RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 FAM90A7PA6NKC0 464 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 FAM90A22PA8MWA6 464 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 FAM90A12PA8MX19 464 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 FAM90A5PA8MXJ8 464 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 FAM90A23PA8MXZ1 464 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 C3orf80F5H4A9 247 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 TNFSF13O75888 250 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 FAM90A15PP0C7V4 464 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 FAM90A13PP0C7W8 464 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 FAM90A14PP0C7W9 464 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 FAM90A24PP0C7X0 464 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 SPINK2P20155 84 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 TFPI2P48307 235 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 GPM6AP51674 278 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 FGF12P61328 243 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 PRDX4Q13162 271 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 LSM10Q969L4 123 aaKnown RBP17.28■□□□□ 0.36
RUNX3-202ENST00000338888 SRXN1Q9BYN0 137 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 OR2J1Q9GZK6 312 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 MRPS17Q9Y2R5 130 aaKnown RBP17.28■□□□□ 0.36
RUNX3-202ENST00000338888 A0A0J9YW62 118 aa17.27■□□□□ 0.36
RUNX3-202ENST00000338888 HS3ST1O14792 307 aa17.27■□□□□ 0.36
RUNX3-202ENST00000338888 CLDN1O95832 211 aa17.27■□□□□ 0.36
RUNX3-202ENST00000338888 CRYAAP02489 173 aa17.27■□□□□ 0.36
RUNX3-202ENST00000338888 ADMP35318 185 aa17.27■□□□□ 0.36
RUNX3-202ENST00000338888 MPLP40238 635 aa17.27■□□□□ 0.36
RUNX3-202ENST00000338888 LINC01551Q86U37 167 aa17.27■□□□□ 0.36
RUNX3-202ENST00000338888 DTD1Q8TEA8 209 aa17.27■□□□□ 0.36
RUNX3-202ENST00000338888 C20orf144Q9BQM9 153 aa17.27■□□□□ 0.36
RUNX3-202ENST00000338888 PARD6GQ9BYG4 376 aaPredicted RBP17.27■□□□□ 0.36
RUNX3-202ENST00000338888 FGF23Q9GZV9 251 aaPredicted RBP17.27■□□□□ 0.36
RUNX3-202ENST00000338888 ZNF391Q9UJN7 358 aa17.27■□□□□ 0.36
RUNX3-202ENST00000338888 SDK2Q58EX2 2172 aa17.27■□□□□ 0.36
RUNX3-202ENST00000338888 A0A1W2PR77 199 aa17.27■□□□□ 0.35
RUNX3-202ENST00000338888 YPEL1O60688 119 aa17.27■□□□□ 0.35
RUNX3-202ENST00000338888 TMEM144Q7Z5S9 345 aa17.27■□□□□ 0.35
RUNX3-202ENST00000338888 PRR18Q8N4B5 295 aa17.27■□□□□ 0.35
RUNX3-202ENST00000338888 Q8NFD4 153 aa17.27■□□□□ 0.35
RUNX3-202ENST00000338888 YPEL2Q96QA6 119 aa17.27■□□□□ 0.35
RUNX3-202ENST00000338888 OR2H1Q9GZK4 316 aa17.27■□□□□ 0.35
RUNX3-202ENST00000338888 MTCH1Q9NZJ7 389 aa17.27■□□□□ 0.35
RUNX3-202ENST00000338888 CRIM1Q9NZV1 1036 aa17.27■□□□□ 0.35
RUNX3-202ENST00000338888 OR1A1Q9P1Q5 309 aa17.27■□□□□ 0.35
RUNX3-202ENST00000338888 PGPEP1LA6NFU8 196 aa17.26■□□□□ 0.35
RUNX3-202ENST00000338888 C11orf94C9JXX5 98 aa17.26■□□□□ 0.35
RUNX3-202ENST00000338888 C1QTNF9P0C862 333 aa17.26■□□□□ 0.35
RUNX3-202ENST00000338888 RPS16P62249 146 aaKnown RBP17.26■□□□□ 0.35
RUNX3-202ENST00000338888 FFAR4Q5NUL3 377 aa17.26■□□□□ 0.35
RUNX3-202ENST00000338888 RDH5Q92781 318 aa17.26■□□□□ 0.35
RUNX3-202ENST00000338888 PATZ1Q9HBE1 687 aaKnown RBP17.26■□□□□ 0.35
RUNX3-202ENST00000338888 TIMM9Q9Y5J7 89 aa17.26■□□□□ 0.35
RUNX3-202ENST00000338888 SOX8P57073 446 aa17.26■□□□□ 0.35
RUNX3-202ENST00000338888 HNRNPKP61978 463 aaKnown RBP eCLIP17.26■□□□□ 0.35
RUNX3-202ENST00000338888 KRTAP27-1Q3LI81 207 aa17.26■□□□□ 0.35
RUNX3-202ENST00000338888 TPTE2P1Q5T6R2 138 aa17.26■□□□□ 0.35
RUNX3-202ENST00000338888 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.25■□□□□ 0.35
RUNX3-202ENST00000338888 TRAV39A0A0B4J263 110 aa17.25■□□□□ 0.35
RUNX3-202ENST00000338888 MLNRO43193 412 aa17.25■□□□□ 0.35
RUNX3-202ENST00000338888 DKK1O94907 266 aa17.25■□□□□ 0.35
RUNX3-202ENST00000338888 CD27P26842 260 aa17.25■□□□□ 0.35
RUNX3-202ENST00000338888 CDKN1AP38936 164 aa17.25■□□□□ 0.35
RUNX3-202ENST00000338888 ZNF585BQ52M93 769 aa17.25■□□□□ 0.35
RUNX3-202ENST00000338888 MRPL52Q86TS9 123 aaKnown RBP17.25■□□□□ 0.35
RUNX3-202ENST00000338888 SGMS2Q8NHU3 365 aa17.25■□□□□ 0.35
RUNX3-202ENST00000338888 TECTBQ96PL2 329 aa17.25■□□□□ 0.35
RUNX3-202ENST00000338888 PRDM6Q9NQX0 595 aa17.25■□□□□ 0.35
RUNX3-202ENST00000338888 TEX43Q6ZNM6 134 aa17.25■□□□□ 0.35
RUNX3-202ENST00000338888 OR56B2PQ8NGI1 322 aa17.25■□□□□ 0.35
RUNX3-202ENST00000338888 VN1R17PQ8TDU5 208 aa17.25■□□□□ 0.35
RUNX3-202ENST00000338888 DERL1Q9BUN8 251 aa17.25■□□□□ 0.35
RUNX3-202ENST00000338888 IGLV2-14P01704 120 aa17.24■□□□□ 0.35
RUNX3-202ENST00000338888 IL6RP08887 468 aaPredicted RBP17.24■□□□□ 0.35
RUNX3-202ENST00000338888 HLA-BQ31612 363 aa17.24■□□□□ 0.35
RUNX3-202ENST00000338888 SGCZQ96LD1 299 aa17.24■□□□□ 0.35
RUNX3-202ENST00000338888 TMEM9BQ9NQ34 198 aa17.24■□□□□ 0.35
RUNX3-202ENST00000338888 TP53TG3Q9ULZ0 132 aa17.24■□□□□ 0.35
RUNX3-202ENST00000338888 RBM7Q9Y580 266 aaKnown RBP17.24■□□□□ 0.35
RUNX3-202ENST00000338888 SIAH2O43255 324 aa17.24■□□□□ 0.35
RUNX3-202ENST00000338888 TCF21O43680 179 aa17.24■□□□□ 0.35
RUNX3-202ENST00000338888 ZIC3O60481 467 aa17.24■□□□□ 0.35
RUNX3-202ENST00000338888 CELA2AP08217 269 aa17.24■□□□□ 0.35
RUNX3-202ENST00000338888 UBE2NP61088 152 aaKnown RBP17.24■□□□□ 0.35
RUNX3-202ENST00000338888 TMEM14EPQ6UXP3 125 aa17.24■□□□□ 0.35
RUNX3-202ENST00000338888 CARFQ8N187 725 aa17.24■□□□□ 0.35
RUNX3-202ENST00000338888 UBALD1Q8TB05 177 aa17.24■□□□□ 0.35
RUNX3-202ENST00000338888 ZNF488Q96MN9 340 aa17.24■□□□□ 0.35
RUNX3-202ENST00000338888 FOXB1Q99853 325 aa17.24■□□□□ 0.35
RUNX3-202ENST00000338888 HSPB9Q9BQS6 159 aa17.24■□□□□ 0.35
RUNX3-202ENST00000338888 OR51B6Q9H340 312 aa17.24■□□□□ 0.35
RUNX3-202ENST00000338888 DIDO1Q9BTC0 2240 aaKnown RBP17.24■□□□□ 0.35
RUNX3-202ENST00000338888 PIGBOS1A0A0B4J2F0 54 aa17.23■□□□□ 0.35
RUNX3-202ENST00000338888 TRAPPC2LH3BP13 241 aa17.23■□□□□ 0.35
RUNX3-202ENST00000338888 CCNOP22674 350 aa17.23■□□□□ 0.35
RUNX3-202ENST00000338888 UBE2G2P60604 165 aa17.23■□□□□ 0.35
RUNX3-202ENST00000338888 GNB1P62873 340 aa17.23■□□□□ 0.35
RUNX3-202ENST00000338888 TFF3Q07654 80 aa17.23■□□□□ 0.35
RUNX3-202ENST00000338888 TRA2AQ13595 282 aaKnown RBP eCLIP17.23■□□□□ 0.35
RUNX3-202ENST00000338888 CEACAM16Q2WEN9 425 aa17.23■□□□□ 0.35
RUNX3-202ENST00000338888 ZNF114Q8NC26 417 aa17.23■□□□□ 0.35
RUNX3-202ENST00000338888 OR5P3Q8WZ94 311 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms