RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 CLDN18P56856 261 aa10.07□□□□□ -0.8
LDLRAD3-201ENST00000315571 SLC38A9Q8NBW4 561 aa10.07□□□□□ -0.8
LDLRAD3-201ENST00000315571 OTOSQ8NHW6 89 aa10.07□□□□□ -0.8
LDLRAD3-201ENST00000315571 WDYHV1Q96HA8 205 aa10.07□□□□□ -0.8
LDLRAD3-201ENST00000315571 NAA38Q9BRA0 125 aaKnown RBP10.07□□□□□ -0.8
LDLRAD3-201ENST00000315571 SLC25A22Q9H936 323 aa10.07□□□□□ -0.8
LDLRAD3-201ENST00000315571 NRN1Q9NPD7 142 aa10.07□□□□□ -0.8
LDLRAD3-201ENST00000315571 CEP250Q9BV73 2442 aa10.07□□□□□ -0.8
LDLRAD3-201ENST00000315571 A0A0B4J2E0 115 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 A0A1B0GX12 115 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 NGFRP08138 427 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 ARF6P62330 175 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 FOXK1P85037 733 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 MEF2BQ02080 365 aaPredicted RBP10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 DAZLQ92904 295 aaKnown RBP10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 ZNF703Q9H7S9 590 aaPredicted RBP10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 CLCF1Q9UBD9 225 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 DKK1O94907 266 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 CRYBA4P53673 196 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 SELENOVP59797 346 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 PLPPR5Q32ZL2 321 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 VAX1Q5SQQ9 334 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 LCN12Q6JVE5 192 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 CCDC71LQ8N9Z2 235 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 ZNF764Q96H86 408 aaPredicted RBP10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 SFRP2Q96HF1 295 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 MRPL18Q9H0U6 180 aaKnown RBP10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 KIF26BQ2KJY2 2108 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 J3QR89 54 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 TNFSF15O95150 251 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 TOMM40O96008 361 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 SRP14P37108 136 aaKnown RBP10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 EMDP50402 254 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 ZNF83P51522 516 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 RBPJQ06330 500 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 MLC1Q15049 377 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 LINC01590Q5TEZ4 76 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 RAET1LQ5VY80 246 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 VASH2Q86V25 355 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 CDC20BQ86Y33 519 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 ATP6V0BQ99437 205 aa10.06□□□□□ -0.8
LDLRAD3-201ENST00000315571 IGHV1-69-2A0A0G2JMI3 117 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 ARPC3O15145 178 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 GPR75O95800 540 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 CYC1P08574 325 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 OR10J4P0C629 311 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 AZU1P20160 251 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 THBS3P49746 956 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 UBE2NP61088 152 aaKnown RBP10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 ZNF117Q03924 483 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 C1orf140Q5VVS0 124 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 PLCXD3Q63HM9 321 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 CYP2G1PQ6ZSU1 146 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 SHISA5Q8N114 240 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 CDRT4Q8N9R6 151 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 FER1L6-AS1Q8NA97 138 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 TMEM52Q8NDY8 209 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 CDC42EP3Q9UKI2 254 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 HEATR1Q9H583 2144 aaKnown RBP10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 IGSF23A1L1A6 192 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 NKX2-6A6NCS4 301 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 KBTBD11O94819 623 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 TAS2R30P59541 319 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 OR1B1Q8NGR6 318 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 WDR61Q9GZS3 305 aaKnown RBP10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 SERTAD4Q9NUC0 356 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 THYN1Q9P016 225 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 CES1P1Q9UKY3 287 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 SLC5A6Q9Y289 635 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 KIAA2026Q5HYC2 2103 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 ANGPTL7O43827 346 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 CRYAAP02489 173 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 AADACP22760 399 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 FOXL2P58012 376 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 CNN3Q15417 329 aaKnown RBP10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 TMEM204Q9BSN7 226 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 NAA60Q9H7X0 242 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 PEF1Q9UBV8 284 aaKnown RBP10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 FBXL7Q9UJT9 491 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 VDAC3Q9Y277 283 aa10.05□□□□□ -0.8
LDLRAD3-201ENST00000315571 ESDP10768 282 aa10.04□□□□□ -0.8
LDLRAD3-201ENST00000315571 SLC35B1P78383 322 aa10.04□□□□□ -0.8
LDLRAD3-201ENST00000315571 UNC119Q13432 240 aa10.04□□□□□ -0.8
LDLRAD3-201ENST00000315571 ZNF788Q6ZQV5 615 aa10.04□□□□□ -0.8
LDLRAD3-201ENST00000315571 SHISA6Q6ZSJ9 500 aa10.04□□□□□ -0.8
LDLRAD3-201ENST00000315571 TMEM144Q7Z5S9 345 aa10.04□□□□□ -0.8
LDLRAD3-201ENST00000315571 NANOS1Q8WY41 292 aaKnown RBP10.04□□□□□ -0.8
LDLRAD3-201ENST00000315571 RAB37Q96AX2 223 aa10.04□□□□□ -0.8
LDLRAD3-201ENST00000315571 BOD1Q96IK1 185 aa10.04□□□□□ -0.8
LDLRAD3-201ENST00000315571 VSTM5A8MXK1 200 aa10.04□□□□□ -0.8
LDLRAD3-201ENST00000315571 ZNF16P17020 682 aaPredicted RBP10.04□□□□□ -0.8
LDLRAD3-201ENST00000315571 C6orf15Q6UXA7 325 aaPredicted RBP10.04□□□□□ -0.8
LDLRAD3-201ENST00000315571 ASB10Q8WXI3 467 aa10.04□□□□□ -0.8
LDLRAD3-201ENST00000315571 ARHGAP21Q5T5U3 1957 aa10.04□□□□□ -0.8
LDLRAD3-201ENST00000315571 CHST1O43916 411 aa10.04□□□□□ -0.8
LDLRAD3-201ENST00000315571 IAPPP10997 89 aa10.04□□□□□ -0.8
LDLRAD3-201ENST00000315571 PDLIM4P50479 330 aa10.04□□□□□ -0.8
LDLRAD3-201ENST00000315571 PSG9Q00887 426 aa10.04□□□□□ -0.8
LDLRAD3-201ENST00000315571 RPL18Q07020 188 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms