RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 RASL11BQ9BPW5 248 aa11.1□□□□□ -0.63
RPP40-201ENST00000319533 HSPB9Q9BQS6 159 aa11.1□□□□□ -0.63
RPP40-201ENST00000319533 CHCHD6Q9BRQ6 235 aa11.1□□□□□ -0.63
RPP40-201ENST00000319533 TMEM59Q9BXS4 323 aa11.1□□□□□ -0.63
RPP40-201ENST00000319533 RNF167Q9H6Y7 350 aa11.1□□□□□ -0.63
RPP40-201ENST00000319533 H3BMQ9 156 aa11.09□□□□□ -0.63
RPP40-201ENST00000319533 SPINT2O43291 252 aa11.09□□□□□ -0.63
RPP40-201ENST00000319533 ECI1P42126 302 aa11.09□□□□□ -0.63
RPP40-201ENST00000319533 INSL3P51460 131 aa11.09□□□□□ -0.63
RPP40-201ENST00000319533 PSMD7P51665 324 aa11.09□□□□□ -0.63
RPP40-201ENST00000319533 F2RL1P55085 397 aa11.09□□□□□ -0.63
RPP40-201ENST00000319533 RPS27AP62979 156 aaKnown RBP11.09□□□□□ -0.63
RPP40-201ENST00000319533 RUNX1Q01196 453 aa11.09□□□□□ -0.63
RPP40-201ENST00000319533 KIAA0141Q14154 515 aaPredicted RBP11.09□□□□□ -0.63
RPP40-201ENST00000319533 RAB11BQ15907 218 aa11.09□□□□□ -0.63
RPP40-201ENST00000319533 CTF1Q16619 201 aa11.09□□□□□ -0.63
RPP40-201ENST00000319533 TMEM30BQ3MIR4 351 aa11.09□□□□□ -0.63
RPP40-201ENST00000319533 ZNF256Q9Y2P7 627 aaPredicted RBP11.09□□□□□ -0.63
RPP40-201ENST00000319533 AK6Q9Y3D8 172 aaKnown RBP11.09□□□□□ -0.63
RPP40-201ENST00000319533 UBE2QL1A1L167 161 aa11.08□□□□□ -0.64
RPP40-201ENST00000319533 CCDC160A6NGH7 325 aa11.08□□□□□ -0.64
RPP40-201ENST00000319533 SLC17A2O00624 439 aa11.08□□□□□ -0.64
RPP40-201ENST00000319533 SLC31A2O15432 143 aa11.08□□□□□ -0.64
RPP40-201ENST00000319533 OR5H8P0DN80 308 aa11.08□□□□□ -0.64
RPP40-201ENST00000319533 CD37P11049 281 aa11.08□□□□□ -0.64
RPP40-201ENST00000319533 ARSBP15848 533 aa11.08□□□□□ -0.64
RPP40-201ENST00000319533 VDAC1P21796 283 aa11.08□□□□□ -0.64
RPP40-201ENST00000319533 PPIFP30405 207 aaKnown RBP11.08□□□□□ -0.64
RPP40-201ENST00000319533 SOX6P35712 828 aa11.08□□□□□ -0.64
RPP40-201ENST00000319533 ZNF134P52741 427 aa11.08□□□□□ -0.64
RPP40-201ENST00000319533 LSM3P62310 102 aaKnown RBP11.08□□□□□ -0.64
RPP40-201ENST00000319533 OR10K2Q6IF99 312 aa11.08□□□□□ -0.64
RPP40-201ENST00000319533 GAPTQ8N292 157 aa11.08□□□□□ -0.64
RPP40-201ENST00000319533 OR4K15Q8NH41 348 aa11.08□□□□□ -0.64
RPP40-201ENST00000319533 KCTD7Q96MP8 289 aa11.08□□□□□ -0.64
RPP40-201ENST00000319533 URM1Q9BTM9 101 aaKnown RBP11.08□□□□□ -0.64
RPP40-201ENST00000319533 CENPOQ9BU64 300 aa11.08□□□□□ -0.64
RPP40-201ENST00000319533 KCNIP1Q9NZI2 227 aa11.08□□□□□ -0.64
RPP40-201ENST00000319533 DNAH1Q9P2D7 4330 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 IGHV3-43A0A0B4J1X8 118 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 TMEM14DPA8MWL7 114 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 C12orf77C9JDV5 145 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 I3L521 148 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 LCE2BO14633 110 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 PDCD5O14737 125 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 IGHV3-43DP0DP04 118 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 MYL9P24844 172 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 TMBIM6P55061 237 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 NCS1P62166 190 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 UNC119Q13432 240 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 SPCS2Q15005 226 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 P2RY14Q15391 338 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 ZNF260Q3ZCT1 412 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 CT45A1Q5HYN5 189 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 ASPHD1Q5U4P2 390 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 STEAP3Q658P3 488 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 SIGIRRQ6IA17 410 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 CD200R1LQ6Q8B3 271 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 PRR18Q8N4B5 295 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 OR11H1Q8NG94 326 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 CT45A3Q8NHU0 189 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 UBALD1Q8TB05 177 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 UBE2E2Q96LR5 201 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 ASCL2Q99929 193 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 TM2D1Q9BX74 207 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 NDUFA13Q9P0J0 144 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 GNG12Q9UBI6 72 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 RSL24D1Q9UHA3 163 aaKnown RBP11.07□□□□□ -0.64
RPP40-201ENST00000319533 STUB1Q9UNE7 303 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 V9GY05 133 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 SORL1Q92673 2214 aa11.07□□□□□ -0.64
RPP40-201ENST00000319533 LOC100506127A0A0U1RQW1 187 aa11.06□□□□□ -0.64
RPP40-201ENST00000319533 LANCL1O43813 399 aa11.06□□□□□ -0.64
RPP40-201ENST00000319533 AIREO43918 545 aa11.06□□□□□ -0.64
RPP40-201ENST00000319533 IGLV1-40P01703 118 aa11.06□□□□□ -0.64
RPP40-201ENST00000319533 VBP1P61758 197 aa11.06□□□□□ -0.64
RPP40-201ENST00000319533 CNPY1Q3B7I2 92 aa11.06□□□□□ -0.64
RPP40-201ENST00000319533 ZNF491Q8N8L2 437 aa11.06□□□□□ -0.64
RPP40-201ENST00000319533 RAB2BQ8WUD1 216 aa11.06□□□□□ -0.64
RPP40-201ENST00000319533 GFI1Q99684 422 aa11.06□□□□□ -0.64
RPP40-201ENST00000319533 KCNK15Q9H427 330 aa11.06□□□□□ -0.64
RPP40-201ENST00000319533 ZNF107Q9UII5 783 aaPredicted RBP11.06□□□□□ -0.64
RPP40-201ENST00000319533 SMAD5-AS1Q9Y6J3 95 aa11.06□□□□□ -0.64
RPP40-201ENST00000319533 TRAV1-2A0A0B4J238 106 aa11.05□□□□□ -0.64
RPP40-201ENST00000319533 TRDV1A0A1B0GX56 115 aa11.05□□□□□ -0.64
RPP40-201ENST00000319533 SHISA3A0PJX4 238 aa11.05□□□□□ -0.64
RPP40-201ENST00000319533 HBZP02008 142 aa11.05□□□□□ -0.64
RPP40-201ENST00000319533 OR8U8P0C7N1 319 aa11.05□□□□□ -0.64
RPP40-201ENST00000319533 GALP22466 123 aa11.05□□□□□ -0.64
RPP40-201ENST00000319533 BLVRBP30043 206 aaPredicted RBP11.05□□□□□ -0.64
RPP40-201ENST00000319533 QRFPP83859 136 aa11.05□□□□□ -0.64
RPP40-201ENST00000319533 LSAMPQ13449 338 aa11.05□□□□□ -0.64
RPP40-201ENST00000319533 C22orf42Q6IC83 251 aa11.05□□□□□ -0.64
RPP40-201ENST00000319533 ZNF554Q86TJ5 538 aa11.05□□□□□ -0.64
RPP40-201ENST00000319533 OR1N2Q8NGR9 330 aa11.05□□□□□ -0.64
RPP40-201ENST00000319533 MRPL30Q8TCC3 161 aaKnown RBP11.05□□□□□ -0.64
RPP40-201ENST00000319533 DGCR14Q96DF8 476 aaKnown RBP11.05□□□□□ -0.64
RPP40-201ENST00000319533 RBMXL1Q96E39 390 aaKnown RBP11.05□□□□□ -0.64
RPP40-201ENST00000319533 SULT4A1Q9BR01 284 aa11.05□□□□□ -0.64
RPP40-201ENST00000319533 KLK15Q9H2R5 256 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms