RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 C1orf100Q5SVJ3 147 aa11.31□□□□□ -0.6
CTHRC1-201ENST00000330295 RAB12Q6IQ22 244 aa11.31□□□□□ -0.6
CTHRC1-201ENST00000330295 SLC16A12Q6ZSM3 486 aa11.31□□□□□ -0.6
CTHRC1-201ENST00000330295 LINC00336Q6ZUF6 198 aa11.31□□□□□ -0.6
CTHRC1-201ENST00000330295 LRRTM1Q86UE6 522 aa11.31□□□□□ -0.6
CTHRC1-201ENST00000330295 MRGPRDQ8TDS7 321 aa11.31□□□□□ -0.6
CTHRC1-201ENST00000330295 FAM46BQ96A09 425 aa11.31□□□□□ -0.6
CTHRC1-201ENST00000330295 TMEM59Q9BXS4 323 aa11.31□□□□□ -0.6
CTHRC1-201ENST00000330295 ABCG5Q9H222 651 aa11.31□□□□□ -0.6
CTHRC1-201ENST00000330295 ETAA1Q9NY74 926 aa11.31□□□□□ -0.6
CTHRC1-201ENST00000330295 IDI2-AS1Q9NZ38 188 aa11.31□□□□□ -0.6
CTHRC1-201ENST00000330295 TRAPPC2LQ9UL33 140 aa11.31□□□□□ -0.6
CTHRC1-201ENST00000330295 KLK5Q9Y337 293 aaPredicted RBP11.31□□□□□ -0.6
CTHRC1-201ENST00000330295 A0A1W2PP11 408 aa11.3□□□□□ -0.6
CTHRC1-201ENST00000330295 AIPO00170 330 aa11.3□□□□□ -0.6
CTHRC1-201ENST00000330295 SPINT2O43291 252 aa11.3□□□□□ -0.6
CTHRC1-201ENST00000330295 IGLV1-51P01701 117 aa11.3□□□□□ -0.6
CTHRC1-201ENST00000330295 VDAC1P21796 283 aa11.3□□□□□ -0.6
CTHRC1-201ENST00000330295 PITPNAQ00169 270 aa11.3□□□□□ -0.6
CTHRC1-201ENST00000330295 RAB11BQ15907 218 aa11.3□□□□□ -0.6
CTHRC1-201ENST00000330295 C6orf183Q5T699 404 aa11.3□□□□□ -0.6
CTHRC1-201ENST00000330295 TRAT1Q6PIZ9 186 aa11.3□□□□□ -0.6
CTHRC1-201ENST00000330295 LINC00322Q6ZN03 302 aaPredicted RBP11.3□□□□□ -0.6
CTHRC1-201ENST00000330295 OR13A1Q8NGR1 328 aa11.3□□□□□ -0.6
CTHRC1-201ENST00000330295 OR9G1Q8NH87 305 aa11.3□□□□□ -0.6
CTHRC1-201ENST00000330295 PLPPR1Q8TBJ4 325 aa11.3□□□□□ -0.6
CTHRC1-201ENST00000330295 Q96M66 194 aa11.3□□□□□ -0.6
CTHRC1-201ENST00000330295 URM1Q9BTM9 101 aaKnown RBP11.3□□□□□ -0.6
CTHRC1-201ENST00000330295 ZNF286AQ9HBT8 521 aa11.3□□□□□ -0.6
CTHRC1-201ENST00000330295 KCNIP1Q9NZI2 227 aa11.3□□□□□ -0.6
CTHRC1-201ENST00000330295 SLC22A1O15245 554 aa11.29□□□□□ -0.6
CTHRC1-201ENST00000330295 ORC5O43913 435 aa11.29□□□□□ -0.6
CTHRC1-201ENST00000330295 PDCD6O75340 191 aa11.29□□□□□ -0.6
CTHRC1-201ENST00000330295 GALP22466 123 aa11.29□□□□□ -0.6
CTHRC1-201ENST00000330295 PSMB9P28065 219 aa11.29□□□□□ -0.6
CTHRC1-201ENST00000330295 FABP5Q01469 135 aa11.29□□□□□ -0.6
CTHRC1-201ENST00000330295 C17orf58Q2M2W7 97 aa11.29□□□□□ -0.6
CTHRC1-201ENST00000330295 TMEM30BQ3MIR4 351 aa11.29□□□□□ -0.6
CTHRC1-201ENST00000330295 ZNF497Q6ZNH5 498 aa11.29□□□□□ -0.6
CTHRC1-201ENST00000330295 TMEM91Q6ZNR0 172 aa11.29□□□□□ -0.6
CTHRC1-201ENST00000330295 TGIF2LXQ8IUE1 241 aa11.29□□□□□ -0.6
CTHRC1-201ENST00000330295 TMEM104Q8NE00 496 aa11.29□□□□□ -0.6
CTHRC1-201ENST00000330295 RFESDQ8TAC1 157 aa11.29□□□□□ -0.6
CTHRC1-201ENST00000330295 TOMM40LQ969M1 308 aa11.29□□□□□ -0.6
CTHRC1-201ENST00000330295 ARL11Q969Q4 196 aa11.29□□□□□ -0.6
CTHRC1-201ENST00000330295 RPEQ96AT9 228 aa11.29□□□□□ -0.6
CTHRC1-201ENST00000330295 KIRREL1Q96J84 757 aa11.29□□□□□ -0.6
CTHRC1-201ENST00000330295 KLK15Q9H2R5 256 aa11.29□□□□□ -0.6
CTHRC1-201ENST00000330295 LINC00574Q9H8X3 128 aa11.29□□□□□ -0.6
CTHRC1-201ENST00000330295 LIN7CQ9NUP9 197 aaKnown RBP11.29□□□□□ -0.6
CTHRC1-201ENST00000330295 NDUFB11Q9NX14 153 aa11.29□□□□□ -0.6
CTHRC1-201ENST00000330295 RCC2Q9P258 522 aaKnown RBP11.29□□□□□ -0.6
CTHRC1-201ENST00000330295 STUB1Q9UNE7 303 aa11.29□□□□□ -0.6
CTHRC1-201ENST00000330295 A0A087X0M5 115 aa11.28□□□□□ -0.6
CTHRC1-201ENST00000330295 A0A1B0GX30 115 aa11.28□□□□□ -0.6
CTHRC1-201ENST00000330295 LINC01619G3V211 115 aa11.28□□□□□ -0.6
CTHRC1-201ENST00000330295 SLC17A2O00624 439 aa11.28□□□□□ -0.6
CTHRC1-201ENST00000330295 IGKV1D-33P01593 117 aa11.28□□□□□ -0.6
CTHRC1-201ENST00000330295 IGKV1-33P01594 117 aa11.28□□□□□ -0.6
CTHRC1-201ENST00000330295 MT-ND4P03905 459 aa11.28□□□□□ -0.6
CTHRC1-201ENST00000330295 CGB3P0DN86 165 aa11.28□□□□□ -0.6
CTHRC1-201ENST00000330295 CGB7P0DN87 165 aa11.28□□□□□ -0.6
CTHRC1-201ENST00000330295 RPS27AP62979 156 aaKnown RBP11.28□□□□□ -0.6
CTHRC1-201ENST00000330295 LTC4SQ16873 150 aa11.28□□□□□ -0.6
CTHRC1-201ENST00000330295 UBE2UQ5VVX9 321 aa11.28□□□□□ -0.6
CTHRC1-201ENST00000330295 ZNF773Q6PK81 442 aa11.28□□□□□ -0.6
CTHRC1-201ENST00000330295 ANKRD13BQ86YJ7 626 aa11.28□□□□□ -0.6
CTHRC1-201ENST00000330295 SPARTQ8N0X7 666 aa11.28□□□□□ -0.6
CTHRC1-201ENST00000330295 OR52M1Q8NGK5 317 aa11.28□□□□□ -0.6
CTHRC1-201ENST00000330295 CCDC107Q8WV48 283 aa11.28□□□□□ -0.6
CTHRC1-201ENST00000330295 KCTD7Q96MP8 289 aa11.28□□□□□ -0.6
CTHRC1-201ENST00000330295 AK6Q9Y3D8 172 aaKnown RBP11.28□□□□□ -0.6
CTHRC1-201ENST00000330295 V9GY05 133 aa11.28□□□□□ -0.6
CTHRC1-201ENST00000330295 TRAV1-2A0A0B4J238 106 aa11.27□□□□□ -0.61
CTHRC1-201ENST00000330295 TRDV1A0A1B0GX56 115 aa11.27□□□□□ -0.61
CTHRC1-201ENST00000330295 A0A1W2PPI3 338 aa11.27□□□□□ -0.61
CTHRC1-201ENST00000330295 NCBP2LA6PVI3 153 aaKnown RBP11.27□□□□□ -0.61
CTHRC1-201ENST00000330295 NPIPB11E5RHQ5 1161 aa11.27□□□□□ -0.61
CTHRC1-201ENST00000330295 CD37P11049 281 aa11.27□□□□□ -0.61
CTHRC1-201ENST00000330295 IL3RAP26951 378 aa11.27□□□□□ -0.61
CTHRC1-201ENST00000330295 MADCAM1Q13477 382 aa11.27□□□□□ -0.61
CTHRC1-201ENST00000330295 SYT6Q5T7P8 510 aaPredicted RBP11.27□□□□□ -0.61
CTHRC1-201ENST00000330295 GTSCR1Q86UQ5 136 aa11.27□□□□□ -0.61
CTHRC1-201ENST00000330295 OR10X1Q8NGY0 326 aa11.27□□□□□ -0.61
CTHRC1-201ENST00000330295 ALX4Q9H161 411 aaPredicted RBP11.27□□□□□ -0.61
CTHRC1-201ENST00000330295 VCX3AQ9NNX9 186 aa11.27□□□□□ -0.61
CTHRC1-201ENST00000330295 UBE2QL1A1L167 161 aa11.26□□□□□ -0.61
CTHRC1-201ENST00000330295 J3QR06 171 aa11.26□□□□□ -0.61
CTHRC1-201ENST00000330295 SDCBPO00560 298 aaPredicted RBP11.26□□□□□ -0.61
CTHRC1-201ENST00000330295 OR5H8P0DN80 308 aa11.26□□□□□ -0.61
CTHRC1-201ENST00000330295 BLVRBP30043 206 aaPredicted RBP11.26□□□□□ -0.61
CTHRC1-201ENST00000330295 SSTR5P35346 364 aa11.26□□□□□ -0.61
CTHRC1-201ENST00000330295 P2RY14Q15391 338 aa11.26□□□□□ -0.61
CTHRC1-201ENST00000330295 SSX1Q16384 188 aa11.26□□□□□ -0.61
CTHRC1-201ENST00000330295 KCTD21Q4G0X4 260 aa11.26□□□□□ -0.61
CTHRC1-201ENST00000330295 ZNF554Q86TJ5 538 aa11.26□□□□□ -0.61
CTHRC1-201ENST00000330295 RSRP1Q9BUV0 290 aa11.26□□□□□ -0.61
CTHRC1-201ENST00000330295 RIMS4Q9H426 269 aaPredicted RBP11.26□□□□□ -0.61
CTHRC1-201ENST00000330295 CHMP1AQ9HD42 196 aaPredicted RBP11.26□□□□□ -0.61
CTHRC1-201ENST00000330295 PLEKHJ1Q9NW61 149 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms