RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 C16orf82Q7Z2V1 217 aa11.86□□□□□ -0.51
SPAST-201ENST00000315285 C1orf174Q8IYL3 243 aa11.86□□□□□ -0.51
SPAST-201ENST00000315285 SAXO1Q8IYX7 474 aa11.86□□□□□ -0.51
SPAST-201ENST00000315285 OR4X1Q8NH49 305 aa11.86□□□□□ -0.51
SPAST-201ENST00000315285 RAB1BQ9H0U4 201 aa11.86□□□□□ -0.51
SPAST-201ENST00000315285 SDK2Q58EX2 2172 aa11.86□□□□□ -0.51
SPAST-201ENST00000315285 NPBWR2P48146 333 aa11.86□□□□□ -0.51
SPAST-201ENST00000315285 OR1L6Q8NGR2 347 aa11.86□□□□□ -0.51
SPAST-201ENST00000315285 RAB29O14966 203 aa11.86□□□□□ -0.51
SPAST-201ENST00000315285 KLK2P20151 261 aa11.86□□□□□ -0.51
SPAST-201ENST00000315285 PTTG1IPP53801 180 aa11.86□□□□□ -0.51
SPAST-201ENST00000315285 TMEM187Q14656 261 aa11.86□□□□□ -0.51
SPAST-201ENST00000315285 MRPL54Q6P161 138 aaKnown RBP11.86□□□□□ -0.51
SPAST-201ENST00000315285 SOSTQ9BQB4 213 aa11.86□□□□□ -0.51
SPAST-201ENST00000315285 ASXL3Q9C0F0 2248 aa11.86□□□□□ -0.51
SPAST-201ENST00000315285 CYB5R3P00387 301 aaPredicted RBP11.86□□□□□ -0.51
SPAST-201ENST00000315285 COX5BP10606 129 aa11.86□□□□□ -0.51
SPAST-201ENST00000315285 ID4P47928 161 aa11.86□□□□□ -0.51
SPAST-201ENST00000315285 MEF2BQ02080 365 aaPredicted RBP11.86□□□□□ -0.51
SPAST-201ENST00000315285 RND1Q92730 232 aa11.86□□□□□ -0.51
SPAST-201ENST00000315285 ZNF708P17019 499 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 RPL31P62899 125 aaKnown RBP11.85□□□□□ -0.51
SPAST-201ENST00000315285 P2RY6Q15077 328 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 C1QL2Q7Z5L3 287 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 FGFRL1Q8N441 504 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 ZNF645Q8N7E2 425 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 ZNF383Q8NA42 475 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 NPVFQ9HCQ7 196 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 A0A1W2PRD5 423 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 A0A1W2PRF3 423 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 A0A1W2PRM7 423 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 C16orf97H3BN30 126 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 EFEMP2O95967 443 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 MELTFP08582 738 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 BTCP35070 178 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 C2orf68Q2NKX9 166 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 CDCP2Q5VXM1 449 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 C10orf113Q5VZT2 155 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 C11orf42Q8N5U0 333 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 OR1L1Q8NH94 360 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 MS4A5Q9H3V2 200 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 OR51B2Q9Y5P1 312 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 UCP3P55916 312 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 TAF15Q92804 592 aaKnown RBP eCLIP11.85□□□□□ -0.51
SPAST-201ENST00000315285 MARS2Q96GW9 593 aaKnown RBP11.85□□□□□ -0.51
SPAST-201ENST00000315285 ABCA7Q8IZY2 2146 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 LYPD3O95274 346 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 MDKP21741 143 aaPredicted RBP11.85□□□□□ -0.51
SPAST-201ENST00000315285 IER3P46695 156 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 ZNF658BQ4V348 819 aaPredicted RBP11.85□□□□□ -0.51
SPAST-201ENST00000315285 VPS25Q9BRG1 176 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 SH3BGRL3Q9H299 93 aa11.85□□□□□ -0.51
SPAST-201ENST00000315285 CHCHD2Q9Y6H1 151 aaPredicted RBP11.85□□□□□ -0.51
SPAST-201ENST00000315285 SNURFLB1AK76 121 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 OR2J3O76001 311 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 ASPHD2Q6ICH7 369 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 SGMS2Q8NHU3 365 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 RBKSQ9H477 322 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 INSIG2Q9Y5U4 225 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 DANCRP0C864 163 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 MPV17P39210 176 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 NHLH1Q02575 133 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 FLVCR1-AS1Q8TAF5 88 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 PXMP4Q9Y6I8 212 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 H0YL77 283 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 NEURL1O76050 574 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 IGLV3-19P01714 112 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 FAM3BP58499 235 aaPredicted RBP11.84□□□□□ -0.51
SPAST-201ENST00000315285 ZNF818PQ6ZRF7 136 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 ASCL5Q7RTU5 278 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 LRP11Q86VZ4 500 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 OR4C12Q96R67 309 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 TMEM204Q9BSN7 226 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 M0R2Z0 102 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 MPDU1O75352 247 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 P01737 135 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 SMIM17P0DL12 118 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 CEBPDP49716 269 aaPredicted RBP11.84□□□□□ -0.51
SPAST-201ENST00000315285 C19orf35Q6ZS72 473 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 STXBP6Q8NFX7 210 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 OR5AU1Q8NGC0 362 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 RHOVQ96L33 236 aa11.84□□□□□ -0.51
SPAST-201ENST00000315285 SLC25A10Q9UBX3 287 aaPredicted RBP11.84□□□□□ -0.51
SPAST-201ENST00000315285 OR5AL1P0C617 328 aa11.83□□□□□ -0.51
SPAST-201ENST00000315285 REG1BP48304 166 aa11.83□□□□□ -0.51
SPAST-201ENST00000315285 CCL8P80075 99 aa11.83□□□□□ -0.51
SPAST-201ENST00000315285 DHRS11Q6UWP2 260 aa11.83□□□□□ -0.51
SPAST-201ENST00000315285 OR8B3Q8NGG8 313 aa11.83□□□□□ -0.51
SPAST-201ENST00000315285 PERPQ96FX8 193 aa11.83□□□□□ -0.51
SPAST-201ENST00000315285 OR2V2Q96R30 315 aa11.83□□□□□ -0.51
SPAST-201ENST00000315285 OR8B2Q96RD0 313 aa11.83□□□□□ -0.51
SPAST-201ENST00000315285 OPN3Q9H1Y3 402 aaPredicted RBP11.83□□□□□ -0.51
SPAST-201ENST00000315285 J3QRE1 110 aa11.83□□□□□ -0.52
SPAST-201ENST00000315285 M0QZ24 198 aa11.83□□□□□ -0.52
SPAST-201ENST00000315285 GNG7O60262 68 aa11.83□□□□□ -0.52
SPAST-201ENST00000315285 OR4A8P0C604 315 aa11.83□□□□□ -0.52
SPAST-201ENST00000315285 DOCK4Q8N1I0 1966 aa11.83□□□□□ -0.52
SPAST-201ENST00000315285 PRR33A8MZF0 331 aa11.83□□□□□ -0.52
SPAST-201ENST00000315285 FAM90A26D6RGX4 464 aa11.83□□□□□ -0.52
SPAST-201ENST00000315285 K7N7A8 449 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms