RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 PLPP1O14494 284 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 ITGB1BP1O14713 200 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 NDUFA2O43678 99 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 OR7C2O60412 319 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 SMIM24O75264 130 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 POP7O75817 140 aaKnown RBP0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 TTC4O95801 387 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 NRASP01111 189 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 HRASP01112 189 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 KRASP01116 189 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 IFNGP01579 166 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 STAG3L3P0CL85 134 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 M6PRP20645 277 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 IL12BP29460 328 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 EVI2BP34910 448 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 RPL14P50914 215 aaKnown RBP0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 SLC18A1P54219 525 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 RPL23P62829 140 aaKnown RBP0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 SARNPP82979 210 aaKnown RBP0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 CDK5Q00535 292 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 MEF2CQ06413 473 aaPredicted RBP0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 LAMTOR4Q0VGL1 99 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 ST3GAL4Q11206 333 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 ELOCQ15369 112 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 RPEL1Q2QD12 228 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 SDHAF4Q5VUM1 108 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 HCP5Q6MZN7 132 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 DHRS4L2Q6PKH6 230 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 OPN5Q6U736 354 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 Q6ZS92 163 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 CBLN2Q8IUK8 224 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 RIBC1Q8N443 379 aaPredicted RBP0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 PRELID2Q8N945 189 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 DDI1Q8WTU0 396 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 ORAOV1Q8WV07 137 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 PIH1D2Q8WWB5 315 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 ASB13Q8WXK3 278 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 ITFG2Q969R8 447 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 TMIGD2Q96BF3 282 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 GPR82Q96P67 336 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 IP6K3Q96PC2 410 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 PDCD1LG2Q9BQ51 273 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 SEC22CQ9BRL7 303 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 GNB1LQ9BYB4 327 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 METTL17Q9H7H0 456 aaPredicted RBP0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 C19orf12Q9NSK7 152 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 DNAJC27Q9NZQ0 273 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 PISDQ9UG56 409 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 RABL2BQ9UNT1 228 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 RPL26L1Q9UNX3 145 aaKnown RBP0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 TRIP11Q15643 1979 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 ANKRD36A6QL64 1941 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 ABCA4P78363 2273 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 A0A1W2PRG6 482 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 OR5H1A6NKK0 313 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 H3BQ15 152 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 UPK2O00526 184 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 UBDO15205 165 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 PSCAO43653 123 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 CLDN11O75508 207 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 PIAS1O75925 651 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 YEATS4O95619 227 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 RHOCP08134 193 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 CCDC172P0C7W6 258 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 CECR9P0C854 216 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 SCGB1C2P0DMR2 95 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 HLA-GP17693 338 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 BCKDHBP21953 392 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 ELK4P28324 431 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 CASQ1P31415 396 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 GPR1P46091 355 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 OR1G1P47890 313 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 CDK9P50750 372 aaKnown RBP0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 GZMMP51124 257 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 TCTAP57738 103 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 ARF6P62330 175 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 RPL10AP62906 217 aaKnown RBP0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 TFAMQ00059 246 aaKnown RBP0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 CYP24A1Q07973 514 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 BNIP2Q12982 314 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 EXOC3L4Q17RC7 722 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 RNASE13Q5GAN3 156 aaKnown RBP0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 UBE2NLQ5JXB2 153 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 RBM48Q5RL73 367 aaKnown RBP0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 ALKAL1Q6UXT8 129 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 Q6ZT83 130 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 NDUFAF7Q7L592 441 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 CYP4Z1Q86W10 505 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 GID4Q8IVV7 300 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 IQCF2Q8IXL9 164 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 SLC7A5P1Q8MH63 180 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 STK40Q8N2I9 435 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 SDR9C7Q8NEX9 313 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 SLC26A10Q8NG04 563 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 OR5T1Q8NG75 326 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 OR2M7Q8NG81 312 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 SCGB1C1Q8TD33 95 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 MYOZ3Q8TDC0 251 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 FAM131CQ96AQ9 280 aa0.62□□□□□ -2.31
CCDC144A-201ENST00000328495 ZNF707Q96C28 371 aaPredicted RBP0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms