RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 FAM210BQ96KR6 192 aa10.4□□□□□ -0.74
VPS33B-201ENST00000333371 CABLES2Q9BTV7 478 aa10.4□□□□□ -0.74
VPS33B-201ENST00000333371 HCFC1P51610 2035 aa10.4□□□□□ -0.74
VPS33B-201ENST00000333371 CDIPTO14735 213 aa10.4□□□□□ -0.74
VPS33B-201ENST00000333371 S100A2P29034 98 aa10.4□□□□□ -0.74
VPS33B-201ENST00000333371 MDH2P40926 338 aaKnown RBP10.4□□□□□ -0.74
VPS33B-201ENST00000333371 CLN3Q13286 438 aa10.4□□□□□ -0.74
VPS33B-201ENST00000333371 WDR25Q64LD2 544 aaPredicted RBP10.4□□□□□ -0.74
VPS33B-201ENST00000333371 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.4□□□□□ -0.74
VPS33B-201ENST00000333371 CXorf67Q86X51 503 aaPredicted RBP10.4□□□□□ -0.74
VPS33B-201ENST00000333371 DRAM1Q8N682 238 aa10.4□□□□□ -0.74
VPS33B-201ENST00000333371 NECAP1Q8NC96 275 aa10.4□□□□□ -0.74
VPS33B-201ENST00000333371 SNIP1Q8TAD8 396 aaKnown RBP10.4□□□□□ -0.74
VPS33B-201ENST00000333371 GATAD1Q8WUU5 269 aa10.4□□□□□ -0.74
VPS33B-201ENST00000333371 NDUFS6O75380 124 aaKnown RBP10.39□□□□□ -0.75
VPS33B-201ENST00000333371 PGA5P0DJD9 388 aa10.39□□□□□ -0.75
VPS33B-201ENST00000333371 COX5BP10606 129 aa10.39□□□□□ -0.75
VPS33B-201ENST00000333371 ARR3P36575 388 aa10.39□□□□□ -0.75
VPS33B-201ENST00000333371 SPINK9Q5DT21 86 aa10.39□□□□□ -0.75
VPS33B-201ENST00000333371 ZNF808Q8N4W9 903 aaPredicted RBP10.39□□□□□ -0.75
VPS33B-201ENST00000333371 SCCPDHQ8NBX0 429 aa10.39□□□□□ -0.75
VPS33B-201ENST00000333371 DEFB127Q9H1M4 99 aa10.39□□□□□ -0.75
VPS33B-201ENST00000333371 RIMS4Q9H426 269 aaPredicted RBP10.39□□□□□ -0.75
VPS33B-201ENST00000333371 CISD1Q9NZ45 108 aaKnown RBP10.39□□□□□ -0.75
VPS33B-201ENST00000333371 SMG1Q96Q15 3661 aaKnown RBP10.39□□□□□ -0.75
VPS33B-201ENST00000333371 TRBV6-6A0A0A6YYG2 114 aa10.39□□□□□ -0.75
VPS33B-201ENST00000333371 MAP1LC3B2A6NCE7 125 aa10.39□□□□□ -0.75
VPS33B-201ENST00000333371 MCEMP1Q8IX19 187 aa10.39□□□□□ -0.75
VPS33B-201ENST00000333371 WDYHV1Q96HA8 205 aa10.39□□□□□ -0.75
VPS33B-201ENST00000333371 OR2J1Q9GZK6 312 aa10.39□□□□□ -0.75
VPS33B-201ENST00000333371 MAP1LC3BQ9GZQ8 125 aa10.39□□□□□ -0.75
VPS33B-201ENST00000333371 SIRT7Q9NRC8 400 aa10.39□□□□□ -0.75
VPS33B-201ENST00000333371 KLF13Q9Y2Y9 288 aaPredicted RBP10.39□□□□□ -0.75
VPS33B-201ENST00000333371 TRAV1-1A0A0B4J248 108 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.38□□□□□ -0.75
VPS33B-201ENST00000333371 KRASP01116 189 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 GRPP07492 148 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 FABP4P15090 132 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 MEOX1P50221 254 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 NKX6-1P78426 367 aaPredicted RBP10.38□□□□□ -0.75
VPS33B-201ENST00000333371 ZNF816Q0VGE8 651 aaPredicted RBP10.38□□□□□ -0.75
VPS33B-201ENST00000333371 LRRC75BQ2VPJ9 315 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 DPPA3Q6W0C5 159 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 HIST3H2BBQ8N257 126 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 FGFRL1Q8N441 504 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 RPP25LQ8N5L8 163 aaKnown RBP10.38□□□□□ -0.75
VPS33B-201ENST00000333371 C5orf30Q96GV9 206 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 SNX22Q96L94 193 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 SLC25A22Q9H936 323 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 SDF2L1Q9HCN8 221 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 MPC1Q9Y5U8 109 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 OR5B21A6NL26 309 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 J3QT63 122 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 CLDN1O95832 211 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 SP1P08047 785 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 G6PCP35575 357 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 ATP1A1-AS1Q5TC04 95 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 ZNF497Q6ZNH5 498 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 OR1L1Q8NH94 360 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 GTF3AQ92664 365 aaKnown RBP10.38□□□□□ -0.75
VPS33B-201ENST00000333371 RHOVQ96L33 236 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 PFDN5Q99471 154 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 WDR61Q9GZS3 305 aaKnown RBP10.38□□□□□ -0.75
VPS33B-201ENST00000333371 CLN8Q9UBY8 286 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 CADP27708 2225 aa10.38□□□□□ -0.75
VPS33B-201ENST00000333371 KLRC4-KLRK1H3BQV0 150 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 WNT9BO14905 357 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 PPP1R2P9O14990 202 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 GALR2O43603 387 aaPredicted RBP10.37□□□□□ -0.75
VPS33B-201ENST00000333371 RPL30P62888 115 aaKnown RBP10.37□□□□□ -0.75
VPS33B-201ENST00000333371 SLC38A11Q08AI6 406 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 RTP5Q14D33 572 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 ADIRFQ15847 76 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 ACSM6Q6P461 480 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 BTNL3Q6UXE8 466 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 ZNF826PQ6ZT77 177 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 MBD3L1Q8WWY6 194 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 LSM10Q969L4 123 aaKnown RBP10.37□□□□□ -0.75
VPS33B-201ENST00000333371 RPUSD4Q96CM3 377 aaKnown RBP10.37□□□□□ -0.75
VPS33B-201ENST00000333371 CXorf65A6NEN9 183 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 PSPNO60542 156 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 NXPH2O95156 264 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 CYB5R3P00387 301 aaPredicted RBP10.37□□□□□ -0.75
VPS33B-201ENST00000333371 SLC25A6P12236 298 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 CD46P15529 392 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 BMP5P22003 454 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 IDH3GP51553 393 aaPredicted RBP10.37□□□□□ -0.75
VPS33B-201ENST00000333371 CD81P60033 236 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 LINC00596Q86U02 117 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 C1orf87Q8N0U7 546 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 TAF15Q92804 592 aaKnown RBP eCLIP10.37□□□□□ -0.75
VPS33B-201ENST00000333371 LHX4Q969G2 390 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 CLDN34H7C241 214 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 ZNF737O75373 536 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 TPRX1Q8N7U7 411 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 OR52L2PQ8NGH6 319 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 ZDHHC16Q969W1 377 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 HIPK2Q9H2X6 1198 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 DMRT1Q9Y5R6 373 aa10.37□□□□□ -0.75
VPS33B-201ENST00000333371 EP300Q09472 2414 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms