RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 PGLYRP1O75594 196 aaPredicted RBP11.62□□□□□ -0.55
DDX54-202ENST00000314045 MISP3Q96FF7 219 aa11.62□□□□□ -0.55
DDX54-202ENST00000314045 RHOVQ96L33 236 aa11.62□□□□□ -0.55
DDX54-202ENST00000314045 COL4A3Q01955 1670 aa11.62□□□□□ -0.55
DDX54-202ENST00000314045 A0A1W2PN81 502 aa11.62□□□□□ -0.55
DDX54-202ENST00000314045 CRYM-AS1A6NIL9 109 aa11.62□□□□□ -0.55
DDX54-202ENST00000314045 SSTR5P35346 364 aa11.62□□□□□ -0.55
DDX54-202ENST00000314045 CHRNA7P36544 502 aa11.62□□□□□ -0.55
DDX54-202ENST00000314045 DYNLT3P51808 116 aa11.62□□□□□ -0.55
DDX54-202ENST00000314045 ANKRD55Q3KP44 614 aa11.62□□□□□ -0.55
DDX54-202ENST00000314045 SLC35E4Q6ICL7 350 aa11.62□□□□□ -0.55
DDX54-202ENST00000314045 CLEC2AQ6UVW9 174 aa11.62□□□□□ -0.55
DDX54-202ENST00000314045 UNQ6494/PRO21346Q6UXR6 183 aa11.62□□□□□ -0.55
DDX54-202ENST00000314045 PHYHIPLQ96FC7 376 aa11.62□□□□□ -0.55
DDX54-202ENST00000314045 OR51I2Q9H344 312 aa11.62□□□□□ -0.55
DDX54-202ENST00000314045 C19orf12Q9NSK7 152 aa11.62□□□□□ -0.55
DDX54-202ENST00000314045 POMT1Q9Y6A1 747 aa11.62□□□□□ -0.55
DDX54-202ENST00000314045 DOCK10Q96BY6 2186 aa11.62□□□□□ -0.55
DDX54-202ENST00000314045 DAOP14920 347 aa11.61□□□□□ -0.55
DDX54-202ENST00000314045 HTD2P86397 168 aa11.61□□□□□ -0.55
DDX54-202ENST00000314045 C20orf24Q9BUV8 137 aa11.61□□□□□ -0.55
DDX54-202ENST00000314045 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.61□□□□□ -0.55
DDX54-202ENST00000314045 MED19A0JLT2 244 aaPredicted RBP11.61□□□□□ -0.55
DDX54-202ENST00000314045 TAGLN2P37802 199 aaKnown RBP11.61□□□□□ -0.55
DDX54-202ENST00000314045 BPIFB3P59826 476 aa11.61□□□□□ -0.55
DDX54-202ENST00000314045 RPL11P62913 178 aaKnown RBP11.61□□□□□ -0.55
DDX54-202ENST00000314045 ZNF66Q6ZN08 573 aa11.61□□□□□ -0.55
DDX54-202ENST00000314045 OR4F5Q8NH21 305 aa11.61□□□□□ -0.55
DDX54-202ENST00000314045 ZNF596Q8TC21 504 aa11.61□□□□□ -0.55
DDX54-202ENST00000314045 OR4F4Q96R69 305 aa11.61□□□□□ -0.55
DDX54-202ENST00000314045 K7ENP7 123 aa11.61□□□□□ -0.55
DDX54-202ENST00000314045 SLC25A4P12235 298 aa11.61□□□□□ -0.55
DDX54-202ENST00000314045 RPS10P46783 165 aaKnown RBP11.61□□□□□ -0.55
DDX54-202ENST00000314045 ERVFRD-1P60508 538 aa11.61□□□□□ -0.55
DDX54-202ENST00000314045 ATP6V1FQ16864 119 aa11.61□□□□□ -0.55
DDX54-202ENST00000314045 BVESQ8NE79 360 aa11.61□□□□□ -0.55
DDX54-202ENST00000314045 TMEM147Q9BVK8 224 aa11.61□□□□□ -0.55
DDX54-202ENST00000314045 TMEM106BQ9NUM4 274 aa11.61□□□□□ -0.55
DDX54-202ENST00000314045 PRNDQ9UKY0 176 aa11.61□□□□□ -0.55
DDX54-202ENST00000314045 MBD3L4A6NDZ8 208 aaPredicted RBP11.6□□□□□ -0.55
DDX54-202ENST00000314045 MBD3L3A6NE82 208 aaPredicted RBP11.6□□□□□ -0.55
DDX54-202ENST00000314045 MBD3L5A6NJ08 208 aaPredicted RBP11.6□□□□□ -0.55
DDX54-202ENST00000314045 C17orf100A8MU93 164 aa11.6□□□□□ -0.55
DDX54-202ENST00000314045 COX7A2P2O60397 106 aa11.6□□□□□ -0.55
DDX54-202ENST00000314045 MIDNQ504T8 468 aa11.6□□□□□ -0.55
DDX54-202ENST00000314045 FFAR4Q5NUL3 377 aa11.6□□□□□ -0.55
DDX54-202ENST00000314045 ZCCHC24Q8N2G6 241 aaKnown RBP11.6□□□□□ -0.55
DDX54-202ENST00000314045 MBD3L2Q8NHZ7 208 aaPredicted RBP11.6□□□□□ -0.55
DDX54-202ENST00000314045 LEAP2Q969E1 77 aa11.6□□□□□ -0.55
DDX54-202ENST00000314045 BORCS7Q96B45 105 aa11.6□□□□□ -0.55
DDX54-202ENST00000314045 SH2D2AQ9NP31 389 aa11.6□□□□□ -0.55
DDX54-202ENST00000314045 RCC2Q9P258 522 aaKnown RBP11.6□□□□□ -0.55
DDX54-202ENST00000314045 ZNF727A8MUV8 499 aa11.6□□□□□ -0.55
DDX54-202ENST00000314045 TXNL1O43396 289 aa11.6□□□□□ -0.55
DDX54-202ENST00000314045 HPRT1P00492 218 aa11.6□□□□□ -0.55
DDX54-202ENST00000314045 OTX1P32242 354 aaPredicted RBP11.6□□□□□ -0.55
DDX54-202ENST00000314045 RPUSD4Q96CM3 377 aaKnown RBP11.6□□□□□ -0.55
DDX54-202ENST00000314045 MRPL37Q9BZE1 423 aaKnown RBP11.6□□□□□ -0.55
DDX54-202ENST00000314045 SEBOXQ9HB31 216 aaPredicted RBP11.6□□□□□ -0.55
DDX54-202ENST00000314045 MDFIC2A0A1B0GVS7 189 aa11.6□□□□□ -0.55
DDX54-202ENST00000314045 E9PQ18 207 aa11.6□□□□□ -0.55
DDX54-202ENST00000314045 PGA5P0DJD9 388 aa11.6□□□□□ -0.55
DDX54-202ENST00000314045 UCP3P55916 312 aa11.6□□□□□ -0.55
DDX54-202ENST00000314045 EWSR1Q01844 656 aaKnown RBP eCLIP11.6□□□□□ -0.55
DDX54-202ENST00000314045 ZNF561Q8N587 486 aa11.6□□□□□ -0.55
DDX54-202ENST00000314045 IDI2-AS1Q9NZ38 188 aa11.6□□□□□ -0.55
DDX54-202ENST00000314045 TNFSF18Q9UNG2 199 aa11.6□□□□□ -0.55
DDX54-202ENST00000314045 PTPRSQ13332 1948 aa11.6□□□□□ -0.55
DDX54-202ENST00000314045 C12orf77C9JDV5 145 aa11.6□□□□□ -0.55
DDX54-202ENST00000314045 FAM89BQ8N5H3 189 aa11.6□□□□□ -0.55
DDX54-202ENST00000314045 ZNF645Q8N7E2 425 aa11.6□□□□□ -0.55
DDX54-202ENST00000314045 LILRB1Q8NHL6 650 aaPredicted RBP11.6□□□□□ -0.55
DDX54-202ENST00000314045 C1RLQ9NZP8 487 aa11.6□□□□□ -0.55
DDX54-202ENST00000314045 MT-ND4LP03901 98 aa11.59□□□□□ -0.55
DDX54-202ENST00000314045 TIMM8BQ9Y5J9 83 aaPredicted RBP11.59□□□□□ -0.55
DDX54-202ENST00000314045 H2BFSP57053 126 aa11.59□□□□□ -0.55
DDX54-202ENST00000314045 HIST1H3AP68431 136 aa11.59□□□□□ -0.55
DDX54-202ENST00000314045 HIST2H3PS2Q5TEC6 136 aa11.59□□□□□ -0.55
DDX54-202ENST00000314045 TMEM65Q6PI78 240 aa11.59□□□□□ -0.55
DDX54-202ENST00000314045 FOXL2NBQ6ZUU3 175 aa11.59□□□□□ -0.55
DDX54-202ENST00000314045 HIST2H3AQ71DI3 136 aa11.59□□□□□ -0.55
DDX54-202ENST00000314045 TCTEX1D1Q8N7M0 179 aa11.59□□□□□ -0.55
DDX54-202ENST00000314045 JPT1Q9UK76 154 aa11.59□□□□□ -0.55
DDX54-202ENST00000314045 IGF2RP11717 2491 aa11.59□□□□□ -0.55
DDX54-202ENST00000314045 IGHV3-72A0A0B4J1Y9 119 aa11.59□□□□□ -0.55
DDX54-202ENST00000314045 RBP4P02753 201 aa11.59□□□□□ -0.55
DDX54-202ENST00000314045 MGST1P10620 155 aaKnown RBP11.59□□□□□ -0.55
DDX54-202ENST00000314045 SULT1A1P50225 295 aa11.59□□□□□ -0.55
DDX54-202ENST00000314045 ARF6P62330 175 aa11.59□□□□□ -0.55
DDX54-202ENST00000314045 ACSM6Q6P461 480 aa11.59□□□□□ -0.55
DDX54-202ENST00000314045 ZNF818PQ6ZRF7 136 aa11.59□□□□□ -0.55
DDX54-202ENST00000314045 FAM216BQ8N7L0 139 aa11.59□□□□□ -0.55
DDX54-202ENST00000314045 OR10C1Q96KK4 312 aa11.59□□□□□ -0.55
DDX54-202ENST00000314045 IGKV1-12A0A0C4DH73 117 aa11.58□□□□□ -0.55
DDX54-202ENST00000314045 F2RL2O00254 374 aa11.58□□□□□ -0.55
DDX54-202ENST00000314045 KCNAB3O43448 404 aa11.58□□□□□ -0.55
DDX54-202ENST00000314045 IGKV1D-12P01611 117 aa11.58□□□□□ -0.55
DDX54-202ENST00000314045 MMDQ15546 238 aa11.58□□□□□ -0.55
DDX54-202ENST00000314045 CXorf66Q5JRM2 361 aaPredicted RBP11.58□□□□□ -0.55
DDX54-202ENST00000314045 NCR3LG1Q68D85 454 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms