RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 NCOR1P1Q9H4R4 102 aa14.83□□□□□ -0.04
HMGA1-201ENST00000311487 ANXA10Q9UJ72 324 aa14.83□□□□□ -0.04
HMGA1-201ENST00000311487 ANAPC10Q9UM13 185 aa14.83□□□□□ -0.04
HMGA1-201ENST00000311487 HSPA12AO43301 675 aa14.82□□□□□ -0.04
HMGA1-201ENST00000311487 FPR2P25090 351 aa14.82□□□□□ -0.04
HMGA1-201ENST00000311487 RNASE10Q5GAN6 216 aaKnown RBP14.82□□□□□ -0.04
HMGA1-201ENST00000311487 KLF17Q5JT82 389 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-201ENST00000311487 RBMXL1Q96E39 390 aaKnown RBP14.82□□□□□ -0.04
HMGA1-201ENST00000311487 HYLS1Q96M11 299 aa14.82□□□□□ -0.04
HMGA1-201ENST00000311487 ZNF436Q9C0F3 470 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-201ENST00000311487 CENPVL3A0A0U1RRI6 287 aa14.82□□□□□ -0.04
HMGA1-201ENST00000311487 hCG_1809904A0A1W2PP81 198 aa14.82□□□□□ -0.04
HMGA1-201ENST00000311487 A0A1W2PPE2 198 aa14.82□□□□□ -0.04
HMGA1-201ENST00000311487 A0A1W2PR64 198 aa14.82□□□□□ -0.04
HMGA1-201ENST00000311487 A0A1W2PRV1 198 aa14.82□□□□□ -0.04
HMGA1-201ENST00000311487 SLC31A2O15432 143 aa14.82□□□□□ -0.04
HMGA1-201ENST00000311487 NFYAP23511 347 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-201ENST00000311487 PRTN3P24158 256 aa14.82□□□□□ -0.04
HMGA1-201ENST00000311487 CEACAM6P40199 344 aa14.82□□□□□ -0.04
HMGA1-201ENST00000311487 ZNF134P52741 427 aa14.82□□□□□ -0.04
HMGA1-201ENST00000311487 CHRFAM7AQ494W8 412 aa14.82□□□□□ -0.04
HMGA1-201ENST00000311487 LAMTOR1Q6IAA8 161 aa14.82□□□□□ -0.04
HMGA1-201ENST00000311487 MOB1BQ7L9L4 216 aa14.82□□□□□ -0.04
HMGA1-201ENST00000311487 ABHD12Q8N2K0 398 aa14.82□□□□□ -0.04
HMGA1-201ENST00000311487 OR13C8Q8NGS7 320 aa14.82□□□□□ -0.04
HMGA1-201ENST00000311487 SLC25A21Q9BQT8 299 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-201ENST00000311487 TMEM133Q9H2Q1 129 aa14.82□□□□□ -0.04
HMGA1-201ENST00000311487 SLC2A8Q9NY64 477 aa14.82□□□□□ -0.04
HMGA1-201ENST00000311487 SCP2D1Q9UJQ7 156 aa14.82□□□□□ -0.04
HMGA1-201ENST00000311487 SESN1Q9Y6P5 492 aa14.82□□□□□ -0.04
HMGA1-201ENST00000311487 DISC1C4P0D8 188 aa14.81□□□□□ -0.04
HMGA1-201ENST00000311487 GATA3P23771 443 aa14.81□□□□□ -0.04
HMGA1-201ENST00000311487 HRH1P35367 487 aa14.81□□□□□ -0.04
HMGA1-201ENST00000311487 KIR3DL3Q8N743 410 aa14.81□□□□□ -0.04
HMGA1-201ENST00000311487 MGAT4CQ9UBM8 478 aa14.81□□□□□ -0.04
HMGA1-201ENST00000311487 PSG11Q9UQ72 335 aa14.81□□□□□ -0.04
HMGA1-201ENST00000311487 IGHV2-26A0A0B4J1V2 119 aa14.8□□□□□ -0.04
HMGA1-201ENST00000311487 INAFM1C9JVW0 142 aa14.8□□□□□ -0.04
HMGA1-201ENST00000311487 FOSL1P15407 271 aa14.8□□□□□ -0.04
HMGA1-201ENST00000311487 KIR2DS4P43632 304 aa14.8□□□□□ -0.04
HMGA1-201ENST00000311487 KIR2DS1Q14954 304 aa14.8□□□□□ -0.04
HMGA1-201ENST00000311487 SCGB2B2Q4G0G5 96 aa14.8□□□□□ -0.04
HMGA1-201ENST00000311487 SMUG1Q53HV7 270 aa14.8□□□□□ -0.04
HMGA1-201ENST00000311487 ALX4Q9H161 411 aaPredicted RBP14.8□□□□□ -0.04
HMGA1-201ENST00000311487 RANBP3Q9H6Z4 567 aaPredicted RBP14.8□□□□□ -0.04
HMGA1-201ENST00000311487 GFOD1Q9NXC2 390 aa14.8□□□□□ -0.04
HMGA1-201ENST00000311487 RNF150Q9ULK6 438 aa14.8□□□□□ -0.04
HMGA1-201ENST00000311487 ANK3Q12955 4377 aaKnown RBP14.8□□□□□ -0.04
HMGA1-201ENST00000311487 F2RL2O00254 374 aa14.8□□□□□ -0.04
HMGA1-201ENST00000311487 ARG1P05089 322 aa14.8□□□□□ -0.04
HMGA1-201ENST00000311487 TBPP20226 339 aa14.8□□□□□ -0.04
HMGA1-201ENST00000311487 TRAT1Q6PIZ9 186 aa14.8□□□□□ -0.04
HMGA1-201ENST00000311487 LHFPL4Q7Z7J7 247 aa14.8□□□□□ -0.04
HMGA1-201ENST00000311487 BCL6BQ8N143 479 aaPredicted RBP14.8□□□□□ -0.04
HMGA1-201ENST00000311487 PIP4P2Q8N4L2 257 aa14.8□□□□□ -0.04
HMGA1-201ENST00000311487 OR4A4PQ8NGN8 299 aa14.8□□□□□ -0.04
HMGA1-201ENST00000311487 PRRT1Q99946 306 aa14.8□□□□□ -0.04
HMGA1-201ENST00000311487 LINC00574Q9H8X3 128 aa14.8□□□□□ -0.04
HMGA1-201ENST00000311487 CBX5P45973 191 aa14.79□□□□□ -0.04
HMGA1-201ENST00000311487 MORN2Q502X0 79 aa14.79□□□□□ -0.04
HMGA1-201ENST00000311487 C1orf122Q6ZSJ8 110 aa14.79□□□□□ -0.04
HMGA1-201ENST00000311487 C9orf62Q8N4C0 152 aa14.79□□□□□ -0.04
HMGA1-201ENST00000311487 OR11H4Q8NGC9 324 aa14.79□□□□□ -0.04
HMGA1-201ENST00000311487 OR10J5Q8NHC4 309 aa14.79□□□□□ -0.04
HMGA1-201ENST00000311487 MRGPRFQ96AM1 343 aa14.79□□□□□ -0.04
HMGA1-201ENST00000311487 G3V3Q6 166 aa14.78□□□□□ -0.04
HMGA1-201ENST00000311487 J3QLI3 93 aa14.78□□□□□ -0.04
HMGA1-201ENST00000311487 ST8SIA5O15466 376 aa14.78□□□□□ -0.04
HMGA1-201ENST00000311487 ZBTB25P24278 435 aa14.78□□□□□ -0.04
HMGA1-201ENST00000311487 LDLRAD2Q5SZI1 272 aa14.78□□□□□ -0.04
HMGA1-201ENST00000311487 OR5AP2Q8NGF4 316 aa14.78□□□□□ -0.04
HMGA1-201ENST00000311487 SLA2Q9H6Q3 261 aa14.78□□□□□ -0.04
HMGA1-201ENST00000311487 RDH8Q9NYR8 311 aa14.78□□□□□ -0.04
HMGA1-201ENST00000311487 EHFQ9NZC4 300 aa14.78□□□□□ -0.04
HMGA1-201ENST00000311487 NSD1Q96L73 2696 aaPredicted RBP14.78□□□□□ -0.04
HMGA1-201ENST00000311487 OR3A3P47888 321 aa14.78□□□□□ -0.04
HMGA1-201ENST00000311487 DIAPH2-AS1Q14236 149 aa14.78□□□□□ -0.04
HMGA1-201ENST00000311487 CT45A1Q5HYN5 189 aa14.78□□□□□ -0.04
HMGA1-201ENST00000311487 GPR157Q5UAW9 335 aa14.78□□□□□ -0.04
HMGA1-201ENST00000311487 OR5H2Q8NGV7 314 aa14.78□□□□□ -0.04
HMGA1-201ENST00000311487 CT45A3Q8NHU0 189 aa14.78□□□□□ -0.04
HMGA1-201ENST00000311487 CLEC7AQ9BXN2 247 aa14.78□□□□□ -0.04
HMGA1-201ENST00000311487 HEXA-AS1Q9H8Q6 139 aa14.78□□□□□ -0.04
HMGA1-201ENST00000311487 PIPOXQ9P0Z9 390 aa14.78□□□□□ -0.04
HMGA1-201ENST00000311487 MGAT4AQ9UM21 535 aa14.78□□□□□ -0.04
HMGA1-201ENST00000311487 VSIG4Q9Y279 399 aa14.78□□□□□ -0.04
HMGA1-201ENST00000311487 FN1P02751 2386 aaKnown RBP14.77□□□□□ -0.04
HMGA1-201ENST00000311487 OR4E1P0C645 316 aa14.77□□□□□ -0.04
HMGA1-201ENST00000311487 OR5H8P0DN80 308 aa14.77□□□□□ -0.04
HMGA1-201ENST00000311487 HTD2P86397 168 aa14.77□□□□□ -0.04
HMGA1-201ENST00000311487 C4orf46Q504U0 113 aa14.77□□□□□ -0.04
HMGA1-201ENST00000311487 TMED4Q7Z7H5 227 aa14.77□□□□□ -0.04
HMGA1-201ENST00000311487 OR13D1Q8NGV5 346 aa14.77□□□□□ -0.04
HMGA1-201ENST00000311487 ZNF431Q8TF32 576 aaPredicted RBP14.77□□□□□ -0.04
HMGA1-201ENST00000311487 CHIAQ9BZP6 476 aa14.77□□□□□ -0.04
HMGA1-201ENST00000311487 HSPB11Q9Y547 144 aa14.77□□□□□ -0.04
HMGA1-201ENST00000311487 NIPBLQ6KC79 2804 aaeCLIP14.77□□□□□ -0.056e-7■■□□□ 12.3
HMGA1-201ENST00000311487 TRBV6-7A0A0A0MS04 114 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 MDFIC2A0A1B0GVS7 189 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 TOR1AO14656 332 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms