RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 GMPPAQ96IJ6 420 aaPredicted RBP14.67□□□□□ -0.06
COL9A1-201ENST00000320755 HBE1P02100 147 aa14.67□□□□□ -0.06
COL9A1-201ENST00000320755 ZNF506Q5JVG8 444 aa14.67□□□□□ -0.06
COL9A1-201ENST00000320755 BEND4Q6ZU67 534 aa14.67□□□□□ -0.06
COL9A1-201ENST00000320755 MOB1BQ7L9L4 216 aa14.67□□□□□ -0.06
COL9A1-201ENST00000320755 Q8IYB0 196 aa14.67□□□□□ -0.06
COL9A1-201ENST00000320755 ZNF525Q8N782 197 aa14.67□□□□□ -0.06
COL9A1-201ENST00000320755 CEACAM1P13688 526 aa14.66□□□□□ -0.06
COL9A1-201ENST00000320755 LSM10Q969L4 123 aaKnown RBP14.66□□□□□ -0.06
COL9A1-201ENST00000320755 RBMXL1Q96E39 390 aaKnown RBP14.66□□□□□ -0.06
COL9A1-201ENST00000320755 SMDT1Q9H4I9 107 aa14.66□□□□□ -0.06
COL9A1-201ENST00000320755 SPENQ96T58 3664 aaKnown RBP14.66□□□□□ -0.06
COL9A1-201ENST00000320755 C12orf77C9JDV5 145 aa14.66□□□□□ -0.06
COL9A1-201ENST00000320755 RPL30P62888 115 aaKnown RBP14.66□□□□□ -0.06
COL9A1-201ENST00000320755 ZNF674Q2M3X9 581 aa14.66□□□□□ -0.06
COL9A1-201ENST00000320755 PLA2G2CQ5R387 149 aa14.66□□□□□ -0.06
COL9A1-201ENST00000320755 VWA1Q6PCB0 445 aa14.66□□□□□ -0.06
COL9A1-201ENST00000320755 GALMQ96C23 342 aa14.66□□□□□ -0.06
COL9A1-201ENST00000320755 MUCL1Q96DR8 90 aa14.66□□□□□ -0.06
COL9A1-201ENST00000320755 TVP23CQ96ET8 276 aa14.66□□□□□ -0.06
COL9A1-201ENST00000320755 IFT22Q9H7X7 185 aa14.66□□□□□ -0.06
COL9A1-201ENST00000320755 MLNRO43193 412 aa14.65□□□□□ -0.06
COL9A1-201ENST00000320755 HSPB1P04792 205 aaKnown RBP14.65□□□□□ -0.06
COL9A1-201ENST00000320755 RAC2P15153 192 aa14.65□□□□□ -0.06
COL9A1-201ENST00000320755 TNFSF10P50591 281 aa14.65□□□□□ -0.06
COL9A1-201ENST00000320755 HBG1P69891 147 aa14.65□□□□□ -0.06
COL9A1-201ENST00000320755 HBG2P69892 147 aa14.65□□□□□ -0.06
COL9A1-201ENST00000320755 ZNF146Q15072 292 aa14.65□□□□□ -0.06
COL9A1-201ENST00000320755 NIT2Q9NQR4 276 aa14.65□□□□□ -0.06
COL9A1-201ENST00000320755 CLN8Q9UBY8 286 aa14.65□□□□□ -0.06
COL9A1-201ENST00000320755 UBE2CO00762 179 aa14.65□□□□□ -0.06
COL9A1-201ENST00000320755 IFNA17P01571 189 aa14.65□□□□□ -0.06
COL9A1-201ENST00000320755 HOXC12P31275 282 aa14.65□□□□□ -0.06
COL9A1-201ENST00000320755 KIAA0141Q14154 515 aaPredicted RBP14.65□□□□□ -0.06
COL9A1-201ENST00000320755 ZNF726P1Q15940 193 aa14.65□□□□□ -0.06
COL9A1-201ENST00000320755 ZDHHC11Q9H8X9 412 aa14.65□□□□□ -0.06
COL9A1-201ENST00000320755 METRNQ9UJH8 293 aa14.65□□□□□ -0.06
COL9A1-201ENST00000320755 TGIF2-C20orf24A0A0A6YYL0 155 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 CXCL1P09341 107 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 OR8U8P0C7N1 319 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 SLC25A6P12236 298 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 GABRA6Q16445 453 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 FDCSPQ8NFU4 85 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 Q8WTZ3 238 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 RCC1LQ96I51 464 aaKnown RBP14.64□□□□□ -0.07
COL9A1-201ENST00000320755 DCTN5Q9BTE1 182 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 RIF1Q5UIP0 2472 aaKnown RBP14.64□□□□□ -0.07
COL9A1-201ENST00000320755 ROS1P08922 2347 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 CEBPZOSA8MTT3 80 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 TIMM8AO60220 97 aaPredicted RBP14.64□□□□□ -0.07
COL9A1-201ENST00000320755 YIF1AO95070 293 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 HBZP02008 142 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 ERVFRD-1P60508 538 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 HEPN1Q6WQI6 88 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 Q6ZR03 302 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 FAM214BQ7L5A3 538 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 OR8G5Q8NG78 346 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 TCTEX1D2Q8WW35 142 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 NINJ1Q92982 152 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 RBKSQ9H477 322 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 MBNL3Q9NUK0 354 aaKnown RBP14.64□□□□□ -0.07
COL9A1-201ENST00000320755 TMEM30CPA0ZSE6 113 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 NPIPB11E5RHQ5 1161 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 IGHV3-13P01766 116 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 IGHV3-7P01780 117 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 SSTR5P35346 364 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 CD200P41217 278 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 GLIPR1P48060 266 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 SLC38A11Q08AI6 406 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 FIP1L1Q6UN15 594 aaKnown RBP14.64□□□□□ -0.07
COL9A1-201ENST00000320755 TREM2Q9NZC2 230 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 SPTBN2O15020 2390 aa14.64□□□□□ -0.07
COL9A1-201ENST00000320755 LOC102723971A0A1B0GUV8 181 aa14.63□□□□□ -0.07
COL9A1-201ENST00000320755 OR5H1A6NKK0 313 aa14.63□□□□□ -0.07
COL9A1-201ENST00000320755 EDDM3AQ14507 147 aa14.63□□□□□ -0.07
COL9A1-201ENST00000320755 KHDC3LQ587J8 217 aa14.63□□□□□ -0.07
COL9A1-201ENST00000320755 C17orf98A8MV24 154 aa14.63□□□□□ -0.07
COL9A1-201ENST00000320755 S1PR2O95136 353 aa14.63□□□□□ -0.07
COL9A1-201ENST00000320755 NDUFA6P56556 154 aa14.63□□□□□ -0.07
COL9A1-201ENST00000320755 TRIP6Q15654 476 aaKnown RBP14.63□□□□□ -0.07
COL9A1-201ENST00000320755 WIPI2Q9Y4P8 454 aa14.63□□□□□ -0.07
COL9A1-201ENST00000320755 IQCF6A8MYZ5 107 aa14.62□□□□□ -0.07
COL9A1-201ENST00000320755 AP4M1O00189 453 aa14.62□□□□□ -0.07
COL9A1-201ENST00000320755 CYB5BO43169 146 aa14.62□□□□□ -0.07
COL9A1-201ENST00000320755 FOXF2Q12947 444 aa14.62□□□□□ -0.07
COL9A1-201ENST00000320755 C5orf30Q96GV9 206 aa14.62□□□□□ -0.07
COL9A1-201ENST00000320755 DMXL1Q9Y485 3027 aa14.62□□□□□ -0.07
COL9A1-201ENST00000320755 MGAQ8IWI9 3026 aa14.62□□□□□ -0.07
COL9A1-201ENST00000320755 TNFRSF9Q07011 255 aa14.62□□□□□ -0.07
COL9A1-201ENST00000320755 ELOBQ15370 118 aa14.62□□□□□ -0.07
COL9A1-201ENST00000320755 LRRC75BQ2VPJ9 315 aa14.62□□□□□ -0.07
COL9A1-201ENST00000320755 SP5Q6BEB4 398 aaPredicted RBP14.62□□□□□ -0.07
COL9A1-201ENST00000320755 ZDHHC16Q969W1 377 aa14.62□□□□□ -0.07
COL9A1-201ENST00000320755 METTL1Q9UBP6 276 aaKnown RBP14.62□□□□□ -0.07
COL9A1-201ENST00000320755 PTBP3O95758 552 aaKnown RBP14.62□□□□□ -0.07
COL9A1-201ENST00000320755 BCL2P10415 239 aa14.62□□□□□ -0.07
COL9A1-201ENST00000320755 Q6ZT83 130 aa14.62□□□□□ -0.07
COL9A1-201ENST00000320755 TMPRSS5Q9H3S3 457 aa14.62□□□□□ -0.07
COL9A1-201ENST00000320755 MAP1LC3B2A6NCE7 125 aa14.61□□□□□ -0.07
COL9A1-201ENST00000320755 C11orf53Q8IXP5 236 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms