RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 S100A4P26447 101 aaKnown RBP9.8□□□□□ -0.84
COL4A5-201ENST00000328300 RBFOX3A6NFN3 312 aa9.8□□□□□ -0.84
COL4A5-201ENST00000328300 DNASE2O00115 360 aaPredicted RBP9.8□□□□□ -0.84
COL4A5-201ENST00000328300 HSBP1O75506 76 aa9.8□□□□□ -0.84
COL4A5-201ENST00000328300 KLF7O75840 302 aaPredicted RBP9.8□□□□□ -0.84
COL4A5-201ENST00000328300 HIST1H1EP10412 219 aaKnown RBP9.8□□□□□ -0.84
COL4A5-201ENST00000328300 ZNF788Q6ZQV5 615 aa9.8□□□□□ -0.84
COL4A5-201ENST00000328300 FAM24BQ8N5W8 94 aa9.8□□□□□ -0.84
COL4A5-201ENST00000328300 POC1AQ8NBT0 407 aa9.8□□□□□ -0.84
COL4A5-201ENST00000328300 MRPL13Q9BYD1 178 aaKnown RBP9.8□□□□□ -0.84
COL4A5-201ENST00000328300 MS4A7Q9GZW8 240 aaPredicted RBP9.8□□□□□ -0.84
COL4A5-201ENST00000328300 VAX2Q9UIW0 290 aa9.8□□□□□ -0.84
COL4A5-201ENST00000328300 GATCO43716 136 aaKnown RBP9.8□□□□□ -0.84
COL4A5-201ENST00000328300 ORM1P02763 201 aa9.8□□□□□ -0.84
COL4A5-201ENST00000328300 RNASE6Q93091 150 aaKnown RBP9.8□□□□□ -0.84
COL4A5-201ENST00000328300 PRO1933Q9H354 126 aa9.8□□□□□ -0.84
COL4A5-201ENST00000328300 IQCF6A8MYZ5 107 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 COTL1Q14019 142 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 TMEM37Q8WXS4 190 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 RALYQ9UKM9 306 aaKnown RBP9.79□□□□□ -0.84
COL4A5-201ENST00000328300 NYNRINQ9P2P1 1898 aaKnown RBP9.79□□□□□ -0.84
COL4A5-201ENST00000328300 CD40P25942 277 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 PRSS12P56730 875 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 IGSF11Q5DX21 431 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 SLC16A13Q7RTY0 426 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 LYZL2Q7Z4W2 148 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 NPVFQ9HCQ7 196 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 DLL1O00548 723 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 G6PCP35575 357 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 RAB9AP51151 201 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 PAFAH1B2P68402 229 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 RPEL1Q2QD12 228 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 C19orf48Q6RUI8 117 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 MUC15Q8N387 334 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 ABHD17AQ96GS6 310 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 MS4A3Q96HJ5 214 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 HIST1H3AP68431 136 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 BVESQ8NE79 360 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 LINC00052Q96N35 136 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 E9PLN8 166 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 CCL1P22362 96 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 CRYBA2P53672 197 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 C9orf62Q8N4C0 152 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 ADAD2Q8NCV1 583 aaKnown RBP9.79□□□□□ -0.84
COL4A5-201ENST00000328300 MEGF10Q96KG7 1140 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 ZNF488Q96MN9 340 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 VKORC1Q9BQB6 163 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 C19orf24Q9BVV8 132 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 ASCL3Q9NQ33 180 aa9.79□□□□□ -0.84
COL4A5-201ENST00000328300 OPN1MWP04001 364 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 MELTFP08582 738 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 OPN1MW2P0DN77 364 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 OPN1MW3P0DN78 364 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 PMCHP20382 165 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 HTR1DP28221 377 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 GTF3AQ92664 365 aaKnown RBP9.78□□□□□ -0.84
COL4A5-201ENST00000328300 ZNF552Q9H707 407 aaPredicted RBP9.78□□□□□ -0.84
COL4A5-201ENST00000328300 ZMAT5Q9UDW3 170 aaKnown RBP9.78□□□□□ -0.84
COL4A5-201ENST00000328300 MFNGO00587 321 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 LYPD3O95274 346 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 CLEC7AQ9BXN2 247 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 PPIAL4CA0A0B4J2A2 164 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 A0A1W2PS18 150 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 PPIAL4GP0DN37 164 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 RND3P61587 244 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 UBE2V2Q15819 145 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 REPIN1Q9BWE0 567 aaKnown RBP9.78□□□□□ -0.84
COL4A5-201ENST00000328300 TREM2Q9NZC2 230 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 IGSF23A1L1A6 192 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 GALR1P47211 349 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 RPL8P62917 257 aaKnown RBP9.78□□□□□ -0.84
COL4A5-201ENST00000328300 SIRT7Q9NRC8 400 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 SCN5AQ14524 2016 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 TMEM183BQ1AE95 376 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 H1FOOQ8IZA3 346 aaPredicted RBP9.78□□□□□ -0.84
COL4A5-201ENST00000328300 WDR31Q8NA23 367 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 OR1B1Q8NGR6 318 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 TMUB1Q9BVT8 246 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 PLSCR2Q9NRY7 297 aa9.78□□□□□ -0.84
COL4A5-201ENST00000328300 LOC105371242A0A075B767 164 aa9.77□□□□□ -0.84
COL4A5-201ENST00000328300 PGLYRP1O75594 196 aaPredicted RBP9.77□□□□□ -0.84
COL4A5-201ENST00000328300 DEDDO75618 318 aa9.77□□□□□ -0.84
COL4A5-201ENST00000328300 B2MP61769 119 aa9.77□□□□□ -0.84
COL4A5-201ENST00000328300 SLC35E3Q7Z769 313 aa9.77□□□□□ -0.84
COL4A5-201ENST00000328300 AP4M1O00189 453 aa9.77□□□□□ -0.84
COL4A5-201ENST00000328300 HPXP02790 462 aa9.77□□□□□ -0.84
COL4A5-201ENST00000328300 PRR27Q6MZM9 219 aa9.77□□□□□ -0.84
COL4A5-201ENST00000328300 FAM210BQ96KR6 192 aa9.77□□□□□ -0.84
COL4A5-201ENST00000328300 SCNM1Q9BWG6 230 aa9.77□□□□□ -0.84
COL4A5-201ENST00000328300 TMEM8BA6NDV4 472 aa9.77□□□□□ -0.85
COL4A5-201ENST00000328300 TIMP3P35625 211 aa9.77□□□□□ -0.85
COL4A5-201ENST00000328300 ZNF154Q13106 437 aa9.77□□□□□ -0.85
COL4A5-201ENST00000328300 LAIR2Q6ISS4 152 aa9.77□□□□□ -0.85
COL4A5-201ENST00000328300 DNM1P46Q6ZS02 220 aa9.77□□□□□ -0.85
COL4A5-201ENST00000328300 STPG3Q8N7X2 389 aa9.77□□□□□ -0.85
COL4A5-201ENST00000328300 OR11H7Q8NGC8 314 aa9.77□□□□□ -0.85
COL4A5-201ENST00000328300 NRIP2Q9BQI9 281 aa9.77□□□□□ -0.85
COL4A5-201ENST00000328300 HIGD1AQ9Y241 93 aa9.77□□□□□ -0.85
COL4A5-201ENST00000328300 IGHV2OR16-5A0A0B4J2B6 119 aa9.77□□□□□ -0.85
COL4A5-201ENST00000328300 CECR9P0C854 216 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms