RNA–Protein interactions for RNA: ENST00000338758.11

PARVB-201, Transcript of parvin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVB, Length 5,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-201ENST00000338758 IFNL4K9M1U5 179 aa12.15□□□□□ -0.46
PARVB-201ENST00000338758 GAPDHP04406 335 aaKnown RBP12.15□□□□□ -0.46
PARVB-201ENST00000338758 P2RY1P47900 373 aa12.15□□□□□ -0.46
PARVB-201ENST00000338758 Q0VFX4 171 aa12.15□□□□□ -0.46
PARVB-201ENST00000338758 OR5I1Q13606 314 aa12.15□□□□□ -0.46
PARVB-201ENST00000338758 BTNL8Q6UX41 500 aa12.15□□□□□ -0.46
PARVB-201ENST00000338758 SH2D2AQ9NP31 389 aa12.15□□□□□ -0.46
PARVB-201ENST00000338758 PARD6AQ9NPB6 346 aa12.15□□□□□ -0.46
PARVB-201ENST00000338758 WSB1Q9Y6I7 421 aa12.15□□□□□ -0.46
PARVB-201ENST00000338758 ATRXP46100 2492 aa12.15□□□□□ -0.46
PARVB-201ENST00000338758 PPIAL4CA0A0B4J2A2 164 aa12.15□□□□□ -0.46
PARVB-201ENST00000338758 PPIAL4GP0DN37 164 aa12.15□□□□□ -0.46
PARVB-201ENST00000338758 ZNF439Q8NDP4 499 aa12.15□□□□□ -0.46
PARVB-201ENST00000338758 MEGF10Q96KG7 1140 aa12.15□□□□□ -0.46
PARVB-201ENST00000338758 CXorf58Q96LI9 332 aa12.15□□□□□ -0.46
PARVB-201ENST00000338758 CABLES2Q9BTV7 478 aa12.15□□□□□ -0.46
PARVB-201ENST00000338758 RAB19A4D1S5 217 aa12.15□□□□□ -0.47
PARVB-201ENST00000338758 VSIG10L2P0DP72 767 aa12.15□□□□□ -0.47
PARVB-201ENST00000338758 PTGDSP41222 190 aa12.15□□□□□ -0.47
PARVB-201ENST00000338758 FAM201AQ5SY85 155 aa12.15□□□□□ -0.47
PARVB-201ENST00000338758 GPR132Q9UNW8 380 aa12.15□□□□□ -0.47
PARVB-201ENST00000338758 RHBDL1O75783 438 aa12.14□□□□□ -0.47
PARVB-201ENST00000338758 AQP3Q92482 292 aa12.14□□□□□ -0.47
PARVB-201ENST00000338758 V9GYS6 101 aa12.14□□□□□ -0.47
PARVB-201ENST00000338758 RNASEK-C17orf49H0YIS7 233 aa12.14□□□□□ -0.47
PARVB-201ENST00000338758 BMI1P35226 326 aa12.14□□□□□ -0.47
PARVB-201ENST00000338758 CALHM1Q8IU99 346 aa12.14□□□□□ -0.47
PARVB-201ENST00000338758 REPIN1Q9BWE0 567 aaKnown RBP12.14□□□□□ -0.47
PARVB-201ENST00000338758 PLXNA3P51805 1871 aa12.14□□□□□ -0.47
PARVB-201ENST00000338758 HPRT1P00492 218 aa12.14□□□□□ -0.47
PARVB-201ENST00000338758 SNRNP40Q96DI7 357 aaKnown RBP12.14□□□□□ -0.47
PARVB-201ENST00000338758 IGHV3-21A0A0B4J1V1 117 aa12.14□□□□□ -0.47
PARVB-201ENST00000338758 FGF8P55075 233 aaPredicted RBP12.14□□□□□ -0.47
PARVB-201ENST00000338758 CLLU1Q5K131 121 aa12.14□□□□□ -0.47
PARVB-201ENST00000338758 SPNS3Q6ZMD2 512 aa12.14□□□□□ -0.47
PARVB-201ENST00000338758 OR1B1Q8NGR6 318 aa12.14□□□□□ -0.47
PARVB-201ENST00000338758 OR51I2Q9H344 312 aa12.14□□□□□ -0.47
PARVB-201ENST00000338758 IGKV3-7A0A075B6H7 116 aa12.13□□□□□ -0.47
PARVB-201ENST00000338758 A0A1W2PPQ1 181 aa12.13□□□□□ -0.47
PARVB-201ENST00000338758 GFRA1P56159 465 aa12.13□□□□□ -0.47
PARVB-201ENST00000338758 CTDSP1Q9GZU7 261 aa12.13□□□□□ -0.47
PARVB-201ENST00000338758 CHEK1O14757 476 aa12.13□□□□□ -0.47
PARVB-201ENST00000338758 SLC25A5P05141 298 aaKnown RBP12.13□□□□□ -0.47
PARVB-201ENST00000338758 C1QTNF5Q9BXJ0 243 aa12.13□□□□□ -0.47
PARVB-201ENST00000338758 C7orf66A4D0T2 115 aa12.13□□□□□ -0.47
PARVB-201ENST00000338758 S100A4P26447 101 aaKnown RBP12.13□□□□□ -0.47
PARVB-201ENST00000338758 NDUFA6P56556 154 aa12.13□□□□□ -0.47
PARVB-201ENST00000338758 TMEM88Q6PEY1 159 aa12.13□□□□□ -0.47
PARVB-201ENST00000338758 GRAMD2BQ96HH9 432 aa12.13□□□□□ -0.47
PARVB-201ENST00000338758 A0A1B0GTI1 187 aa12.13□□□□□ -0.47
PARVB-201ENST00000338758 SULT1A1P50225 295 aa12.13□□□□□ -0.47
PARVB-201ENST00000338758 FOXG1P55316 489 aaPredicted RBP12.13□□□□□ -0.47
PARVB-201ENST00000338758 EWSR1Q01844 656 aaKnown RBP eCLIP12.13□□□□□ -0.47
PARVB-201ENST00000338758 TBR1Q16650 682 aa12.13□□□□□ -0.47
PARVB-201ENST00000338758 MIOXQ9UGB7 285 aa12.13□□□□□ -0.47
PARVB-201ENST00000338758 CDRT15L2A8MXV6 281 aa12.12□□□□□ -0.47
PARVB-201ENST00000338758 FAM78BQ5VT40 261 aa12.12□□□□□ -0.47
PARVB-201ENST00000338758 ATP5SQ99766 215 aa12.12□□□□□ -0.47
PARVB-201ENST00000338758 XKRY2A2RUG3 117 aa12.12□□□□□ -0.47
PARVB-201ENST00000338758 MC5RP33032 325 aa12.12□□□□□ -0.47
PARVB-201ENST00000338758 GAMTQ14353 236 aa12.12□□□□□ -0.47
PARVB-201ENST00000338758 ZNF385CQ66K41 422 aaPredicted RBP12.12□□□□□ -0.47
PARVB-201ENST00000338758 OR1L4Q8NGR5 311 aa12.12□□□□□ -0.47
PARVB-201ENST00000338758 HLA-GP17693 338 aa12.12□□□□□ -0.47
PARVB-201ENST00000338758 SSTR5P35346 364 aa12.12□□□□□ -0.47
PARVB-201ENST00000338758 RPL27AP46776 148 aaKnown RBP12.12□□□□□ -0.47
PARVB-201ENST00000338758 UBE2L3P68036 154 aaKnown RBP12.12□□□□□ -0.47
PARVB-201ENST00000338758 KIAA0141Q14154 515 aaPredicted RBP12.12□□□□□ -0.47
PARVB-201ENST00000338758 PLAC9Q5JTB6 97 aa12.12□□□□□ -0.47
PARVB-201ENST00000338758 TMEM106BQ9NUM4 274 aa12.12□□□□□ -0.47
PARVB-201ENST00000338758 IDI2-AS1Q9NZ38 188 aa12.12□□□□□ -0.47
PARVB-201ENST00000338758 POMT1Q9Y6A1 747 aa12.12□□□□□ -0.47
PARVB-201ENST00000338758 HTR1DP28221 377 aa12.12□□□□□ -0.47
PARVB-201ENST00000338758 ERVFC1-1P60608 527 aa12.12□□□□□ -0.47
PARVB-201ENST00000338758 FOXF2Q12947 444 aa12.12□□□□□ -0.47
PARVB-201ENST00000338758 COMMD1Q8N668 190 aa12.12□□□□□ -0.47
PARVB-201ENST00000338758 PIMREGQ9BSJ6 248 aa12.12□□□□□ -0.47
PARVB-201ENST00000338758 OR51B2Q9Y5P1 312 aa12.12□□□□□ -0.47
PARVB-201ENST00000338758 SS18L1O75177 396 aaPredicted RBP12.12□□□□□ -0.47
PARVB-201ENST00000338758 TRIM77I1YAP6 450 aa12.11□□□□□ -0.47
PARVB-201ENST00000338758 DNASE2O00115 360 aaPredicted RBP12.11□□□□□ -0.47
PARVB-201ENST00000338758 CTRB1P17538 263 aa12.11□□□□□ -0.47
PARVB-201ENST00000338758 CTRB2Q6GPI1 263 aa12.11□□□□□ -0.47
PARVB-201ENST00000338758 ZNF66Q6ZN08 573 aa12.11□□□□□ -0.47
PARVB-201ENST00000338758 CHRDL1Q9BU40 450 aa12.11□□□□□ -0.47
PARVB-201ENST00000338758 SERTM2A0A1B0GWG4 89 aa12.11□□□□□ -0.47
PARVB-201ENST00000338758 DBX1A6NMT0 343 aa12.11□□□□□ -0.47
PARVB-201ENST00000338758 H3F3AP84243 136 aa12.11□□□□□ -0.47
PARVB-201ENST00000338758 OR8I2Q8N0Y5 310 aa12.11□□□□□ -0.47
PARVB-201ENST00000338758 ABHD12Q8N2K0 398 aa12.11□□□□□ -0.47
PARVB-201ENST00000338758 LOC105371242A0A075B767 164 aa12.11□□□□□ -0.47
PARVB-201ENST00000338758 MFNGO00587 321 aa12.11□□□□□ -0.47
PARVB-201ENST00000338758 SPP1P10451 314 aa12.11□□□□□ -0.47
PARVB-201ENST00000338758 MUC1P15941 1255 aaPredicted RBP12.11□□□□□ -0.47
PARVB-201ENST00000338758 UNC119Q13432 240 aa12.11□□□□□ -0.47
PARVB-201ENST00000338758 AARDQ4LEZ3 155 aa12.11□□□□□ -0.47
PARVB-201ENST00000338758 ZIC4Q8N9L1 334 aa12.11□□□□□ -0.47
PARVB-201ENST00000338758 RNASE6Q93091 150 aaKnown RBP12.11□□□□□ -0.47
PARVB-201ENST00000338758 ASCL3Q9NQ33 180 aa12.11□□□□□ -0.47
PARVB-201ENST00000338758 PPP1R2P9O14990 202 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms