RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 SMPD2O60906 423 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 PRH1P02810 166 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 OPN1MWP04001 364 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 OPN1MW2P0DN77 364 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 OPN1MW3P0DN78 364 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 PLA2G2AP14555 144 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 BRS3P32247 399 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 CHRNA7P36544 502 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 ERVS71-1P61550 626 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 PNRC1Q12796 327 aaPredicted RBP11.08□□□□□ -0.64
CPNE1-201ENST00000317677 SLC9A3R2Q15599 337 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 TMEM241Q24JQ0 296 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 CHRFAM7AQ494W8 412 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 SPATA46Q5T0L3 261 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 C6orf201Q7Z4U5 140 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 CXorf67Q86X51 503 aaPredicted RBP11.08□□□□□ -0.64
CPNE1-201ENST00000317677 WFIKKN1Q96NZ8 548 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 RTBDNQ9BSG5 229 aaPredicted RBP11.08□□□□□ -0.64
CPNE1-201ENST00000317677 SLC7A11Q9UPY5 501 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 OSGIN2Q9Y236 505 aa11.08□□□□□ -0.64
CPNE1-201ENST00000317677 K7EP13 123 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 IL6RP08887 468 aaPredicted RBP11.07□□□□□ -0.64
CPNE1-201ENST00000317677 OR4A8P0C604 315 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 NPBWR2P48146 333 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 FHITP49789 147 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 UBE2NP61088 152 aaKnown RBP11.07□□□□□ -0.64
CPNE1-201ENST00000317677 HLA-DRB3P79483 266 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 TGFBR3Q03167 851 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 TAF9Q16594 264 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 PIGYQ3MUY2 71 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 ZNF506Q5JVG8 444 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 AADACL3Q5VUY0 350 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 BATF2Q8N1L9 274 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 SLC24A4Q8NFF2 622 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 TMEM18Q96B42 140 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 TECTBQ96PL2 329 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 HS3ST6Q96QI5 342 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 DIRC2Q96SL1 478 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 PYGO2Q9BRQ0 406 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 MSL2Q9HCI7 577 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 ZNF71Q9NQZ8 489 aaPredicted RBP11.07□□□□□ -0.64
CPNE1-201ENST00000317677 IL36GQ9NZH8 169 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 GSKIPQ9P0R6 139 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 TMEM238LA0A1B0GVL6 79 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 E5RGE8 158 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 PPP1CCP36873 323 aaKnown RBP11.07□□□□□ -0.64
CPNE1-201ENST00000317677 RND3P61587 244 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 TBC1D28Q2M2D7 210 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 C1orf185Q5T7R7 199 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 NCR3LG1Q68D85 454 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 ZDHHC23Q8IYP9 409 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 ZNF611Q8N823 705 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 C1orf162Q8NEQ5 155 aaPredicted RBP11.07□□□□□ -0.64
CPNE1-201ENST00000317677 HDHD3Q9BSH5 251 aaPredicted RBP11.07□□□□□ -0.64
CPNE1-201ENST00000317677 CTDSP1Q9GZU7 261 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 NSG2Q9Y328 171 aa11.07□□□□□ -0.64
CPNE1-201ENST00000317677 IGKV1D-8A0A087WSZ0 117 aa11.06□□□□□ -0.64
CPNE1-201ENST00000317677 H0YL77 283 aa11.06□□□□□ -0.64
CPNE1-201ENST00000317677 J3QKU1 62 aa11.06□□□□□ -0.64
CPNE1-201ENST00000317677 GEMIN2O14893 280 aaKnown RBP11.06□□□□□ -0.64
CPNE1-201ENST00000317677 SIAH2O43255 324 aa11.06□□□□□ -0.64
CPNE1-201ENST00000317677 WDR1O75083 606 aa11.06□□□□□ -0.64
CPNE1-201ENST00000317677 IGKV3-15P01624 115 aa11.06□□□□□ -0.64
CPNE1-201ENST00000317677 GPM6AP51674 278 aa11.06□□□□□ -0.64
CPNE1-201ENST00000317677 FAM189A2Q15884 450 aa11.06□□□□□ -0.64
CPNE1-201ENST00000317677 CEACAM21Q3KPI0 293 aa11.06□□□□□ -0.64
CPNE1-201ENST00000317677 ALKBH6Q3KRA9 238 aa11.06□□□□□ -0.64
CPNE1-201ENST00000317677 SPSB3Q6PJ21 355 aa11.06□□□□□ -0.64
CPNE1-201ENST00000317677 LHFPL1Q86WI0 220 aa11.06□□□□□ -0.64
CPNE1-201ENST00000317677 FBXL14Q8N1E6 418 aa11.06□□□□□ -0.64
CPNE1-201ENST00000317677 CSNK2A3Q8NEV1 391 aa11.06□□□□□ -0.64
CPNE1-201ENST00000317677 ERGIC1Q969X5 290 aa11.06□□□□□ -0.64
CPNE1-201ENST00000317677 PROCRQ9UNN8 238 aa11.06□□□□□ -0.64
CPNE1-201ENST00000317677 C3orf80F5H4A9 247 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 GPR137BO60478 399 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 CYB5R3P00387 301 aaPredicted RBP11.05□□□□□ -0.64
CPNE1-201ENST00000317677 PDCD1Q15116 288 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 C4orf17Q53FE4 359 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 ZNF474Q6S9Z5 364 aaPredicted RBP11.05□□□□□ -0.64
CPNE1-201ENST00000317677 TGIF2LYQ8IUE0 185 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 SGPP2Q8IWX5 399 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 OSR2Q8N2R0 312 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 Q8NFD4 153 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 OR5P3Q8WZ94 311 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 C20orf144Q9BQM9 153 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 OR2J1Q9GZK6 312 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 WFDC1Q9HC57 220 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 C1orf123Q9NWV4 160 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 A0A1B0GU03 582 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 A6NNC1 897 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 ZNF732B4DXR9 585 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 SCAF4O95104 1147 aaKnown RBP11.05□□□□□ -0.64
CPNE1-201ENST00000317677 BCL3P20749 454 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 OR10J1P30954 320 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 PPP1CBP62140 327 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 ARFRP1Q13795 201 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 IAH1Q2TAA2 248 aaPredicted RBP11.05□□□□□ -0.64
CPNE1-201ENST00000317677 FBXW12Q6X9E4 464 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 FAM57AQ8TBR7 257 aa11.05□□□□□ -0.64
CPNE1-201ENST00000317677 DYRK2Q92630 601 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms