RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 TCF23Q7RTU1 214 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 MRGPRGQ86SM5 289 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 OR52L2PQ8NGH6 319 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 M1APQ8TC57 530 aa12.06□□□□□ -0.48
PCDH8-201ENST00000338862 ACTR3CQ9C0K3 210 aaPredicted RBP12.06□□□□□ -0.48
PCDH8-201ENST00000338862 ZG16O60844 167 aa12.05□□□□□ -0.48
PCDH8-201ENST00000338862 KITLGP21583 273 aa12.05□□□□□ -0.48
PCDH8-201ENST00000338862 EPHA8P29322 1005 aaPredicted RBP12.05□□□□□ -0.48
PCDH8-201ENST00000338862 MAGEA5P43359 124 aa12.05□□□□□ -0.48
PCDH8-201ENST00000338862 KRTDAPP60985 99 aa12.05□□□□□ -0.48
PCDH8-201ENST00000338862 TAF15Q92804 592 aaKnown RBP eCLIP12.05□□□□□ -0.48
PCDH8-201ENST00000338862 DUSP13Q9UII6 198 aa12.05□□□□□ -0.48
PCDH8-201ENST00000338862 PSG11Q9UQ72 335 aa12.05□□□□□ -0.48
PCDH8-201ENST00000338862 SIT1Q9Y3P8 196 aa12.05□□□□□ -0.48
PCDH8-201ENST00000338862 SPTBN1Q01082 2364 aaKnown RBP12.05□□□□□ -0.48
PCDH8-201ENST00000338862 NTF3P20783 257 aa12.05□□□□□ -0.48
PCDH8-201ENST00000338862 FGF12P61328 243 aa12.05□□□□□ -0.48
PCDH8-201ENST00000338862 ID3Q02535 119 aa12.05□□□□□ -0.48
PCDH8-201ENST00000338862 PRR31Q5SQ13 230 aa12.05□□□□□ -0.48
PCDH8-201ENST00000338862 REC114Q7Z4M0 266 aa12.05□□□□□ -0.48
PCDH8-201ENST00000338862 ZNF573Q86YE8 665 aa12.05□□□□□ -0.48
PCDH8-201ENST00000338862 LURAP1LQ8IV03 231 aa12.05□□□□□ -0.48
PCDH8-201ENST00000338862 VKORC1L1Q8N0U8 176 aa12.05□□□□□ -0.48
PCDH8-201ENST00000338862 APOBEC3DQ96AK3 386 aaPredicted RBP12.05□□□□□ -0.48
PCDH8-201ENST00000338862 IMMP2LQ96T52 175 aa12.05□□□□□ -0.48
PCDH8-201ENST00000338862 IGHV1-45A0A0A0MS14 117 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 IGKV1-6A0A0C4DH72 117 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 COX5AP20674 150 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 CRYGSP22914 178 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 GNG3P63215 75 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 HIST1H3AP68431 136 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 TFF3Q07654 80 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 ARFGEF3Q5TH69 2177 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 RAB24Q969Q5 203 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 C10orf35Q96D05 121 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 TMEM9BQ9NQ34 198 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 DLL3Q9NYJ7 618 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 B4GALT7Q9UBV7 327 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 PTPRSQ13332 1948 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 AMBPP02760 352 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 UCP1P25874 307 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 HOXC12P31275 282 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 SSTP61278 116 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 HIST3H3Q16695 136 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 OR1L1Q8NH94 360 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 SDF2L1Q9HCN8 221 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 RYDENQ9NUL5 291 aaKnown RBP12.04□□□□□ -0.48
PCDH8-201ENST00000338862 LIN7CQ9NUP9 197 aaKnown RBP12.04□□□□□ -0.48
PCDH8-201ENST00000338862 LYZL6O75951 148 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 PAX5Q02548 391 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 PNRC1Q12796 327 aaPredicted RBP12.04□□□□□ -0.48
PCDH8-201ENST00000338862 HES3Q5TGS1 186 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 DDA1Q9BW61 102 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 PRDM13Q9H4Q3 707 aa12.04□□□□□ -0.48
PCDH8-201ENST00000338862 BOKQ9UMX3 212 aaPredicted RBP12.04□□□□□ -0.48
PCDH8-201ENST00000338862 MUC22E2RYF6 1773 aaPredicted RBP12.04□□□□□ -0.48
PCDH8-201ENST00000338862 FOXI3A8MTJ6 420 aaPredicted RBP12.03□□□□□ -0.48
PCDH8-201ENST00000338862 H0Y980 276 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 RAMP3O60896 148 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 SRD5A2P31213 254 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 HTD2P86397 168 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 FADS6Q8N9I5 356 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 PINX1Q96BK5 328 aaKnown RBP12.03□□□□□ -0.48
PCDH8-201ENST00000338862 A0A1B0GU03 582 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 UMODP07911 640 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 MGST1P10620 155 aaKnown RBP12.03□□□□□ -0.48
PCDH8-201ENST00000338862 COX6A1P12074 109 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 PRAMEF5Q5TYX0 476 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 PRAMEF6Q5VXH4 476 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 FAM90A2PQ658T7 463 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 Q6ZPA2 131 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 SGMS2Q8NHU3 365 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 FKBP11Q9NYL4 201 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 AKAP6Q13023 2319 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 SLC31A2O15432 143 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 ST8SIA5O15466 376 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 FCGR3BO75015 233 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 OR4A8P0C604 315 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 UCP3P55916 312 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 C17orf82Q86X59 251 aaPredicted RBP12.03□□□□□ -0.48
PCDH8-201ENST00000338862 SIGLEC12Q96PQ1 595 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 TBX15Q96SF7 602 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 OR2J1Q9GZK6 312 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 PARD6AQ9NPB6 346 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 ADAMTS9Q9P2N4 1935 aa12.03□□□□□ -0.48
PCDH8-201ENST00000338862 LRP5LA4QPB2 252 aa12.02□□□□□ -0.48
PCDH8-201ENST00000338862 CA11O75493 328 aa12.02□□□□□ -0.48
PCDH8-201ENST00000338862 PPP1CBP62140 327 aa12.02□□□□□ -0.48
PCDH8-201ENST00000338862 KIAA1644Q3SXP7 199 aa12.02□□□□□ -0.48
PCDH8-201ENST00000338862 DPPA3Q6W0C5 159 aa12.02□□□□□ -0.48
PCDH8-201ENST00000338862 ZNF664Q8N3J9 261 aa12.02□□□□□ -0.48
PCDH8-201ENST00000338862 LYPD6BQ8NI32 183 aa12.02□□□□□ -0.48
PCDH8-201ENST00000338862 BTF3L4Q96K17 158 aa12.02□□□□□ -0.48
PCDH8-201ENST00000338862 SCRT1Q9BWW7 348 aa12.02□□□□□ -0.48
PCDH8-201ENST00000338862 WNK2Q9Y3S1 2297 aa12.02□□□□□ -0.48
PCDH8-201ENST00000338862 WNT9BO14905 357 aa12.02□□□□□ -0.49
PCDH8-201ENST00000338862 CTSSP25774 331 aa12.02□□□□□ -0.49
PCDH8-201ENST00000338862 FOXO1Q12778 655 aa12.02□□□□□ -0.49
PCDH8-201ENST00000338862 SLC25A53Q5H9E4 307 aa12.02□□□□□ -0.49
PCDH8-201ENST00000338862 RPP25LQ8N5L8 163 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms