RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 FAM90A15PP0C7V4 464 aa9.49□□□□□ -0.89
PTPN7-201ENST00000309017 FAM90A13PP0C7W8 464 aa9.49□□□□□ -0.89
PTPN7-201ENST00000309017 FAM90A14PP0C7W9 464 aa9.49□□□□□ -0.89
PTPN7-201ENST00000309017 FAM90A24PP0C7X0 464 aa9.49□□□□□ -0.89
PTPN7-201ENST00000309017 FGF5P12034 268 aa9.49□□□□□ -0.89
PTPN7-201ENST00000309017 DEFA4P12838 97 aa9.49□□□□□ -0.89
PTPN7-201ENST00000309017 SPINK9Q5DT21 86 aa9.49□□□□□ -0.89
PTPN7-201ENST00000309017 ZNF808Q8N4W9 903 aaPredicted RBP9.49□□□□□ -0.89
PTPN7-201ENST00000309017 SMRP1Q8NCR6 262 aa9.49□□□□□ -0.89
PTPN7-201ENST00000309017 MS4A10Q96PG2 267 aa9.49□□□□□ -0.89
PTPN7-201ENST00000309017 MRPL37Q9BZE1 423 aaKnown RBP9.49□□□□□ -0.89
PTPN7-201ENST00000309017 A0A1W2PQM1 296 aa9.49□□□□□ -0.89
PTPN7-201ENST00000309017 IFNL4K9M1U5 179 aa9.49□□□□□ -0.89
PTPN7-201ENST00000309017 COX5AP20674 150 aa9.49□□□□□ -0.89
PTPN7-201ENST00000309017 HOXA6P31267 233 aa9.49□□□□□ -0.89
PTPN7-201ENST00000309017 ZNF816Q0VGE8 651 aaPredicted RBP9.49□□□□□ -0.89
PTPN7-201ENST00000309017 TGIF2LYQ8IUE0 185 aa9.49□□□□□ -0.89
PTPN7-201ENST00000309017 RNASEH2CQ8TDP1 164 aaKnown RBP9.49□□□□□ -0.89
PTPN7-201ENST00000309017 TMEM170AQ8WVE7 144 aa9.49□□□□□ -0.89
PTPN7-201ENST00000309017 NEIL1Q96FI4 390 aaPredicted RBP9.49□□□□□ -0.89
PTPN7-201ENST00000309017 SEMA5BQ9P283 1151 aa9.49□□□□□ -0.89
PTPN7-201ENST00000309017 CTXND1A0A1B0GTU2 59 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 CCKARP32238 428 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 PPP1CBP62140 327 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 GNB2P62879 340 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 PLP2Q04941 152 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 FAM58AQ8N1B3 248 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 ANAPC16Q96DE5 110 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 ZNF552Q9H707 407 aaPredicted RBP9.48□□□□□ -0.89
PTPN7-201ENST00000309017 IL17BQ9UHF5 180 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 MYO18BQ8IUG5 2567 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 EXPH5Q8NEV8 1989 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 ZFHX4Q86UP3 3567 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 OTX2P32243 289 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 ZXDAP98168 799 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 HAPLN4Q86UW8 402 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 OR10P1Q8NGE3 313 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 CRIM1Q9NZV1 1036 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 CLN8Q9UBY8 286 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 FREM1Q5H8C1 2179 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 A0A0G2JMM0 328 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 A0A1W2PPB8 328 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 A0A1W2PRS3 328 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 KIR3DP1A8MWS1 328 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 C11orf94C9JXX5 98 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 TNFRSF9Q07011 255 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 PRSS8Q16651 343 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 CEACAM21Q3KPI0 293 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 TOMM20LQ6UXN7 152 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 MCEMP1Q8IX19 187 aa9.48□□□□□ -0.89
PTPN7-201ENST00000309017 LRP5LA4QPB2 252 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 TMEM250H0YL14 139 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 TOX3O15405 576 aaPredicted RBP9.47□□□□□ -0.89
PTPN7-201ENST00000309017 NGFP01138 241 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 IGKV1D-33P01593 117 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 IGKV1-33P01594 117 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 IGKV1-5P01602 117 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 CEACAM6P40199 344 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 MSMO1Q15800 293 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 ACSM6Q6P461 480 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 PCSK4Q6UW60 755 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 BEND2Q8NDZ0 799 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 FSCN3Q9NQT6 498 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 MUC6Q6W4X9 2439 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 C1QTNF9BB2RNN3 333 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 SPATA46Q5T0L3 261 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 ZNF324BQ6AW86 544 aaPredicted RBP9.47□□□□□ -0.89
PTPN7-201ENST00000309017 ZNF295-AS1Q8N0V1 137 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 HLA-CQ95604 372 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 OR6C3Q9NZP0 311 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 A0A1B0GUS0 222 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 A0A1W2PPV4 95 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 ZNF716A6NP11 495 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 MBP02144 154 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 SRD5A2P31213 254 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 IGFBP7Q16270 282 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 TEX38Q6PEX7 206 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 FGFRL1Q8N441 504 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 KCNE4Q8WWG9 221 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 LSM10Q969L4 123 aaKnown RBP9.47□□□□□ -0.89
PTPN7-201ENST00000309017 APOBEC3DQ96AK3 386 aaPredicted RBP9.47□□□□□ -0.89
PTPN7-201ENST00000309017 TBX15Q96SF7 602 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 C1QTNF5Q9BXJ0 243 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 SNHG12Q9BXW3 62 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 MANBALQ9NQG1 85 aa9.47□□□□□ -0.89
PTPN7-201ENST00000309017 ATG2AQ2TAZ0 1938 aa9.46□□□□□ -0.89
PTPN7-201ENST00000309017 IGHV1-45A0A0A0MS14 117 aa9.46□□□□□ -0.89
PTPN7-201ENST00000309017 MDFIC2A0A1B0GVS7 189 aa9.46□□□□□ -0.89
PTPN7-201ENST00000309017 IGKV1-39P01597 117 aa9.46□□□□□ -0.89
PTPN7-201ENST00000309017 IGKV1D-39P04432 117 aa9.46□□□□□ -0.89
PTPN7-201ENST00000309017 RFPL3SP0C7P2 107 aa9.46□□□□□ -0.89
PTPN7-201ENST00000309017 G6PCP35575 357 aa9.46□□□□□ -0.89
PTPN7-201ENST00000309017 MPLP40238 635 aa9.46□□□□□ -0.89
PTPN7-201ENST00000309017 WNT5AP41221 380 aa9.46□□□□□ -0.89
PTPN7-201ENST00000309017 Q6ZS49 121 aa9.46□□□□□ -0.89
PTPN7-201ENST00000309017 ZNF573Q86YE8 665 aa9.46□□□□□ -0.89
PTPN7-201ENST00000309017 CISD2Q8N5K1 135 aaKnown RBP9.46□□□□□ -0.89
PTPN7-201ENST00000309017 PRDM14Q9GZV8 571 aa9.46□□□□□ -0.89
PTPN7-201ENST00000309017 DLL3Q9NYJ7 618 aa9.46□□□□□ -0.89
PTPN7-201ENST00000309017 NAGKQ9UJ70 344 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms