34 198 aa13.64□□□□□ -0.23
SCARB1-202ENST00000339570 SIT1Q9Y3P8 196 aa13.64□□□□□ -0.23
SCARB1-202ENST00000339570 LOC102723996A0A087X1L8 192 aa13.64□□□□□ -0.23
SCARB1-202ENST00000339570 GRIFINA4D1Z8 144 aa13.64□□□□□ -0.23
SCARB1-202ENST00000339570 ZNF705FA8MVS1 300 aaPredicted RBP13.64□□□□□ -0.23
SCARB1-202ENST00000339570 K7ESF4 209 aa13.64□□□□□ -0.23
SCARB1-202ENST00000339570 SPINK4O60575 86 aa13.64□□□□□ -0.23
SCARB1-202ENST00000339570 SYNGR4O95473 234 aa13.64□□□□□ -0.23
SCARB1-202ENST00000339570 ZNF705DP0CH99 300 aaPredicted RBP13.64□□□□□ -0.23
SCARB1-202ENST00000339570 ZNF705BP0CI00 300 aaPredicted RBP13.64□□□□□ -0.23
SCARB1-202ENST00000339570 AESQ08117 197 aa13.64□□□□□ -0.23
SCARB1-202ENST00000339570 LRRC75BQ2VPJ9 315 aa13.64□□□□□ -0.23
SCARB1-202ENST00000339570 KCNE4Q8WWG9 221 aa13.64□□□□□ -0.23
SCARB1-202ENST00000339570 APH1AQ96BI3 265 aa13.64□□□□□ -0.23
SCARB1-202ENST00000339570 DEFB127Q9H1M4 99 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 367.1 ms