RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 TBPP20226 339 aa12.42□□□□□ -0.42
SEC13-201ENST00000337354 ZNF816Q0VGE8 651 aaPredicted RBP12.42□□□□□ -0.42
SEC13-201ENST00000337354 CDK10Q15131 360 aa12.42□□□□□ -0.42
SEC13-201ENST00000337354 LRRC75BQ2VPJ9 315 aa12.42□□□□□ -0.42
SEC13-201ENST00000337354 ACTBL2Q562R1 376 aa12.42□□□□□ -0.42
SEC13-201ENST00000337354 FAM71F2Q6NXP2 309 aa12.42□□□□□ -0.42
SEC13-201ENST00000337354 DHRS11Q6UWP2 260 aa12.42□□□□□ -0.42
SEC13-201ENST00000337354 DYNAPQ8N1N2 210 aa12.42□□□□□ -0.42
SEC13-201ENST00000337354 OR5H2Q8NGV7 314 aa12.42□□□□□ -0.42
SEC13-201ENST00000337354 GIMAP1Q8WWP7 306 aa12.42□□□□□ -0.42
SEC13-201ENST00000337354 S1PR3Q99500 378 aa12.42□□□□□ -0.42
SEC13-201ENST00000337354 SSX3Q99909 188 aa12.42□□□□□ -0.42
SEC13-201ENST00000337354 IFI27L2Q9H2X8 130 aa12.42□□□□□ -0.42
SEC13-201ENST00000337354 ABCB10Q9NRK6 738 aa12.42□□□□□ -0.42
SEC13-201ENST00000337354 PTTG2Q9NZH5 202 aa12.42□□□□□ -0.42
SEC13-201ENST00000337354 OR2W1Q9Y3N9 320 aa12.42□□□□□ -0.42
SEC13-201ENST00000337354 V9GYH0 126 aa12.42□□□□□ -0.42
SEC13-201ENST00000337354 HSD17B6O14756 317 aa12.41□□□□□ -0.42
SEC13-201ENST00000337354 ST8SIA5O15466 376 aa12.41□□□□□ -0.42
SEC13-201ENST00000337354 HOXA3O43365 443 aaPredicted RBP12.41□□□□□ -0.42
SEC13-201ENST00000337354 LANCL1O43813 399 aa12.41□□□□□ -0.42
SEC13-201ENST00000337354 FCER2P06734 321 aa12.41□□□□□ -0.42
SEC13-201ENST00000337354 HLA-DMAP28067 261 aa12.41□□□□□ -0.42
SEC13-201ENST00000337354 DYRK1AQ13627 763 aa12.41□□□□□ -0.42
SEC13-201ENST00000337354 ODF3L1Q8IXM7 274 aa12.41□□□□□ -0.42
SEC13-201ENST00000337354 ZNF221Q9UK13 617 aa12.41□□□□□ -0.42
SEC13-201ENST00000337354 RBMX2Q9Y388 322 aaKnown RBP12.41□□□□□ -0.42
SEC13-201ENST00000337354 RBM7Q9Y580 266 aaKnown RBP12.41□□□□□ -0.42
SEC13-201ENST00000337354 DSCAML1Q8TD84 2053 aa12.4□□□□□ -0.42
SEC13-201ENST00000337354 ZNF736B4DX44 427 aaPredicted RBP12.4□□□□□ -0.42
SEC13-201ENST00000337354 TUSC2O75896 110 aa12.4□□□□□ -0.42
SEC13-201ENST00000337354 SLC22A5O76082 557 aa12.4□□□□□ -0.42
SEC13-201ENST00000337354 OR8U9P0C7N5 309 aa12.4□□□□□ -0.42
SEC13-201ENST00000337354 NFYAP23511 347 aaPredicted RBP12.4□□□□□ -0.42
SEC13-201ENST00000337354 LUMP51884 338 aaPredicted RBP12.4□□□□□ -0.42
SEC13-201ENST00000337354 TAS2R19P59542 299 aa12.4□□□□□ -0.42
SEC13-201ENST00000337354 DGCR2P98153 550 aa12.4□□□□□ -0.42
SEC13-201ENST00000337354 ZNF45Q02386 682 aa12.4□□□□□ -0.42
SEC13-201ENST00000337354 SLC9A3R2Q15599 337 aa12.4□□□□□ -0.42
SEC13-201ENST00000337354 PYDC2Q56P42 97 aa12.4□□□□□ -0.42
SEC13-201ENST00000337354 ZNF833PQ6ZTB9 187 aa12.4□□□□□ -0.42
SEC13-201ENST00000337354 TGIF2LXQ8IUE1 241 aa12.4□□□□□ -0.42
SEC13-201ENST00000337354 ZDHHC22Q8N966 263 aa12.4□□□□□ -0.42
SEC13-201ENST00000337354 TMEM229BQ8NBD8 167 aa12.4□□□□□ -0.42
SEC13-201ENST00000337354 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.4□□□□□ -0.42
SEC13-201ENST00000337354 OR6F1Q8NGZ6 308 aa12.4□□□□□ -0.42
SEC13-201ENST00000337354 OR8U1Q8NH10 309 aa12.4□□□□□ -0.42
SEC13-201ENST00000337354 RTN4IP1Q8WWV3 396 aaPredicted RBP12.4□□□□□ -0.42
SEC13-201ENST00000337354 PARP12Q9H0J9 701 aaKnown RBP12.4□□□□□ -0.42
SEC13-201ENST00000337354 IGHV4-59P01825 116 aa12.39□□□□□ -0.43
SEC13-201ENST00000337354 PMP2P02689 132 aa12.39□□□□□ -0.43
SEC13-201ENST00000337354 CSF1P09603 554 aa12.39□□□□□ -0.43
SEC13-201ENST00000337354 FCGR2CP31995 323 aa12.39□□□□□ -0.43
SEC13-201ENST00000337354 HRH1P35367 487 aa12.39□□□□□ -0.43
SEC13-201ENST00000337354 GPR12P47775 334 aa12.39□□□□□ -0.43
SEC13-201ENST00000337354 RFX2P48378 723 aa12.39□□□□□ -0.43
SEC13-201ENST00000337354 SRSF2Q01130 221 aaKnown RBP12.39□□□□□ -0.43
SEC13-201ENST00000337354 HABP2Q14520 560 aaPredicted RBP12.39□□□□□ -0.43
SEC13-201ENST00000337354 VAX1Q5SQQ9 334 aa12.39□□□□□ -0.43
SEC13-201ENST00000337354 THNSL2Q86YJ6 484 aa12.39□□□□□ -0.43
SEC13-201ENST00000337354 ZFAND2BQ8WV99 257 aa12.39□□□□□ -0.43
SEC13-201ENST00000337354 ABHD14BQ96IU4 210 aa12.39□□□□□ -0.43
SEC13-201ENST00000337354 THAP7Q9BT49 309 aaPredicted RBP12.39□□□□□ -0.43
SEC13-201ENST00000337354 EHFQ9NZC4 300 aa12.39□□□□□ -0.43
SEC13-201ENST00000337354 PITPNC1Q9UKF7 332 aa12.39□□□□□ -0.43
SEC13-201ENST00000337354 RNF150Q9ULK6 438 aa12.39□□□□□ -0.43
SEC13-201ENST00000337354 KIAA2026Q5HYC2 2103 aa12.38□□□□□ -0.43
SEC13-201ENST00000337354 SAA2-SAA4A0A096LPE2 208 aa12.38□□□□□ -0.43
SEC13-201ENST00000337354 IGHV1-3A0A0C4DH29 117 aa12.38□□□□□ -0.43
SEC13-201ENST00000337354 A0A1W2PPI3 338 aa12.38□□□□□ -0.43
SEC13-201ENST00000337354 DNAJC9-AS1A6NH13 148 aa12.38□□□□□ -0.43
SEC13-201ENST00000337354 TRIM77I1YAP6 450 aa12.38□□□□□ -0.43
SEC13-201ENST00000337354 VENTXO95231 258 aa12.38□□□□□ -0.43
SEC13-201ENST00000337354 FAM106CPP0CH98 169 aa12.38□□□□□ -0.43
SEC13-201ENST00000337354 SAA2P0DJI9 122 aaPredicted RBP12.38□□□□□ -0.43
SEC13-201ENST00000337354 DIAPH2-AS1Q14236 149 aa12.38□□□□□ -0.43
SEC13-201ENST00000337354 ZNF79Q15937 498 aa12.38□□□□□ -0.43
SEC13-201ENST00000337354 PLA1AQ53H76 456 aa12.38□□□□□ -0.43
SEC13-201ENST00000337354 RNASE12Q5GAN4 147 aaKnown RBP12.38□□□□□ -0.43
SEC13-201ENST00000337354 RNASE10Q5GAN6 216 aaKnown RBP12.38□□□□□ -0.43
SEC13-201ENST00000337354 C16orf87Q6PH81 154 aa12.38□□□□□ -0.43
SEC13-201ENST00000337354 LIAT1Q6ZQX7 453 aa12.38□□□□□ -0.43
SEC13-201ENST00000337354 TMEM17Q86X19 198 aa12.38□□□□□ -0.43
SEC13-201ENST00000337354 Q8N402 240 aa12.38□□□□□ -0.43
SEC13-201ENST00000337354 GDPD1Q8N9F7 314 aa12.38□□□□□ -0.43
SEC13-201ENST00000337354 PIFOQ8TCI5 191 aa12.38□□□□□ -0.43
SEC13-201ENST00000337354 ZNF251Q9BRH9 671 aa12.38□□□□□ -0.43
SEC13-201ENST00000337354 ESM1Q9NQ30 184 aa12.38□□□□□ -0.43
SEC13-201ENST00000337354 FAM90A9PA6NNJ1 464 aa12.37□□□□□ -0.43
SEC13-201ENST00000337354 RNF212BA8MTL3 300 aa12.37□□□□□ -0.43
SEC13-201ENST00000337354 H3BUX3 64 aa12.37□□□□□ -0.43
SEC13-201ENST00000337354 TIMM23O14925 209 aa12.37□□□□□ -0.43
SEC13-201ENST00000337354 PPYP01298 95 aa12.37□□□□□ -0.43
SEC13-201ENST00000337354 CD74P04233 296 aa12.37□□□□□ -0.43
SEC13-201ENST00000337354 CD3DP04234 171 aa12.37□□□□□ -0.43
SEC13-201ENST00000337354 IFNA6P05013 189 aa12.37□□□□□ -0.43
SEC13-201ENST00000337354 RNASE1P07998 156 aaKnown RBP12.37□□□□□ -0.43
SEC13-201ENST00000337354 PAX6P26367 422 aa12.37□□□□□ -0.43
SEC13-201ENST00000337354 CD1BP29016 333 aa12.37□□□□□ -0.43
SEC13-201ENST00000337354 REG1BP48304 166 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms