RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 TMPRSS2O15393 492 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 SLC31A2O15432 143 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 SERPINE2P07093 398 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 VDAC1P21796 283 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 RPS23P62266 143 aaKnown RBP6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 UBA52P62987 128 aaKnown RBP6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 TLE1Q04724 770 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 ZNF816Q0VGE8 651 aaPredicted RBP6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 AANATQ16613 207 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 MST1LQ2TV78 715 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 BAP18Q8IXM2 172 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 FAM185AQ8N0U4 392 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 ZCCHC14Q8WYQ9 949 aaKnown RBP6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 FAM234AQ9H0X4 552 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 BARX1Q9HBU1 254 aaPredicted RBP6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 SDHAF2Q9NX18 166 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 CENPEQ02224 2701 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 SPG11Q96JI7 2443 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 ST8SIA3O43173 380 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 CHST1O43916 411 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 CST7O76096 145 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 KRASP01116 189 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 NKX2-1P43699 371 aaPredicted RBP6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 AKR1C2P52895 323 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 LOXL3P58215 753 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 AKR1C1Q04828 323 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 TCF23Q7RTU1 214 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 ZNF295-AS1Q8N0V1 137 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 STPG2Q8N412 459 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 OR5D13Q8NGL4 314 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 OR10Z1Q8NGY1 313 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 SNX22Q96L94 193 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 EPG5Q9HCE0 2579 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 ARHGAP32A7KAX9 2087 aa6.14□□□□□ -1.43
SRFBP1-201ENST00000339397 USP24Q9UPU5 2620 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 MFSD2BA6NFX1 497 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 KIAA1324LA8MWY0 1029 aaPredicted RBP6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 LY6HO94772 140 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 FAM157CP0CG43 387 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 PET100P0DJ07 73 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 G6PCP35575 357 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 FHITP49789 147 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 CAV2P51636 162 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 ARHGDIBP52566 201 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 MZT1Q08AG7 82 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 RPL39P5Q59GN2 51 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 NCMAPQ5T1S8 102 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 STUMQ69YW2 141 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 PDZD9Q8IXQ8 264 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 TMEM217Q8N7C4 229 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 ST6GALNAC3Q8NDV1 305 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 RNASE6Q93091 150 aaKnown RBP6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 GAFA1Q96PS6 74 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 C11orf1Q9H5F2 150 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 CACNG5Q9UF02 275 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 MYO18BQ8IUG5 2567 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 USP9XQ93008 2570 aaPredicted RBP6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 TNCP24821 2201 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 IGSF23A1L1A6 192 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 MGST3O14880 152 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 SNAPC5O75971 98 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 NUP62P37198 522 aaPredicted RBP6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 PAX9P55771 341 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 ID3Q02535 119 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 EIF4EBP1Q13541 118 aaPredicted RBP6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 CLINT1Q14677 625 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 SMCO1Q147U7 214 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 C17orf58Q2M2W7 97 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 Q3ZCU0 254 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 MORN2Q502X0 79 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 LYPD2Q6UXB3 125 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 ZNF645Q8N7E2 425 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 OR1S2Q8NGQ3 325 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 FAM222BQ8WU58 562 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 NINJ1Q92982 152 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 LURAP1Q96LR2 239 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 LINC00052Q96N35 136 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 SAP30LQ9HAJ7 183 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 GNG12Q9UBI6 72 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 NSG2Q9Y328 171 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 RNF115Q9Y4L5 304 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 POMT1Q9Y6A1 747 aa6.13□□□□□ -1.43
SRFBP1-201ENST00000339397 TUBAL3A6NHL2 446 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 E5RGE8 158 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 WRBO00258 174 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 CLDN14O95500 239 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 TPT1P13693 172 aaKnown RBP6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 LPAR6P43657 344 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 UQCRFS1P47985 274 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 DLX1P56177 255 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 P2RX3P56373 397 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 SRSF3P84103 164 aaKnown RBP6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 PRB3Q04118 309 aaPredicted RBP6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 NCR3LG1Q68D85 454 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 STOML3Q8TAV4 291 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 SH3BGRL3Q9H299 93 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 CISD1Q9NZ45 108 aaKnown RBP6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 COQ3Q9NZJ6 369 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 SPINT2O43291 252 aa6.12□□□□□ -1.43
SRFBP1-201ENST00000339397 PITX3O75364 302 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms