RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 KIR2DS3Q14952 304 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 ADIRFQ15847 76 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 IGFBP7Q16270 282 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 SPATA45Q537H7 98 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 CXorf66Q5JRM2 361 aaPredicted RBP4.75□□□□□ -1.65
CSDE1-202ENST00000339438 FFAR4Q5NUL3 377 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 CST9LP1Q5W188 147 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 MYPOPQ86VE0 399 aaPredicted RBP4.75□□□□□ -1.65
CSDE1-202ENST00000339438 LGI3Q8N145 548 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 OR11L1Q8NGX0 322 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 APH1AQ96BI3 265 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 SARAFQ96BY9 339 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 SLC46A1Q96NT5 459 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 RTN4RQ9BZR6 473 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 PARLQ9H300 379 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 ANKUB1A6NFN9 424 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 C1QTNF9BB2RNN3 333 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 E9PLN8 166 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 B3GALT2O43825 422 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 GPX1P07203 203 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 C1QTNF9P0C862 333 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 TNFSF4P23510 183 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 GRK6P43250 576 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 SLC6A8P48029 635 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 ZNF154Q13106 437 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 OR2M3Q8NG83 312 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 ZNF501Q96CX3 271 aaPredicted RBP4.75□□□□□ -1.65
CSDE1-202ENST00000339438 ATP5SQ99766 215 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 H7BYZ3 331 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 WDR1O75083 606 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 MPIG6BO95866 241 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 RENP00797 406 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 FRMD6-AS1P0C7T7 363 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 BMP5P22003 454 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 TUBG1P23258 451 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 OMGP23515 440 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 RPS15AP62244 130 aaKnown RBP4.75□□□□□ -1.65
CSDE1-202ENST00000339438 Q0VG73 95 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 DAZAP2Q15038 168 aaPredicted RBP4.75□□□□□ -1.65
CSDE1-202ENST00000339438 NMSQ5H8A3 153 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 ZNF787Q6DD87 383 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 KCTD18Q6PI47 426 aaPredicted RBP4.75□□□□□ -1.65
CSDE1-202ENST00000339438 HAPLN4Q86UW8 402 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 WFDC8Q8IUA0 241 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 TMEM217Q8N7C4 229 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 OR5T1Q8NG75 326 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 OR52R1Q8NGF1 315 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 RNF133Q8WVZ7 376 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 RTN4IP1Q8WWV3 396 aaPredicted RBP4.75□□□□□ -1.65
CSDE1-202ENST00000339438 SLAMF6Q96DU3 332 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 OR2A5Q96R48 311 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 VPS25Q9BRG1 176 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 TMEM59Q9BXS4 323 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 MRPL13Q9BYD1 178 aaKnown RBP4.75□□□□□ -1.65
CSDE1-202ENST00000339438 IL19Q9UHD0 177 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 ANXA10Q9UJ72 324 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 TRAPPC1Q9Y5R8 145 aa4.75□□□□□ -1.65
CSDE1-202ENST00000339438 SERINC4A6NH21 518 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 TMEM250H0YL14 139 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 SLC16A7O60669 478 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 CST7O76096 145 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 KITLGP21583 273 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 MEF2BQ02080 365 aaPredicted RBP4.74□□□□□ -1.65
CSDE1-202ENST00000339438 BAXQ07812 192 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 CPEB2Q7Z5Q1 589 aaKnown RBP4.74□□□□□ -1.65
CSDE1-202ENST00000339438 NIT1Q86X76 327 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 OR4C5Q8NGB2 326 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 ABHD3Q8WU67 409 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 SMIM7Q9BQ49 75 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 RSG1Q9BU20 258 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 ZNF430Q9H8G1 570 aaPredicted RBP4.74□□□□□ -1.65
CSDE1-202ENST00000339438 TAAR3PQ9P1P4 343 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 SH3BGRL2Q9UJC5 107 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 CSMD3Q7Z407 3707 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 SAA2-SAA4A0A096LPE2 208 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 CORTO00230 105 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 SAP30O75446 220 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 GLI4P10075 376 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 HINT1P49773 126 aaPredicted RBP4.74□□□□□ -1.65
CSDE1-202ENST00000339438 ARF6P62330 175 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 ARL16Q0P5N6 197 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 ACKR1Q16570 336 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 OR4S2Q8NH73 311 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 GATAD1Q8WUU5 269 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 OR51I2Q9H344 312 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 PNO1Q9NRX1 252 aaKnown RBP4.74□□□□□ -1.65
CSDE1-202ENST00000339438 TP73-AS1Q9UF72 201 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 LHFPL6Q9Y693 200 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 CEP295Q9C0D2 2601 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 IGKV3D-11A0A0A0MRZ8 115 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 IGHV3-20A0A0C4DH32 117 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 A0A1W2PRS3 328 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 ZNF320A2RRD8 509 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 G3V4G9 280 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 DUX1O43812 170 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 NPIPB7O75200 414 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 IGLV3-1P01715 115 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 CD99P14209 185 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 GLB1P16278 677 aa4.74□□□□□ -1.65
CSDE1-202ENST00000339438 CCL1P22362 96 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms