RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 PIGBOS1A0A0B4J2F0 54 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 PINLYPA6NC86 204 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 IFNA1P01562 189 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 PDLIM4P50479 330 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 IDH3GP51553 393 aaPredicted RBP11.39□□□□□ -0.59
SKA3-202ENST00000314759 RPL23P62829 140 aaKnown RBP11.39□□□□□ -0.59
SKA3-202ENST00000314759 Q0VFX4 171 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 CYP2G1PQ6ZSU1 146 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 MYPOPQ86VE0 399 aaPredicted RBP11.39□□□□□ -0.59
SKA3-202ENST00000314759 LRP11Q86VZ4 500 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 IFI44Q8TCB0 444 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 TAF15Q92804 592 aaKnown RBP eCLIP11.39□□□□□ -0.59
SKA3-202ENST00000314759 APOBEC3DQ96AK3 386 aaPredicted RBP11.39□□□□□ -0.59
SKA3-202ENST00000314759 AGMATQ9BSE5 352 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 DLL3Q9NYJ7 618 aa11.39□□□□□ -0.59
SKA3-202ENST00000314759 TNRC6AQ8NDV7 1962 aaKnown RBP11.38□□□□□ -0.59
SKA3-202ENST00000314759 A0A1B0GUS0 222 aa11.38□□□□□ -0.59
SKA3-202ENST00000314759 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.38□□□□□ -0.59
SKA3-202ENST00000314759 ZNF16P17020 682 aaPredicted RBP11.38□□□□□ -0.59
SKA3-202ENST00000314759 GFRA1P56159 465 aa11.38□□□□□ -0.59
SKA3-202ENST00000314759 MEF2BQ02080 365 aaPredicted RBP11.38□□□□□ -0.59
SKA3-202ENST00000314759 HLA-BQ31612 363 aa11.38□□□□□ -0.59
SKA3-202ENST00000314759 BSXQ3C1V8 233 aa11.38□□□□□ -0.59
SKA3-202ENST00000314759 PRR18Q8N4B5 295 aa11.38□□□□□ -0.59
SKA3-202ENST00000314759 TMEM170AQ8WVE7 144 aa11.38□□□□□ -0.59
SKA3-202ENST00000314759 OR5P3Q8WZ94 311 aa11.38□□□□□ -0.59
SKA3-202ENST00000314759 TMEM45BQ96B21 275 aa11.38□□□□□ -0.59
SKA3-202ENST00000314759 SLC39A9Q9NUM3 307 aa11.38□□□□□ -0.59
SKA3-202ENST00000314759 UBE2L5PA0A1B0GUS4 154 aa11.38□□□□□ -0.59
SKA3-202ENST00000314759 GDF1P27539 372 aa11.38□□□□□ -0.59
SKA3-202ENST00000314759 LINC00596Q86U02 117 aa11.38□□□□□ -0.59
SKA3-202ENST00000314759 GATAD1Q8WUU5 269 aa11.38□□□□□ -0.59
SKA3-202ENST00000314759 A0A1W2PR80 420 aa11.37□□□□□ -0.59
SKA3-202ENST00000314759 A6NNC1 897 aa11.37□□□□□ -0.59
SKA3-202ENST00000314759 B4E171 279 aa11.37□□□□□ -0.59
SKA3-202ENST00000314759 H7BYZ3 331 aa11.37□□□□□ -0.59
SKA3-202ENST00000314759 SS18L1O75177 396 aaPredicted RBP11.37□□□□□ -0.59
SKA3-202ENST00000314759 KBTBD11O94819 623 aa11.37□□□□□ -0.59
SKA3-202ENST00000314759 HOXA6P31267 233 aa11.37□□□□□ -0.59
SKA3-202ENST00000314759 FOLR3P41439 243 aa11.37□□□□□ -0.59
SKA3-202ENST00000314759 TSPAN7P41732 249 aa11.37□□□□□ -0.59
SKA3-202ENST00000314759 TDGF1P3P51864 188 aa11.37□□□□□ -0.59
SKA3-202ENST00000314759 IGFBP7Q16270 282 aa11.37□□□□□ -0.59
SKA3-202ENST00000314759 C21orf62-AS1Q17RA5 79 aa11.37□□□□□ -0.59
SKA3-202ENST00000314759 BTNL3Q6UXE8 466 aa11.37□□□□□ -0.59
SKA3-202ENST00000314759 FAM58AQ8N1B3 248 aa11.37□□□□□ -0.59
SKA3-202ENST00000314759 UBALD1Q8TB05 177 aa11.37□□□□□ -0.59
SKA3-202ENST00000314759 PARD6GQ9BYG4 376 aaPredicted RBP11.37□□□□□ -0.59
SKA3-202ENST00000314759 DIDO1Q9BTC0 2240 aaKnown RBP11.37□□□□□ -0.59
SKA3-202ENST00000314759 M0R143 59 aa11.37□□□□□ -0.59
SKA3-202ENST00000314759 RHBDL1O75783 438 aa11.37□□□□□ -0.59
SKA3-202ENST00000314759 SCGB1D1O95968 90 aa11.37□□□□□ -0.59
SKA3-202ENST00000314759 SFTPCP11686 197 aa11.37□□□□□ -0.59
SKA3-202ENST00000314759 SLC38A11Q08AI6 406 aa11.37□□□□□ -0.59
SKA3-202ENST00000314759 OR8G2PQ6IF36 304 aa11.37□□□□□ -0.59
SKA3-202ENST00000314759 CENPVQ7Z7K6 275 aaPredicted RBP11.37□□□□□ -0.59
SKA3-202ENST00000314759 TMEM18Q96B42 140 aa11.37□□□□□ -0.59
SKA3-202ENST00000314759 TMEM9BQ9NQ34 198 aa11.37□□□□□ -0.59
SKA3-202ENST00000314759 POLR3KQ9Y2Y1 108 aaPredicted RBP11.37□□□□□ -0.59
SKA3-202ENST00000314759 FRYQ5TBA9 3013 aa11.37□□□□□ -0.59
SKA3-202ENST00000314759 TNRC6BQ9UPQ9 1833 aaKnown RBP11.37□□□□□ -0.59
SKA3-202ENST00000314759 NPIPB11E5RHQ5 1161 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 DEGS1O15121 323 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 WNT5AP41221 380 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 CXCL12P48061 93 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 ERVFC1-1P60608 527 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 SRYQ05066 204 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 ACTL10Q5JWF8 245 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.36□□□□□ -0.59
SKA3-202ENST00000314759 ACY3Q96HD9 319 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 IL17BQ9UHF5 180 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 IGKV3D-15A0A087WSY6 115 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 NUPR1O60356 82 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 WDR1O75083 606 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 LYSMD4Q5XG99 296 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 ACSM6Q6P461 480 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 TGIF2LYQ8IUE0 185 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 TUSC5Q8IXB3 177 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 OR5B12Q96R08 314 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 RBM7Q9Y580 266 aaKnown RBP11.36□□□□□ -0.59
SKA3-202ENST00000314759 LRP5LA4QPB2 252 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 CD33P20138 364 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 RELQ04864 619 aaPredicted RBP11.36□□□□□ -0.59
SKA3-202ENST00000314759 IQCJQ1A5X6 159 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 ZNF573Q86YE8 665 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 FGFRL1Q8N441 504 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 POM121L2Q96KW2 1035 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 LINC00470Q9BZP3 86 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 STRADBQ9C0K7 418 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 KCNS2Q9ULS6 477 aa11.36□□□□□ -0.59
SKA3-202ENST00000314759 DOCK7Q96N67 2140 aa11.35□□□□□ -0.59
SKA3-202ENST00000314759 NPSP0C0P6 89 aa11.35□□□□□ -0.59
SKA3-202ENST00000314759 RAB4AP20338 218 aa11.35□□□□□ -0.59
SKA3-202ENST00000314759 FAM3BP58499 235 aaPredicted RBP11.35□□□□□ -0.59
SKA3-202ENST00000314759 ESPL1Q14674 2120 aa11.35□□□□□ -0.59
SKA3-202ENST00000314759 Q6P435 159 aa11.35□□□□□ -0.59
SKA3-202ENST00000314759 TMEM14EPQ6UXP3 125 aa11.35□□□□□ -0.59
SKA3-202ENST00000314759 TMEM256Q8N2U0 113 aa11.35□□□□□ -0.59
SKA3-202ENST00000314759 OR5T1Q8NG75 326 aa11.35□□□□□ -0.59
SKA3-202ENST00000314759 PARLQ9H300 379 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms