RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 C5orf66Q9H5L9 145 aa17.52■□□□□ 0.4
TPM1-204ENST00000334895 CCL28Q9NRJ3 127 aa17.52■□□□□ 0.4
TPM1-204ENST00000334895 COPZ2Q9P299 210 aa17.52■□□□□ 0.4
TPM1-204ENST00000334895 IGLV1-47P01700 117 aa17.51■□□□□ 0.39
TPM1-204ENST00000334895 GATA3P23771 443 aa17.51■□□□□ 0.39
TPM1-204ENST00000334895 SURF2Q15527 256 aaPredicted RBP17.51■□□□□ 0.39
TPM1-204ENST00000334895 CYB5R2Q6BCY4 276 aa17.51■□□□□ 0.39
TPM1-204ENST00000334895 ZNF818PQ6ZRF7 136 aa17.51■□□□□ 0.39
TPM1-204ENST00000334895 C1orf229Q6ZS94 237 aaPredicted RBP17.51■□□□□ 0.39
TPM1-204ENST00000334895 ODF3L1Q8IXM7 274 aa17.51■□□□□ 0.39
TPM1-204ENST00000334895 CENPSQ8N2Z9 138 aa17.51■□□□□ 0.39
TPM1-204ENST00000334895 LINC00311Q8N616 119 aa17.51■□□□□ 0.39
TPM1-204ENST00000334895 OR11H6Q8NGC7 330 aa17.51■□□□□ 0.39
TPM1-204ENST00000334895 C18orf12Q96KH6 178 aa17.51■□□□□ 0.39
TPM1-204ENST00000334895 RTBDNQ9BSG5 229 aaPredicted RBP17.51■□□□□ 0.39
TPM1-204ENST00000334895 RSRP1Q9BUV0 290 aa17.51■□□□□ 0.39
TPM1-204ENST00000334895 OR2D2Q9H210 308 aa17.51■□□□□ 0.39
TPM1-204ENST00000334895 TRAV6A0A075B6T7 132 aa17.5■□□□□ 0.39
TPM1-204ENST00000334895 ARPC1BO15143 372 aaKnown RBP17.5■□□□□ 0.39
TPM1-204ENST00000334895 AVPP01185 164 aa17.5■□□□□ 0.39
TPM1-204ENST00000334895 PGAM2P15259 253 aa17.5■□□□□ 0.39
TPM1-204ENST00000334895 KRTAP1-1Q07627 177 aa17.5■□□□□ 0.39
TPM1-204ENST00000334895 FAHD2BQ6P2I3 314 aaPredicted RBP17.5■□□□□ 0.39
TPM1-204ENST00000334895 PDZD9Q8IXQ8 264 aa17.5■□□□□ 0.39
TPM1-204ENST00000334895 ZDHHC22Q8N966 263 aa17.5■□□□□ 0.39
TPM1-204ENST00000334895 OR13D1Q8NGV5 346 aa17.5■□□□□ 0.39
TPM1-204ENST00000334895 FAHD2AQ96GK7 314 aa17.5■□□□□ 0.39
TPM1-204ENST00000334895 C7orf69Q9H7B7 122 aa17.5■□□□□ 0.39
TPM1-204ENST00000334895 RBM7Q9Y580 266 aaKnown RBP17.5■□□□□ 0.39
TPM1-204ENST00000334895 NUBP2Q9Y5Y2 271 aa17.5■□□□□ 0.39
TPM1-204ENST00000334895 AUP1Q9Y679 476 aa17.5■□□□□ 0.39
TPM1-204ENST00000334895 CSPG4Q6UVK1 2322 aa17.5■□□□□ 0.39
TPM1-204ENST00000334895 HSD17B6O14756 317 aa17.5■□□□□ 0.39
TPM1-204ENST00000334895 PROP1O75360 226 aa17.5■□□□□ 0.39
TPM1-204ENST00000334895 ECI1P42126 302 aa17.5■□□□□ 0.39
TPM1-204ENST00000334895 RAB7AP51149 207 aa17.5■□□□□ 0.39
TPM1-204ENST00000334895 TRIM16LQ309B1 348 aa17.5■□□□□ 0.39
TPM1-204ENST00000334895 LURAP1LQ8IV03 231 aa17.5■□□□□ 0.39
TPM1-204ENST00000334895 SLC38A6Q8IZM9 456 aa17.5■□□□□ 0.39
TPM1-204ENST00000334895 FAM216AQ8WUB2 273 aa17.5■□□□□ 0.39
TPM1-204ENST00000334895 HEXA-AS1Q9H8Q6 139 aa17.5■□□□□ 0.39
TPM1-204ENST00000334895 KCNS2Q9ULS6 477 aa17.5■□□□□ 0.39
TPM1-204ENST00000334895 ODF3BA8MYP8 253 aa17.49■□□□□ 0.39
TPM1-204ENST00000334895 CTSDP07339 412 aaPredicted RBP17.49■□□□□ 0.39
TPM1-204ENST00000334895 HLA-DRB5Q30154 266 aa17.49■□□□□ 0.39
TPM1-204ENST00000334895 ZNF626Q68DY1 528 aa17.49■□□□□ 0.39
TPM1-204ENST00000334895 PLET1Q6UQ28 207 aa17.49■□□□□ 0.39
TPM1-204ENST00000334895 LYG1Q8N1E2 194 aa17.49■□□□□ 0.39
TPM1-204ENST00000334895 DRAM1Q8N682 238 aa17.49■□□□□ 0.39
TPM1-204ENST00000334895 ZNF645Q8N7E2 425 aa17.49■□□□□ 0.39
TPM1-204ENST00000334895 ADAD2Q8NCV1 583 aaKnown RBP17.49■□□□□ 0.39
TPM1-204ENST00000334895 BEND2Q8NDZ0 799 aa17.49■□□□□ 0.39
TPM1-204ENST00000334895 OR4P4Q8NGL7 312 aa17.49■□□□□ 0.39
TPM1-204ENST00000334895 LHX4Q969G2 390 aa17.49■□□□□ 0.39
TPM1-204ENST00000334895 ZNF251Q9BRH9 671 aa17.49■□□□□ 0.39
TPM1-204ENST00000334895 SAA2-SAA4A0A096LPE2 208 aa17.48■□□□□ 0.39
TPM1-204ENST00000334895 SAA2P0DJI9 122 aaPredicted RBP17.48■□□□□ 0.39
TPM1-204ENST00000334895 LDLRAD2Q5SZI1 272 aa17.48■□□□□ 0.39
TPM1-204ENST00000334895 NCR3LG1Q68D85 454 aa17.48■□□□□ 0.39
TPM1-204ENST00000334895 TMEM230Q96A57 120 aa17.48■□□□□ 0.39
TPM1-204ENST00000334895 GPHA2Q96T91 129 aa17.48■□□□□ 0.39
TPM1-204ENST00000334895 SMR3AQ99954 134 aa17.48■□□□□ 0.39
TPM1-204ENST00000334895 MARVELD1Q9BSK0 173 aa17.48■□□□□ 0.39
TPM1-204ENST00000334895 SDHAF2Q9NX18 166 aa17.48■□□□□ 0.39
TPM1-204ENST00000334895 TLN2Q9Y4G6 2542 aa17.48■□□□□ 0.39
TPM1-204ENST00000334895 TOR1AO14656 332 aa17.47■□□□□ 0.39
TPM1-204ENST00000334895 RLN1P04808 185 aa17.47■□□□□ 0.39
TPM1-204ENST00000334895 H2AFB2P0C5Z0 115 aa17.47■□□□□ 0.39
TPM1-204ENST00000334895 ANXA7P20073 488 aaKnown RBP17.47■□□□□ 0.39
TPM1-204ENST00000334895 GPR12P47775 334 aa17.47■□□□□ 0.39
TPM1-204ENST00000334895 RAB25P57735 213 aa17.47■□□□□ 0.39
TPM1-204ENST00000334895 PHLDA2Q53GA4 152 aa17.47■□□□□ 0.39
TPM1-204ENST00000334895 RPL39P5Q59GN2 51 aa17.47■□□□□ 0.39
TPM1-204ENST00000334895 TMED4Q7Z7H5 227 aa17.47■□□□□ 0.39
TPM1-204ENST00000334895 BVESQ8NE79 360 aa17.47■□□□□ 0.39
TPM1-204ENST00000334895 ZFAND1Q8TCF1 268 aa17.47■□□□□ 0.39
TPM1-204ENST00000334895 TEP1Q99973 2627 aaKnown RBP17.47■□□□□ 0.39
TPM1-204ENST00000334895 SLC2A9Q9NRM0 540 aa17.47■□□□□ 0.39
TPM1-204ENST00000334895 CENPVL3A0A0U1RRI6 287 aa17.47■□□□□ 0.39
TPM1-204ENST00000334895 A0A1W2PRD5 423 aa17.47■□□□□ 0.39
TPM1-204ENST00000334895 A0A1W2PRF3 423 aa17.47■□□□□ 0.39
TPM1-204ENST00000334895 A0A1W2PRM7 423 aa17.47■□□□□ 0.39
TPM1-204ENST00000334895 J3QLI3 93 aa17.47■□□□□ 0.39
TPM1-204ENST00000334895 GPR31O00270 319 aa17.47■□□□□ 0.39
TPM1-204ENST00000334895 EIF4EBP1Q13541 118 aaPredicted RBP17.47■□□□□ 0.39
TPM1-204ENST00000334895 LPCAT3Q6P1A2 487 aa17.47■□□□□ 0.39
TPM1-204ENST00000334895 MINDY2Q8NBR6 621 aa17.47■□□□□ 0.39
TPM1-204ENST00000334895 OR10X1Q8NGY0 326 aa17.47■□□□□ 0.39
TPM1-204ENST00000334895 SCGB3A2Q96PL1 93 aa17.47■□□□□ 0.39
TPM1-204ENST00000334895 GAB2Q9UQC2 676 aa17.47■□□□□ 0.39
TPM1-204ENST00000334895 ARG1P05089 322 aa17.46■□□□□ 0.39
TPM1-204ENST00000334895 VSIG10L2P0DP72 767 aa17.46■□□□□ 0.39
TPM1-204ENST00000334895 MECP2P51608 486 aaKnown RBP17.46■□□□□ 0.39
TPM1-204ENST00000334895 UBE2E1P51965 193 aa17.46■□□□□ 0.39
TPM1-204ENST00000334895 ZNF137PP52743 207 aa17.46■□□□□ 0.39
TPM1-204ENST00000334895 PRRX1P54821 245 aa17.46■□□□□ 0.39
TPM1-204ENST00000334895 PIGPP57054 158 aa17.46■□□□□ 0.39
TPM1-204ENST00000334895 DIAPH2-AS1Q14236 149 aa17.46■□□□□ 0.39
TPM1-204ENST00000334895 CAPSLQ8WWF8 208 aa17.46■□□□□ 0.39
TPM1-204ENST00000334895 ST6GALNAC6Q969X2 333 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms