RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 CALYQ9NYX4 217 aa17.65■□□□□ 0.42
ATG4D-201ENST00000309469 PSG11Q9UQ72 335 aa17.65■□□□□ 0.42
ATG4D-201ENST00000309469 KIAA2026Q5HYC2 2103 aa17.65■□□□□ 0.42
ATG4D-201ENST00000309469 TMEM178BH3BS89 294 aa17.64■□□□□ 0.42
ATG4D-201ENST00000309469 ST8SIA5O15466 376 aa17.64■□□□□ 0.42
ATG4D-201ENST00000309469 YPEL1O60688 119 aa17.64■□□□□ 0.42
ATG4D-201ENST00000309469 MORN2Q502X0 79 aa17.64■□□□□ 0.42
ATG4D-201ENST00000309469 CCDC28AQ8IWP9 274 aa17.64■□□□□ 0.42
ATG4D-201ENST00000309469 C1orf87Q8N0U7 546 aa17.64■□□□□ 0.42
ATG4D-201ENST00000309469 RNASE11Q8TAA1 199 aaKnown RBP17.64■□□□□ 0.42
ATG4D-201ENST00000309469 YPEL2Q96QA6 119 aa17.64■□□□□ 0.42
ATG4D-201ENST00000309469 CISD1Q9NZ45 108 aaKnown RBP17.64■□□□□ 0.42
ATG4D-201ENST00000309469 FBXL17Q9UF56 701 aa17.64■□□□□ 0.42
ATG4D-201ENST00000309469 TRAV38-1A0A0B4J264 116 aa17.64■□□□□ 0.41
ATG4D-201ENST00000309469 TEX46H3BTG2 121 aa17.64■□□□□ 0.41
ATG4D-201ENST00000309469 PITX3O75364 302 aa17.64■□□□□ 0.41
ATG4D-201ENST00000309469 LOXL3P58215 753 aa17.64■□□□□ 0.41
ATG4D-201ENST00000309469 RPL30P62888 115 aaKnown RBP17.64■□□□□ 0.41
ATG4D-201ENST00000309469 EIF5AP63241 154 aaKnown RBP17.64■□□□□ 0.41
ATG4D-201ENST00000309469 RPL7L1Q6DKI1 246 aaKnown RBP17.64■□□□□ 0.41
ATG4D-201ENST00000309469 SPTA1P02549 2419 aa17.63■□□□□ 0.41
ATG4D-201ENST00000309469 SIAH2O43255 324 aa17.63■□□□□ 0.41
ATG4D-201ENST00000309469 IGKV1-5P01602 117 aa17.63■□□□□ 0.41
ATG4D-201ENST00000309469 PVALBP20472 110 aaPredicted RBP17.63■□□□□ 0.41
ATG4D-201ENST00000309469 EPHA1P21709 976 aa17.63■□□□□ 0.41
ATG4D-201ENST00000309469 LPAR6P43657 344 aa17.63■□□□□ 0.41
ATG4D-201ENST00000309469 CATR1Q13166 79 aa17.63■□□□□ 0.41
ATG4D-201ENST00000309469 C17orf58Q2M2W7 97 aa17.63■□□□□ 0.41
ATG4D-201ENST00000309469 HSD17B13Q7Z5P4 300 aaPredicted RBP17.63■□□□□ 0.41
ATG4D-201ENST00000309469 LRRC20Q8TCA0 184 aa17.63■□□□□ 0.41
ATG4D-201ENST00000309469 FAM216AQ8WUB2 273 aa17.63■□□□□ 0.41
ATG4D-201ENST00000309469 CCL17Q92583 94 aa17.63■□□□□ 0.41
ATG4D-201ENST00000309469 MAGT1Q9H0U3 335 aa17.63■□□□□ 0.41
ATG4D-201ENST00000309469 BARX1Q9HBU1 254 aaPredicted RBP17.63■□□□□ 0.41
ATG4D-201ENST00000309469 RAB9BQ9NP90 201 aa17.63■□□□□ 0.41
ATG4D-201ENST00000309469 TMEM106BQ9NUM4 274 aa17.63■□□□□ 0.41
ATG4D-201ENST00000309469 PPIAL4EA0A075B759 164 aa17.62■□□□□ 0.41
ATG4D-201ENST00000309469 TRGV10A0A0A0MS01 117 aa17.62■□□□□ 0.41
ATG4D-201ENST00000309469 NKX6-3A6NJ46 265 aa17.62■□□□□ 0.41
ATG4D-201ENST00000309469 PPIAL4DF5H284 164 aa17.62■□□□□ 0.41
ATG4D-201ENST00000309469 PPIAL4FP0DN26 164 aa17.62■□□□□ 0.41
ATG4D-201ENST00000309469 BTNL3Q6UXE8 466 aa17.62■□□□□ 0.41
ATG4D-201ENST00000309469 ZNF66Q6ZN08 573 aa17.62■□□□□ 0.41
ATG4D-201ENST00000309469 TMED6Q8WW62 240 aa17.62■□□□□ 0.41
ATG4D-201ENST00000309469 PPIAL4AQ9Y536 164 aa17.62■□□□□ 0.41
ATG4D-201ENST00000309469 CHD8Q9HCK8 2581 aa17.62■□□□□ 0.41
ATG4D-201ENST00000309469 KBTBD11-OT1A0A1B0GTJ5 212 aa17.62■□□□□ 0.41
ATG4D-201ENST00000309469 TMEM8BA6NDV4 472 aa17.62■□□□□ 0.41
ATG4D-201ENST00000309469 TMPRSS2O15393 492 aa17.62■□□□□ 0.41
ATG4D-201ENST00000309469 SSSCA1O60232 199 aa17.62■□□□□ 0.41
ATG4D-201ENST00000309469 FGF2P09038 288 aa17.62■□□□□ 0.41
ATG4D-201ENST00000309469 OMGP23515 440 aa17.62■□□□□ 0.41
ATG4D-201ENST00000309469 AKR1C2P52895 323 aa17.62■□□□□ 0.41
ATG4D-201ENST00000309469 CLEC9AQ6UXN8 241 aa17.62■□□□□ 0.41
ATG4D-201ENST00000309469 Q6ZRM9 215 aa17.62■□□□□ 0.41
ATG4D-201ENST00000309469 BSCL2Q96G97 398 aaPredicted RBP17.62■□□□□ 0.41
ATG4D-201ENST00000309469 SMIM3Q9BZL3 60 aa17.62■□□□□ 0.41
ATG4D-201ENST00000309469 CLN8Q9UBY8 286 aa17.62■□□□□ 0.41
ATG4D-201ENST00000309469 DYSFO75923 2080 aa17.61■□□□□ 0.41
ATG4D-201ENST00000309469 PIEZO1Q92508 2521 aa17.61■□□□□ 0.41
ATG4D-201ENST00000309469 SHOXO15266 292 aa17.61■□□□□ 0.41
ATG4D-201ENST00000309469 CLDN1O95832 211 aa17.61■□□□□ 0.41
ATG4D-201ENST00000309469 GAPDHP04406 335 aaKnown RBP17.61■□□□□ 0.41
ATG4D-201ENST00000309469 IZUMO4Q1ZYL8 232 aa17.61■□□□□ 0.41
ATG4D-201ENST00000309469 EIF4E3Q8N5X7 224 aaKnown RBP17.61■□□□□ 0.41
ATG4D-201ENST00000309469 OR2C3Q8N628 320 aa17.61■□□□□ 0.41
ATG4D-201ENST00000309469 TCTEX1D2Q8WW35 142 aa17.61■□□□□ 0.41
ATG4D-201ENST00000309469 ICE1Q9Y2F5 2266 aa17.61■□□□□ 0.41
ATG4D-201ENST00000309469 A8MXK9 166 aa17.6■□□□□ 0.41
ATG4D-201ENST00000309469 FGF16O43320 207 aa17.6■□□□□ 0.41
ATG4D-201ENST00000309469 RAMP3O60896 148 aa17.6■□□□□ 0.41
ATG4D-201ENST00000309469 JTBO76095 146 aa17.6■□□□□ 0.41
ATG4D-201ENST00000309469 CLDN14O95500 239 aa17.6■□□□□ 0.41
ATG4D-201ENST00000309469 MMP9P14780 707 aa17.6■□□□□ 0.41
ATG4D-201ENST00000309469 VAMP2P63027 116 aa17.6■□□□□ 0.41
ATG4D-201ENST00000309469 SWI5Q1ZZU3 235 aa17.6■□□□□ 0.41
ATG4D-201ENST00000309469 Q3ZCU0 254 aa17.6■□□□□ 0.41
ATG4D-201ENST00000309469 FGFRL1Q8N441 504 aa17.6■□□□□ 0.41
ATG4D-201ENST00000309469 TCTEX1D1Q8N7M0 179 aa17.6■□□□□ 0.41
ATG4D-201ENST00000309469 RNF141Q8WVD5 230 aa17.6■□□□□ 0.41
ATG4D-201ENST00000309469 CORO2AQ92828 525 aa17.6■□□□□ 0.41
ATG4D-201ENST00000309469 HSD17B10Q99714 261 aaKnown RBP17.6■□□□□ 0.41
ATG4D-201ENST00000309469 CACNG5Q9UF02 275 aa17.6■□□□□ 0.41
ATG4D-201ENST00000309469 CACNA1DQ01668 2161 aa17.6■□□□□ 0.41
ATG4D-201ENST00000309469 MED19A0JLT2 244 aaPredicted RBP17.6■□□□□ 0.41
ATG4D-201ENST00000309469 KIAA1324LA8MWY0 1029 aaPredicted RBP17.6■□□□□ 0.41
ATG4D-201ENST00000309469 NXPH3O95157 252 aa17.6■□□□□ 0.41
ATG4D-201ENST00000309469 ZP3P21754 424 aa17.6■□□□□ 0.41
ATG4D-201ENST00000309469 GPR12P47775 334 aa17.6■□□□□ 0.41
ATG4D-201ENST00000309469 BRWD1-AS2P59051 145 aa17.6■□□□□ 0.41
ATG4D-201ENST00000309469 OR2B11Q5JQS5 317 aa17.6■□□□□ 0.41
ATG4D-201ENST00000309469 TCF23Q7RTU1 214 aa17.6■□□□□ 0.41
ATG4D-201ENST00000309469 SPAG16Q8N0X2 631 aa17.6■□□□□ 0.41
ATG4D-201ENST00000309469 FAM212BQ9NTI7 297 aaPredicted RBP17.6■□□□□ 0.41
ATG4D-201ENST00000309469 ATRXP46100 2492 aa17.6■□□□□ 0.41
ATG4D-201ENST00000309469 FAM24AA6NFZ4 105 aa17.59■□□□□ 0.41
ATG4D-201ENST00000309469 C17orf98A8MV24 154 aa17.59■□□□□ 0.41
ATG4D-201ENST00000309469 WRBO00258 174 aa17.59■□□□□ 0.41
ATG4D-201ENST00000309469 CHST1O43916 411 aa17.59■□□□□ 0.41
ATG4D-201ENST00000309469 CAV2P51636 162 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms