RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 JAGN1Q8N5M9 183 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 COMMD1Q8N668 190 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 OR4F17Q8NGA8 305 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 OR13C5Q8NGS8 318 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 KCNG3Q8TAE7 436 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 UFD1Q92890 307 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 MUL1Q969V5 352 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 OR4F4Q96R69 305 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 SLC25A33Q9BSK2 321 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 TM2D1Q9BX74 207 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 MGAT4AQ9UM21 535 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 PSG11Q9UQ72 335 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 TRBV6-6A0A0A6YYG2 114 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 MAGEA13PA6NCF6 341 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 ITGB1BP1O14713 200 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 SLC22A1O15245 554 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 RGS10O43665 173 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 ARL6IP5O75915 188 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 MAS1P04201 325 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 CRHBPP24387 322 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 NFYBP25208 207 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 CD1BP29016 333 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 RAB13P51153 203 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 AQP4P55087 323 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 RPP30P78346 268 aaKnown RBP5.04□□□□□ -1.6
SMG1-201ENST00000330588 ACSM3Q53FZ2 586 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 PDLIM3Q53GG5 364 aaPredicted RBP5.04□□□□□ -1.6
SMG1-201ENST00000330588 FAM209BQ5JX69 171 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 ATAD3CQ5T2N8 411 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 FAM71F2Q6NXP2 309 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 BAIAP2L2Q6UXY1 529 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 IDO2Q6ZQW0 420 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 MOB1BQ7L9L4 216 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 LRRTM1Q86UE6 522 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 TMEM219Q86XT9 240 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 SLC38A6Q8IZM9 456 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 ZFP41Q8N8Y5 198 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 ZNF439Q8NDP4 499 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 OR6M1Q8NGM8 313 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 OR10X1Q8NGY0 326 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 MRGPRDQ8TDS7 321 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 ARL11Q969Q4 196 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 ST6GALNAC6Q969X2 333 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 GPHA2Q96T91 129 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 RIMS4Q9H426 269 aaPredicted RBP5.04□□□□□ -1.6
SMG1-201ENST00000330588 ACOT13Q9NPJ3 140 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 SLC35D1Q9NTN3 355 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 RHBDL2Q9NX52 303 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 NKX1-2Q9UD57 310 aaPredicted RBP5.04□□□□□ -1.6
SMG1-201ENST00000330588 JPT1Q9UK76 154 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 HSF4Q9ULV5 492 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 RAB26Q9ULW5 256 aa5.04□□□□□ -1.6
SMG1-201ENST00000330588 IGHV1-3A0A0C4DH29 117 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 LOC100506127A0A0U1RQW1 187 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 MEX3AA1L020 520 aaKnown RBP5.03□□□□□ -1.6
SMG1-201ENST00000330588 TMEM14DPA8MWL7 114 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 SDCBPO00560 298 aaPredicted RBP5.03□□□□□ -1.6
SMG1-201ENST00000330588 SLC17A2O00624 439 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 HSPB6O14558 160 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 HSD17B6O14756 317 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 LANCL1O43813 399 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 RGS11O94810 467 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 DIRAS3O95661 229 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 AMY1AP04745 511 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 VSIG10L2P0DP72 767 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 SRMP19623 302 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 CHATP28329 748 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 SSTR5P35346 364 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 NUP62P37198 522 aaPredicted RBP5.03□□□□□ -1.6
SMG1-201ENST00000330588 GABARAPL2P60520 117 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 RPS27AP62979 156 aaKnown RBP5.03□□□□□ -1.6
SMG1-201ENST00000330588 QRFPP83859 136 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 HSD17B12Q53GQ0 312 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 TPRA1Q86W33 373 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 TGIF2LXQ8IUE1 241 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 FAM89BQ8N5H3 189 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 Q8N6K4 173 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 C5orf56Q8N8D9 126 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 OR4X2Q8NGF9 303 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 NEK7Q8TDX7 302 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 CHPT1Q8WUD6 406 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 ORAI1Q96D31 301 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 NEDD4LQ96PU5 975 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 OR5M11Q96RB7 305 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 NKX3-1Q99801 234 aaPredicted RBP5.03□□□□□ -1.6
SMG1-201ENST00000330588 GON7Q9BXV9 100 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 YTHDF1Q9BYJ9 559 aaKnown RBP5.03□□□□□ -1.6
SMG1-201ENST00000330588 SELENOIQ9C0D9 397 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 LIN7CQ9NUP9 197 aaKnown RBP5.03□□□□□ -1.6
SMG1-201ENST00000330588 KCNIP1Q9NZI2 227 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 TRAPPC2LQ9UL33 140 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 SIGLEC9Q9Y336 463 aa5.03□□□□□ -1.6
SMG1-201ENST00000330588 ANK2Q01484 3957 aa5.02□□□□□ -1.61
SMG1-201ENST00000330588 C12orf77C9JDV5 145 aa5.02□□□□□ -1.61
SMG1-201ENST00000330588 PTGES3LE9PB15 166 aa5.02□□□□□ -1.61
SMG1-201ENST00000330588 UBE2CO00762 179 aa5.02□□□□□ -1.61
SMG1-201ENST00000330588 YPEL1O60688 119 aa5.02□□□□□ -1.61
SMG1-201ENST00000330588 DUS4LO95620 317 aaKnown RBP5.02□□□□□ -1.61
SMG1-201ENST00000330588 NAPSAO96009 420 aa5.02□□□□□ -1.61
SMG1-201ENST00000330588 IGHG2P01859 326 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms