RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 OR2J1Q9GZK6 312 aa11.82□□□□□ -0.52
SF1-202ENST00000334944 SLC2A9Q9NRM0 540 aa11.82□□□□□ -0.52
SF1-202ENST00000334944 OTOGLQ3ZCN5 2332 aa11.82□□□□□ -0.52
SF1-202ENST00000334944 DCHS1Q96JQ0 3298 aa11.82□□□□□ -0.52
SF1-202ENST00000334944 TRAV39A0A0B4J263 110 aa11.82□□□□□ -0.52
SF1-202ENST00000334944 ZNF732B4DXR9 585 aa11.82□□□□□ -0.52
SF1-202ENST00000334944 ST8SIA3O43173 380 aa11.82□□□□□ -0.52
SF1-202ENST00000334944 PDCD6O75340 191 aa11.82□□□□□ -0.52
SF1-202ENST00000334944 UBALD1Q8TB05 177 aa11.82□□□□□ -0.52
SF1-202ENST00000334944 C22orf15Q8WYQ4 148 aa11.82□□□□□ -0.52
SF1-202ENST00000334944 ZPBPQ9BS86 351 aa11.82□□□□□ -0.52
SF1-202ENST00000334944 C1QTNF5Q9BXJ0 243 aa11.82□□□□□ -0.52
SF1-202ENST00000334944 A0A1B0GW64 132 aa11.81□□□□□ -0.52
SF1-202ENST00000334944 PHF1O43189 567 aaPredicted RBP11.81□□□□□ -0.52
SF1-202ENST00000334944 CTSDP07339 412 aaPredicted RBP11.81□□□□□ -0.52
SF1-202ENST00000334944 RND2P52198 227 aa11.81□□□□□ -0.52
SF1-202ENST00000334944 VHLLQ6RSH7 139 aa11.81□□□□□ -0.52
SF1-202ENST00000334944 MYPOPQ86VE0 399 aaPredicted RBP11.81□□□□□ -0.52
SF1-202ENST00000334944 MCEMP1Q8IX19 187 aa11.81□□□□□ -0.52
SF1-202ENST00000334944 OR1L6Q8NGR2 347 aa11.81□□□□□ -0.52
SF1-202ENST00000334944 TRBV24-1A0A075B6N3 115 aa11.81□□□□□ -0.52
SF1-202ENST00000334944 PPP5D1E7EU14 171 aa11.81□□□□□ -0.52
SF1-202ENST00000334944 H3BP45 60 aa11.81□□□□□ -0.52
SF1-202ENST00000334944 SSSCA1O60232 199 aa11.81□□□□□ -0.52
SF1-202ENST00000334944 ARL6IP1Q15041 203 aa11.81□□□□□ -0.52
SF1-202ENST00000334944 SPIN3Q5JUX0 258 aa11.81□□□□□ -0.52
SF1-202ENST00000334944 GCNT2Q8N0V5 402 aa11.81□□□□□ -0.52
SF1-202ENST00000334944 EXTL1Q92935 676 aa11.81□□□□□ -0.52
SF1-202ENST00000334944 SRD5A3Q9H8P0 318 aa11.81□□□□□ -0.52
SF1-202ENST00000334944 MSL2Q9HCI7 577 aa11.81□□□□□ -0.52
SF1-202ENST00000334944 GLRX2Q9NS18 164 aa11.81□□□□□ -0.52
SF1-202ENST00000334944 VAX2Q9UIW0 290 aa11.81□□□□□ -0.52
SF1-202ENST00000334944 ICE1Q9Y2F5 2266 aa11.81□□□□□ -0.52
SF1-202ENST00000334944 HS3ST1O14792 307 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 SCTP09683 121 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 HOXA4Q00056 320 aaPredicted RBP11.8□□□□□ -0.52
SF1-202ENST00000334944 MTCH1Q9NZJ7 389 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 DOCK11Q5JSL3 2073 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 ZFHX2Q9C0A1 2572 aaPredicted RBP11.8□□□□□ -0.52
SF1-202ENST00000334944 CEBPZOSA8MTT3 80 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 HMGB3O15347 200 aaKnown RBP11.8□□□□□ -0.52
SF1-202ENST00000334944 RAB7AP51149 207 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 DYNLT3P51808 116 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 FBXW9Q5XUX1 488 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 SSX7Q7RTT5 188 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 LGI3Q8N145 548 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 OR2C3Q8N628 320 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 RDH5Q92781 318 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 MS4A10Q96PG2 267 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 ZNF286AQ9HBT8 521 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 AURKAIP1Q9NWT8 199 aaPredicted RBP11.8□□□□□ -0.52
SF1-202ENST00000334944 ABI3Q9P2A4 366 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 KIR2DL5BA0A0G2JN68 375 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 KIR2DL5BA0A0G2JPC4 375 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 OPN1MWP04001 364 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 OPN1MW2P0DN77 364 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 OPN1MW3P0DN78 364 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 KIR2DL5AQ8N109 375 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 RPUSD4Q96CM3 377 aaKnown RBP11.8□□□□□ -0.52
SF1-202ENST00000334944 BOD1Q96IK1 185 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 TP53RKQ96S44 253 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 REPIN1Q9BWE0 567 aaKnown RBP11.8□□□□□ -0.52
SF1-202ENST00000334944 VSIRQ9H7M9 311 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 NAA60Q9H7X0 242 aa11.8□□□□□ -0.52
SF1-202ENST00000334944 CBY3A6NI87 242 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 CCL25O15444 150 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 RRP8O43159 456 aaKnown RBP11.79□□□□□ -0.52
SF1-202ENST00000334944 SP1P08047 785 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 HNF1AP20823 631 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 CHRNB4P30926 498 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 TLE4Q04727 773 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 ZNF154Q13106 437 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 EIF3IQ13347 325 aaKnown RBP11.79□□□□□ -0.52
SF1-202ENST00000334944 GNMTQ14749 295 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 GPR157Q5UAW9 335 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 ASCL4Q6XD76 172 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 PRDM14Q9GZV8 571 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 SDF2L1Q9HCN8 221 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 RNF24Q9Y225 148 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 IGKV3D-15A0A087WSY6 115 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 LOC102723971A0A1B0GUV8 181 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 CELA3BP08861 270 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 IL6RP08887 468 aaPredicted RBP11.79□□□□□ -0.52
SF1-202ENST00000334944 PTTG1IPP53801 180 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 HERV-K104P61576 105 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 TMEM187Q14656 261 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 MMDQ15546 238 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 MAJINQ3KP22 176 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 ERASQ7Z444 233 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 GBGT1Q8N5D6 347 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 TMEM45BQ96B21 275 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 TUBG2Q9NRH3 451 aa11.79□□□□□ -0.52
SF1-202ENST00000334944 NKX2-6A6NCS4 301 aa11.78□□□□□ -0.52
SF1-202ENST00000334944 ZNF883P0CG24 379 aa11.78□□□□□ -0.52
SF1-202ENST00000334944 CA6P23280 308 aa11.78□□□□□ -0.52
SF1-202ENST00000334944 GALR1P47211 349 aa11.78□□□□□ -0.52
SF1-202ENST00000334944 FAM3BP58499 235 aaPredicted RBP11.78□□□□□ -0.52
SF1-202ENST00000334944 CXorf66Q5JRM2 361 aaPredicted RBP11.78□□□□□ -0.52
SF1-202ENST00000334944 SMDT1Q9H4I9 107 aa11.78□□□□□ -0.52
SF1-202ENST00000334944 LOC102724200A0A096LPH7 203 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms