RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 RAB1CQ92928 201 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 CHCHD1Q96BP2 118 aaKnown RBP3.95□□□□□ -1.78
CNOT1-201ENST00000317147 MRPL27Q9P0M9 148 aaKnown RBP3.95□□□□□ -1.78
CNOT1-201ENST00000317147 SMPXQ9UHP9 88 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 RPH3ALQ9UNE2 315 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 MASP2O00187 686 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 CCL16O15467 120 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 IGHV2-5P01817 119 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 GYPAP02724 150 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 CEACAM6P40199 344 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 NHLH1Q02575 133 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 ATG4DQ86TL0 474 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-201ENST00000317147 PIMREGQ9BSJ6 248 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 SLC25A33Q9BSK2 321 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 CHRNA10Q9GZZ6 450 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 CLCF1Q9UBD9 225 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 A0A0G2JK05 382 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 DYNLT3P51808 116 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 PPP1CAP62136 330 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 HIST1H1AQ02539 215 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-201ENST00000317147 OR1C1Q15619 314 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 SPANXN5Q5MJ07 72 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 OR5D18Q8NGL1 313 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 OR4S2Q8NH73 311 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 FAM131CQ96AQ9 280 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 WDYHV1Q96HA8 205 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 RARRES2Q99969 163 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 AAMDCQ9H7C9 122 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 WSB2Q9NYS7 404 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-201ENST00000317147 TRAV9-2A0A087WT02 112 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 FTH1P19P0C7X4 201 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 CTSOP43234 321 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-201ENST00000317147 ZNF121P58317 390 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-201ENST00000317147 RPS4XP62701 263 aaKnown RBP3.95□□□□□ -1.78
CNOT1-201ENST00000317147 TBC1D28Q2M2D7 210 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 OR51E1Q8TCB6 317 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 APOBEC4Q8WW27 367 aaKnown RBP3.95□□□□□ -1.78
CNOT1-201ENST00000317147 IL1F10Q8WWZ1 152 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 PRNDQ9UKY0 176 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 OR2W5A6NFC9 320 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 SP1P08047 785 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 CYBAP13498 195 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 CDKN1BP46527 198 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 COA6Q5JTJ3 125 aaKnown RBP3.95□□□□□ -1.78
CNOT1-201ENST00000317147 LYSMD4Q5XG99 296 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 FBXL14Q8N1E6 418 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 OR1F12Q8NHA8 337 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 CLDND2Q8NHS1 167 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 VN1R17PQ8TDU5 208 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 C5orf30Q96GV9 206 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 C5orf66Q9H5L9 145 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 OR6C3Q9NZP0 311 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 CACNG5Q9UF02 275 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 COA3Q9Y2R0 106 aaPredicted RBP3.95□□□□□ -1.78
CNOT1-201ENST00000317147 MEX3AA1L020 520 aaKnown RBP3.95□□□□□ -1.78
CNOT1-201ENST00000317147 RAMP1O60894 148 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 ELNP15502 786 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 HTR1DP28221 377 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 TMPRSS3P57727 454 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 RNASEKQ6P5S7 137 aaKnown RBP3.95□□□□□ -1.78
CNOT1-201ENST00000317147 TMEM136Q6ZRR5 245 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 TMEM25Q86YD3 366 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 PARP12Q9H0J9 701 aaKnown RBP3.95□□□□□ -1.78
CNOT1-201ENST00000317147 SERGEFQ9UGK8 458 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 UNC79Q9P2D8 2635 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 NOTCH1P46531 2555 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 FBN2P35556 2912 aa3.95□□□□□ -1.78
CNOT1-201ENST00000317147 KLF7O75840 302 aaPredicted RBP3.94□□□□□ -1.78
CNOT1-201ENST00000317147 TTRP02766 147 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 CAPZBP47756 277 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 FOXK1P85037 733 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 Q5PR19 223 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 KIRREL2Q6UWL6 708 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 ETFBKMTQ8IXQ9 262 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 OR1L6Q8NGR2 347 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 OR1L3Q8NH93 324 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 GABRG3Q99928 467 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 HSPB9Q9BQS6 159 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 ELOVL1Q9BW60 279 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 LPAR5Q9H1C0 372 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 APOBEC3BQ9UH17 382 aaKnown RBP3.94□□□□□ -1.78
CNOT1-201ENST00000317147 COL5A1P20908 1838 aaPredicted RBP3.94□□□□□ -1.78
CNOT1-201ENST00000317147 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.94□□□□□ -1.78
CNOT1-201ENST00000317147 MYADML2A6NDP7 307 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 C9JCJ5 164 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 CHST1O43916 411 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 MRPL33O75394 65 aaKnown RBP3.94□□□□□ -1.78
CNOT1-201ENST00000317147 AMER3Q8N944 861 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 OR1L1Q8NH94 360 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 TM2D1Q9BX74 207 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 OOEPA6NGQ2 149 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 NXPH2O95156 264 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 LEPROTL1O95214 131 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 GNG3P63215 75 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 ZXDCQ2QGD7 858 aaPredicted RBP3.94□□□□□ -1.78
CNOT1-201ENST00000317147 ACTL10Q5JWF8 245 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 PRAMEF5Q5TYX0 476 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 PRAMEF6Q5VXH4 476 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 TEPPQ6URK8 271 aa3.94□□□□□ -1.78
CNOT1-201ENST00000317147 VSTM2LQ96N03 204 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms