RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 EGLN1Q9GZT9 426 aa12.19□□□□□ -0.46
TPM3-206ENST00000330188 FAM90A26D6RGX4 464 aa12.19□□□□□ -0.46
TPM3-206ENST00000330188 P0C879 139 aa12.19□□□□□ -0.46
TPM3-206ENST00000330188 FOLR2P14207 255 aa12.19□□□□□ -0.46
TPM3-206ENST00000330188 SSTR5P35346 364 aa12.19□□□□□ -0.46
TPM3-206ENST00000330188 TLE4Q04727 773 aa12.19□□□□□ -0.46
TPM3-206ENST00000330188 OR2B11Q5JQS5 317 aa12.19□□□□□ -0.46
TPM3-206ENST00000330188 CD177Q8N6Q3 437 aa12.19□□□□□ -0.46
TPM3-206ENST00000330188 CD300LFQ8TDQ1 290 aa12.19□□□□□ -0.46
TPM3-206ENST00000330188 NINJ1Q92982 152 aa12.19□□□□□ -0.46
TPM3-206ENST00000330188 LURAP1Q96LR2 239 aa12.19□□□□□ -0.46
TPM3-206ENST00000330188 RSG1Q9BU20 258 aa12.19□□□□□ -0.46
TPM3-206ENST00000330188 HEATR1Q9H583 2144 aaKnown RBP12.19□□□□□ -0.46
TPM3-206ENST00000330188 BRWD1-AS2P59051 145 aa12.18□□□□□ -0.46
TPM3-206ENST00000330188 UBE2KP61086 200 aa12.18□□□□□ -0.46
TPM3-206ENST00000330188 ZNF816Q0VGE8 651 aaPredicted RBP12.18□□□□□ -0.46
TPM3-206ENST00000330188 RHEBQ15382 184 aa12.18□□□□□ -0.46
TPM3-206ENST00000330188 MSMO1Q15800 293 aa12.18□□□□□ -0.46
TPM3-206ENST00000330188 HAGHQ16775 308 aa12.18□□□□□ -0.46
TPM3-206ENST00000330188 SOHLH1Q5JUK2 328 aa12.18□□□□□ -0.46
TPM3-206ENST00000330188 SFT2D1Q8WV19 159 aa12.18□□□□□ -0.46
TPM3-206ENST00000330188 HIST1H2BAQ96A08 127 aa12.18□□□□□ -0.46
TPM3-206ENST00000330188 KLF2Q9Y5W3 355 aaPredicted RBP12.18□□□□□ -0.46
TPM3-206ENST00000330188 TTC28Q96AY4 2481 aa12.18□□□□□ -0.46
TPM3-206ENST00000330188 HBE1P02100 147 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 DAOP14920 347 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 EGR1P18146 543 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 G6PCP35575 357 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 HBG1P69891 147 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 HBG2P69892 147 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 MZT1Q08AG7 82 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 CATR1Q13166 79 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 ICAM4Q14773 271 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 SPANXN5Q5MJ07 72 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 IGFL3Q6UXB1 125 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 LRP11Q86VZ4 500 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 OR2Z1Q8NG97 314 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 SCGB1C1Q8TD33 95 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 RBKSQ9H477 322 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 TUBA4BQ9H853 241 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 EP300Q09472 2414 aaPredicted RBP12.17□□□□□ -0.46
TPM3-206ENST00000330188 PRRC2CQ9Y520 2896 aaKnown RBP12.17□□□□□ -0.46
TPM3-206ENST00000330188 IGHV3-43A0A0B4J1X8 118 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 C17orf98A8MV24 154 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 C15orf65H3BRN8 121 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 PPIHO43447 177 aaKnown RBP12.17□□□□□ -0.46
TPM3-206ENST00000330188 SCAF4O95104 1147 aaKnown RBP12.17□□□□□ -0.46
TPM3-206ENST00000330188 S1PR2O95136 353 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 SRP19P09132 144 aaKnown RBP12.17□□□□□ -0.46
TPM3-206ENST00000330188 IGHV3-43DP0DP04 118 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 EIF2S3P41091 472 aaKnown RBP12.17□□□□□ -0.46
TPM3-206ENST00000330188 ZNF83P51522 516 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 PAX5Q02548 391 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 TNFRSF9Q07011 255 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 LRRC75BQ2VPJ9 315 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 ZNF506Q5JVG8 444 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 BTNL3Q6UXE8 466 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 TCTEX1D2Q8WW35 142 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 RBMXL1Q96E39 390 aaKnown RBP12.17□□□□□ -0.46
TPM3-206ENST00000330188 HSPB7Q9UBY9 170 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 FAM215AQ9Y5M1 114 aa12.17□□□□□ -0.46
TPM3-206ENST00000330188 CFAP47Q6ZTR5 3102 aa12.16□□□□□ -0.46
TPM3-206ENST00000330188 ODAMA1E959 279 aa12.16□□□□□ -0.46
TPM3-206ENST00000330188 SRRM5B3KS81 715 aa12.16□□□□□ -0.46
TPM3-206ENST00000330188 KRASP01116 189 aa12.16□□□□□ -0.46
TPM3-206ENST00000330188 OR8U8P0C7N1 319 aa12.16□□□□□ -0.46
TPM3-206ENST00000330188 PRDX2P32119 198 aa12.16□□□□□ -0.46
TPM3-206ENST00000330188 ZNF474Q6S9Z5 364 aaPredicted RBP12.16□□□□□ -0.46
TPM3-206ENST00000330188 LILRB2Q8N423 598 aa12.16□□□□□ -0.46
TPM3-206ENST00000330188 RPRMLQ8N4K4 120 aa12.16□□□□□ -0.46
TPM3-206ENST00000330188 CLDND2Q8NHS1 167 aa12.16□□□□□ -0.46
TPM3-206ENST00000330188 RFESDQ8TAC1 157 aa12.16□□□□□ -0.46
TPM3-206ENST00000330188 PSMG3Q9BT73 122 aaPredicted RBP12.16□□□□□ -0.46
TPM3-206ENST00000330188 DCTN5Q9BTE1 182 aa12.16□□□□□ -0.46
TPM3-206ENST00000330188 VSIRQ9H7M9 311 aa12.16□□□□□ -0.46
TPM3-206ENST00000330188 DIDO1Q9BTC0 2240 aaKnown RBP12.16□□□□□ -0.46
TPM3-206ENST00000330188 TRAV1-1A0A0B4J248 108 aa12.16□□□□□ -0.46
TPM3-206ENST00000330188 ZNF737O75373 536 aa12.16□□□□□ -0.46
TPM3-206ENST00000330188 HSPB1P04792 205 aaKnown RBP12.16□□□□□ -0.46
TPM3-206ENST00000330188 RAB2AP61019 212 aa12.16□□□□□ -0.46
TPM3-206ENST00000330188 TMEM14EPQ6UXP3 125 aa12.16□□□□□ -0.46
TPM3-206ENST00000330188 Q6ZS92 163 aa12.16□□□□□ -0.46
TPM3-206ENST00000330188 ZFP82Q8N141 532 aa12.16□□□□□ -0.46
TPM3-206ENST00000330188 ISOC2Q96AB3 205 aa12.16□□□□□ -0.46
TPM3-206ENST00000330188 S100PBPQ96BU1 408 aa12.16□□□□□ -0.46
TPM3-206ENST00000330188 PARD6GQ9BYG4 376 aaPredicted RBP12.16□□□□□ -0.46
TPM3-206ENST00000330188 RPRMQ9NS64 109 aa12.16□□□□□ -0.46
TPM3-206ENST00000330188 DUSP13Q9UII6 198 aa12.16□□□□□ -0.46
TPM3-206ENST00000330188 PUS1Q9Y606 427 aaKnown RBP eCLIP12.16□□□□□ -0.46
TPM3-206ENST00000330188 IGKV1D-17A0A075B6S4 117 aa12.15□□□□□ -0.46
TPM3-206ENST00000330188 M0R1B8 84 aa12.15□□□□□ -0.46
TPM3-206ENST00000330188 CLDN1O95832 211 aa12.15□□□□□ -0.46
TPM3-206ENST00000330188 EDDM3AQ14507 147 aa12.15□□□□□ -0.46
TPM3-206ENST00000330188 TIMM23BQ5SRD1 257 aa12.15□□□□□ -0.46
TPM3-206ENST00000330188 TRAT1Q6PIZ9 186 aa12.15□□□□□ -0.46
TPM3-206ENST00000330188 ZNF66Q6ZN08 573 aa12.15□□□□□ -0.46
TPM3-206ENST00000330188 C2CD4CQ8TF44 421 aa12.15□□□□□ -0.46
TPM3-206ENST00000330188 OR4C12Q96R67 309 aa12.15□□□□□ -0.46
TPM3-206ENST00000330188 WDR61Q9GZS3 305 aaKnown RBP12.15□□□□□ -0.46
TPM3-206ENST00000330188 BIN3Q9NQY0 253 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms