RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 F2RP25116 425 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 PMELP40967 661 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 FUT6P51993 359 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 PAX9P55771 341 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 TFF3Q07654 80 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 A0A0U1RQV5 110 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 SLC17A3O00476 420 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 DTYMKP23919 212 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 GCH1P30793 250 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 RPL23P62829 140 aaKnown RBP12.12□□□□□ -0.47
PABPC1-201ENST00000318607 CCL7P80098 99 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 ODF3L1Q8IXM7 274 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 SGMS2Q8NHU3 365 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 PLPPR1Q8TBJ4 325 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 CLDN23Q96B33 292 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 SIGLEC12Q96PQ1 595 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 NDUFAF3Q9BU61 184 aa12.12□□□□□ -0.47
PABPC1-201ENST00000318607 M0R143 59 aa12.11□□□□□ -0.47
PABPC1-201ENST00000318607 CCL4P13236 92 aa12.11□□□□□ -0.47
PABPC1-201ENST00000318607 PMCHP20382 165 aa12.11□□□□□ -0.47
PABPC1-201ENST00000318607 CEACAM6P40199 344 aa12.11□□□□□ -0.47
PABPC1-201ENST00000318607 SPCS3P61009 180 aa12.11□□□□□ -0.47
PABPC1-201ENST00000318607 HBG1P69891 147 aa12.11□□□□□ -0.47
PABPC1-201ENST00000318607 HBG2P69892 147 aa12.11□□□□□ -0.47
PABPC1-201ENST00000318607 KDF1Q8NAX2 398 aaPredicted RBP12.11□□□□□ -0.47
PABPC1-201ENST00000318607 CPEB3Q8NE35 698 aaKnown RBP12.11□□□□□ -0.47
PABPC1-201ENST00000318607 NABP1Q96AH0 204 aa12.11□□□□□ -0.47
PABPC1-201ENST00000318607 MRPL37Q9BZE1 423 aaKnown RBP12.11□□□□□ -0.47
PABPC1-201ENST00000318607 GCM1Q9NP62 436 aa12.11□□□□□ -0.47
PABPC1-201ENST00000318607 SEMA5BQ9P283 1151 aa12.11□□□□□ -0.47
PABPC1-201ENST00000318607 ANAPC10Q9UM13 185 aa12.11□□□□□ -0.47
PABPC1-201ENST00000318607 FOXI3A8MTJ6 420 aaPredicted RBP12.11□□□□□ -0.47
PABPC1-201ENST00000318607 NAPSAO96009 420 aa12.11□□□□□ -0.47
PABPC1-201ENST00000318607 SSMEM1Q8WWF3 244 aa12.11□□□□□ -0.47
PABPC1-201ENST00000318607 ANGPTL4Q9BY76 406 aa12.11□□□□□ -0.47
PABPC1-201ENST00000318607 MTCH1Q9NZJ7 389 aa12.11□□□□□ -0.47
PABPC1-201ENST00000318607 TTC28Q96AY4 2481 aa12.1□□□□□ -0.47
PABPC1-201ENST00000318607 ACTL6BO94805 426 aa12.1□□□□□ -0.47
PABPC1-201ENST00000318607 PTGDSP41222 190 aa12.1□□□□□ -0.47
PABPC1-201ENST00000318607 ATP5G3P48201 142 aa12.1□□□□□ -0.47
PABPC1-201ENST00000318607 IL24Q13007 206 aa12.1□□□□□ -0.47
PABPC1-201ENST00000318607 RPS19BP1Q86WX3 136 aaKnown RBP12.1□□□□□ -0.47
PABPC1-201ENST00000318607 OR5P3Q8WZ94 311 aa12.1□□□□□ -0.47
PABPC1-201ENST00000318607 NUDT16L1Q9BRJ7 211 aaKnown RBP12.1□□□□□ -0.47
PABPC1-201ENST00000318607 OPN3Q9H1Y3 402 aaPredicted RBP12.1□□□□□ -0.47
PABPC1-201ENST00000318607 FZR1Q9UM11 496 aa12.1□□□□□ -0.47
PABPC1-201ENST00000318607 BCAT2O15382 392 aaPredicted RBP12.1□□□□□ -0.47
PABPC1-201ENST00000318607 MRPL33O75394 65 aaKnown RBP12.1□□□□□ -0.47
PABPC1-201ENST00000318607 CLDN15P56746 228 aa12.1□□□□□ -0.47
PABPC1-201ENST00000318607 INTS1Q8N201 2190 aaKnown RBP12.1□□□□□ -0.47
PABPC1-201ENST00000318607 YPEL4Q96NS1 127 aa12.1□□□□□ -0.47
PABPC1-201ENST00000318607 SERTAD4Q9NUC0 356 aa12.1□□□□□ -0.47
PABPC1-201ENST00000318607 NAT8Q9UHE5 227 aa12.1□□□□□ -0.47
PABPC1-201ENST00000318607 A0A1W2PPV4 95 aa12.1□□□□□ -0.47
PABPC1-201ENST00000318607 C11orf94C9JXX5 98 aa12.1□□□□□ -0.47
PABPC1-201ENST00000318607 DEGS1O15121 323 aa12.1□□□□□ -0.47
PABPC1-201ENST00000318607 RAMP3O60896 148 aa12.1□□□□□ -0.47
PABPC1-201ENST00000318607 CCL1P22362 96 aa12.1□□□□□ -0.47
PABPC1-201ENST00000318607 CD81P60033 236 aa12.1□□□□□ -0.47
PABPC1-201ENST00000318607 NUTF2P61970 127 aaKnown RBP12.1□□□□□ -0.47
PABPC1-201ENST00000318607 SRPXP78539 464 aa12.1□□□□□ -0.47
PABPC1-201ENST00000318607 VKORC1L1Q8N0U8 176 aa12.1□□□□□ -0.47
PABPC1-201ENST00000318607 NFAM1Q8NET5 270 aaPredicted RBP12.1□□□□□ -0.47
PABPC1-201ENST00000318607 RAB24Q969Q5 203 aa12.1□□□□□ -0.47
PABPC1-201ENST00000318607 HSPB9Q9BQS6 159 aa12.1□□□□□ -0.47
PABPC1-201ENST00000318607 ATP23Q9Y6H3 246 aa12.1□□□□□ -0.47
PABPC1-201ENST00000318607 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.09□□□□□ -0.47
PABPC1-201ENST00000318607 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.09□□□□□ -0.47
PABPC1-201ENST00000318607 FRMD6-AS1P0C7T7 363 aa12.09□□□□□ -0.47
PABPC1-201ENST00000318607 EDDM3AQ14507 147 aa12.09□□□□□ -0.47
PABPC1-201ENST00000318607 ACSM6Q6P461 480 aa12.09□□□□□ -0.47
PABPC1-201ENST00000318607 H1FOOQ8IZA3 346 aaPredicted RBP12.09□□□□□ -0.47
PABPC1-201ENST00000318607 ZIC4Q8N9L1 334 aa12.09□□□□□ -0.47
PABPC1-201ENST00000318607 OR10D3Q8NH80 312 aa12.09□□□□□ -0.47
PABPC1-201ENST00000318607 SLC25A6P12236 298 aa12.09□□□□□ -0.47
PABPC1-201ENST00000318607 ID3Q02535 119 aa12.09□□□□□ -0.47
PABPC1-201ENST00000318607 IQCJQ1A5X6 159 aa12.09□□□□□ -0.47
PABPC1-201ENST00000318607 SYT13Q7L8C5 426 aa12.09□□□□□ -0.47
PABPC1-201ENST00000318607 RYDENQ9NUL5 291 aaKnown RBP12.09□□□□□ -0.47
PABPC1-201ENST00000318607 GOLT1BQ9Y3E0 138 aa12.09□□□□□ -0.47
PABPC1-201ENST00000318607 H0Y8G0 127 aa12.09□□□□□ -0.47
PABPC1-201ENST00000318607 IFI6P09912 130 aa12.09□□□□□ -0.47
PABPC1-201ENST00000318607 IRF2P14316 349 aa12.09□□□□□ -0.47
PABPC1-201ENST00000318607 GLB1P16278 677 aa12.09□□□□□ -0.47
PABPC1-201ENST00000318607 CCR5P51681 352 aa12.09□□□□□ -0.47
PABPC1-201ENST00000318607 ZNF90Q03938 601 aa12.09□□□□□ -0.47
PABPC1-201ENST00000318607 RAB35Q15286 201 aa12.09□□□□□ -0.47
PABPC1-201ENST00000318607 COL13A1Q5TAT6 717 aaPredicted RBP12.09□□□□□ -0.47
PABPC1-201ENST00000318607 RHBDD2Q6NTF9 364 aa12.09□□□□□ -0.47
PABPC1-201ENST00000318607 OR2V1Q8NHB1 315 aa12.09□□□□□ -0.47
PABPC1-201ENST00000318607 OR2H1Q9GZK4 316 aa12.09□□□□□ -0.47
PABPC1-201ENST00000318607 ZG16O60844 167 aa12.08□□□□□ -0.48
PABPC1-201ENST00000318607 CNN1P51911 297 aaKnown RBP12.08□□□□□ -0.48
PABPC1-201ENST00000318607 SPINK14Q6IE38 97 aa12.08□□□□□ -0.48
PABPC1-201ENST00000318607 DBX2Q6ZNG2 339 aa12.08□□□□□ -0.48
PABPC1-201ENST00000318607 CHCHD2Q9Y6H1 151 aaPredicted RBP12.08□□□□□ -0.48
PABPC1-201ENST00000318607 RPL36A-HNRNPH2H7BZ11 118 aa12.08□□□□□ -0.48
PABPC1-201ENST00000318607 P04436 131 aa12.08□□□□□ -0.48
PABPC1-201ENST00000318607 FAM27BQ5VT28 67 aa12.08□□□□□ -0.48
PABPC1-201ENST00000318607 MRGPRGQ86SM5 289 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 240.4 ms