RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 SAA2-SAA4A0A096LPE2 208 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 G3V318 75 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 ATP6V0E1O15342 81 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 HSPA12AO43301 675 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 CDK1P06493 297 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 SAA2P0DJI9 122 aaPredicted RBP8.31□□□□□ -1.08
CAPN3-202ENST00000337571 CHATP28329 748 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 PPIFP30405 207 aaKnown RBP8.31□□□□□ -1.08
CAPN3-202ENST00000337571 RANBP1P43487 201 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 ZNF616Q08AN1 781 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 C1orf100Q5SVJ3 147 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 FAM27D1Q5T7N8 215 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 OGFRL1Q5TC84 451 aaPredicted RBP8.31□□□□□ -1.08
CAPN3-202ENST00000337571 OR10K2Q6IF99 312 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 FAM71F2Q6NXP2 309 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 C5orf24Q7Z6I8 188 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 ODF3L1Q8IXM7 274 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 ZNF491Q8N8L2 437 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 NPBQ8NG41 125 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 ABHD5Q8WTS1 349 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 EDARADDQ8WWZ3 215 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 RITA1Q96K30 269 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 OR5B12Q96R08 314 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 URM1Q9BTM9 101 aaKnown RBP8.31□□□□□ -1.08
CAPN3-202ENST00000337571 KLK15Q9H2R5 256 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 SLC23A1Q9UHI7 598 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 SCOCQ9UIL1 159 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 RNF150Q9ULK6 438 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 ZNF256Q9Y2P7 627 aaPredicted RBP8.31□□□□□ -1.08
CAPN3-202ENST00000337571 LSM4Q9Y4Z0 139 aaKnown RBP8.31□□□□□ -1.08
CAPN3-202ENST00000337571 U3KQK5 164 aa8.31□□□□□ -1.08
CAPN3-202ENST00000337571 IGHV7-81A0A0B4J1V7 117 aa8.3□□□□□ -1.08
CAPN3-202ENST00000337571 A0A1W2PN81 502 aa8.3□□□□□ -1.08
CAPN3-202ENST00000337571 BPNT1O95861 308 aa8.3□□□□□ -1.08
CAPN3-202ENST00000337571 IGLV1-40P01703 118 aa8.3□□□□□ -1.08
CAPN3-202ENST00000337571 ZBTB25P24278 435 aa8.3□□□□□ -1.08
CAPN3-202ENST00000337571 CNTFRP26992 372 aa8.3□□□□□ -1.08
CAPN3-202ENST00000337571 CHRNA7P36544 502 aa8.3□□□□□ -1.08
CAPN3-202ENST00000337571 CEACAM6P40199 344 aa8.3□□□□□ -1.08
CAPN3-202ENST00000337571 RUNX1Q01196 453 aa8.3□□□□□ -1.08
CAPN3-202ENST00000337571 FHL3Q13643 280 aa8.3□□□□□ -1.08
CAPN3-202ENST00000337571 INSL4Q14641 139 aa8.3□□□□□ -1.08
CAPN3-202ENST00000337571 SPHARQ15513 63 aa8.3□□□□□ -1.08
CAPN3-202ENST00000337571 HMGN3Q15651 99 aa8.3□□□□□ -1.08
CAPN3-202ENST00000337571 RNLSQ5VYX0 342 aa8.3□□□□□ -1.08
CAPN3-202ENST00000337571 ZNF660Q6AZW8 331 aaPredicted RBP8.3□□□□□ -1.08
CAPN3-202ENST00000337571 LAIR2Q6ISS4 152 aa8.3□□□□□ -1.08
CAPN3-202ENST00000337571 MOB1BQ7L9L4 216 aa8.3□□□□□ -1.08
CAPN3-202ENST00000337571 LRRTM1Q86UE6 522 aa8.3□□□□□ -1.08
CAPN3-202ENST00000337571 ZNF429Q86V71 674 aa8.3□□□□□ -1.08
CAPN3-202ENST00000337571 OR6M1Q8NGM8 313 aa8.3□□□□□ -1.08
CAPN3-202ENST00000337571 FBLIM1Q8WUP2 373 aa8.3□□□□□ -1.08
CAPN3-202ENST00000337571 GNB4Q9HAV0 340 aa8.3□□□□□ -1.08
CAPN3-202ENST00000337571 PLGRKTQ9HBL7 147 aa8.3□□□□□ -1.08
CAPN3-202ENST00000337571 MGAT4AQ9UM21 535 aa8.3□□□□□ -1.08
CAPN3-202ENST00000337571 OR5H14A6NHG9 310 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 I3L521 148 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 RRHO14718 337 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 OVOL1O14753 267 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 SLC22A1O15245 554 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 RBBP9O75884 186 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 NDUFA3O95167 84 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 ARSBP15848 533 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 TRAM1Q15629 374 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 ECSCRQ19T08 205 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 C6orf141Q5SZD1 244 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 PYHIN1Q6K0P9 492 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 FAM131AQ6UXB0 335 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 TCTEX1D1Q8N7M0 179 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 MYOZ3Q8TDC0 251 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 UFD1Q92890 307 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 TMEM203Q969S6 136 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 RNF5Q99942 180 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 TM2D1Q9BX74 207 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 FKBP14Q9NWM8 211 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 ZNF221Q9UK13 617 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 FOXA2Q9Y261 457 aaPredicted RBP8.29□□□□□ -1.08
CAPN3-202ENST00000337571 WASHC3Q9Y3C0 194 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 SMAD5-AS1Q9Y6J3 95 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 A3GALT2U3KPV4 340 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 NBEAL2Q6ZNJ1 2754 aa8.29□□□□□ -1.08
CAPN3-202ENST00000337571 TMEM14DPA8MWL7 114 aa8.28□□□□□ -1.08
CAPN3-202ENST00000337571 ITGB1BP1O14713 200 aa8.28□□□□□ -1.08
CAPN3-202ENST00000337571 SAP30O75446 220 aa8.28□□□□□ -1.08
CAPN3-202ENST00000337571 ARL6IP5O75915 188 aa8.28□□□□□ -1.08
CAPN3-202ENST00000337571 NAPSAO96009 420 aa8.28□□□□□ -1.08
CAPN3-202ENST00000337571 HSMCR30P0CW71 290 aa8.28□□□□□ -1.08
CAPN3-202ENST00000337571 CT45A6P0DMU7 189 aa8.28□□□□□ -1.08
CAPN3-202ENST00000337571 CT45A5P0DMU8 189 aa8.28□□□□□ -1.08
CAPN3-202ENST00000337571 CT45A7P0DMV0 189 aa8.28□□□□□ -1.08
CAPN3-202ENST00000337571 GNB1P62873 340 aa8.28□□□□□ -1.08
CAPN3-202ENST00000337571 CX3CL1P78423 397 aa8.28□□□□□ -1.08
CAPN3-202ENST00000337571 MRPS15P82914 257 aaKnown RBP8.28□□□□□ -1.08
CAPN3-202ENST00000337571 KIAA0141Q14154 515 aaPredicted RBP8.28□□□□□ -1.08
CAPN3-202ENST00000337571 RPL39P5Q59GN2 51 aa8.28□□□□□ -1.08
CAPN3-202ENST00000337571 LIPKQ5VXJ0 399 aa8.28□□□□□ -1.08
CAPN3-202ENST00000337571 ZNF880Q6PDB4 577 aa8.28□□□□□ -1.08
CAPN3-202ENST00000337571 PPP1R27Q86WC6 154 aa8.28□□□□□ -1.08
CAPN3-202ENST00000337571 MINDY2Q8NBR6 621 aa8.28□□□□□ -1.08
CAPN3-202ENST00000337571 DCUN1D4Q92564 292 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms