RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 GZMHP20718 246 aa16.65■□□□□ 0.26
USP48-201ENST00000308271 WDFY1Q8IWB7 410 aa16.65■□□□□ 0.26
USP48-201ENST00000308271 OR2Z1Q8NG97 314 aa16.65■□□□□ 0.26
USP48-201ENST00000308271 LRRC29Q8WV35 223 aa16.65■□□□□ 0.26
USP48-201ENST00000308271 FAM122AQ96E09 287 aa16.65■□□□□ 0.26
USP48-201ENST00000308271 CCL11P51671 97 aa16.65■□□□□ 0.26
USP48-201ENST00000308271 C10orf128Q5T292 105 aa16.65■□□□□ 0.26
USP48-201ENST00000308271 HEPN1Q6WQI6 88 aa16.65■□□□□ 0.26
USP48-201ENST00000308271 OR6C3Q9NZP0 311 aa16.65■□□□□ 0.26
USP48-201ENST00000308271 VENTXO95231 258 aa16.65■□□□□ 0.26
USP48-201ENST00000308271 FGFRL1Q8N441 504 aa16.65■□□□□ 0.26
USP48-201ENST00000308271 ZNF738Q8NE65 137 aa16.65■□□□□ 0.26
USP48-201ENST00000308271 WDR54Q9H977 334 aa16.65■□□□□ 0.26
USP48-201ENST00000308271 IL19Q9UHD0 177 aa16.65■□□□□ 0.26
USP48-201ENST00000308271 TP53BP1Q12888 1972 aaPredicted RBP16.64■□□□□ 0.25
USP48-201ENST00000308271 APCSP02743 223 aa16.64■□□□□ 0.25
USP48-201ENST00000308271 RNF224P0DH78 156 aa16.64■□□□□ 0.25
USP48-201ENST00000308271 FAM166AQ6J272 317 aa16.64■□□□□ 0.25
USP48-201ENST00000308271 TGIF2LYQ8IUE0 185 aa16.64■□□□□ 0.25
USP48-201ENST00000308271 SAXO1Q8IYX7 474 aa16.64■□□□□ 0.25
USP48-201ENST00000308271 ZNF488Q96MN9 340 aa16.64■□□□□ 0.25
USP48-201ENST00000308271 MYLKQ15746 1914 aa16.64■□□□□ 0.25
USP48-201ENST00000308271 TSC2P49815 1807 aa16.64■□□□□ 0.25
USP48-201ENST00000308271 SPRED2Q7Z698 418 aa16.64■□□□□ 0.25
USP48-201ENST00000308271 CLDND2Q8NHS1 167 aa16.64■□□□□ 0.25
USP48-201ENST00000308271 BCL2L2Q92843 193 aaPredicted RBP16.64■□□□□ 0.25
USP48-201ENST00000308271 TIMP4Q99727 224 aa16.64■□□□□ 0.25
USP48-201ENST00000308271 UQCR10Q9UDW1 63 aa16.64■□□□□ 0.25
USP48-201ENST00000308271 NPY1RP25929 384 aa16.64■□□□□ 0.25
USP48-201ENST00000308271 HTR1DP28221 377 aa16.64■□□□□ 0.25
USP48-201ENST00000308271 OPRK1P41145 380 aa16.64■□□□□ 0.25
USP48-201ENST00000308271 SSPNQ14714 243 aa16.64■□□□□ 0.25
USP48-201ENST00000308271 LURAP1LQ8IV03 231 aa16.64■□□□□ 0.25
USP48-201ENST00000308271 LCN2P80188 198 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 VMA21Q3ZAQ7 101 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 CRIPAKQ8N1N5 446 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 TIMM9Q9Y5J7 89 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 HEATR5BQ9P2D3 2071 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 LDLRAD4O15165 306 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 SP1P08047 785 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 C1QL4Q86Z23 238 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 NPVFQ9HCQ7 196 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 LNP1A1A4G5 178 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 UCP1P25874 307 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 FCER1GP30273 86 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 PRSS3P2Q8NHM4 247 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 HIST1H2BKO60814 126 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 HIST1H2BJP06899 126 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 HIST1H2BOP23527 126 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 HIST1H2BBP33778 126 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 HIST1H2BDP58876 126 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 HIST1H2BCP62807 126 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 HIST2H2BEQ16778 126 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.63■□□□□ 0.25
USP48-201ENST00000308271 HIST1H2BHQ93079 126 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 HIST1H2BNQ99877 126 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 HIST1H2BMQ99879 126 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 CHRNA10Q9GZZ6 450 aa16.63■□□□□ 0.25
USP48-201ENST00000308271 NHLH1Q02575 133 aa16.62■□□□□ 0.25
USP48-201ENST00000308271 KCNMB1Q16558 191 aa16.62■□□□□ 0.25
USP48-201ENST00000308271 FAM89BQ8N5H3 189 aa16.62■□□□□ 0.25
USP48-201ENST00000308271 NHLRC2Q8NBF2 726 aa16.62■□□□□ 0.25
USP48-201ENST00000308271 SDF2L1Q9HCN8 221 aa16.62■□□□□ 0.25
USP48-201ENST00000308271 PLSCR2Q9NRY7 297 aa16.62■□□□□ 0.25
USP48-201ENST00000308271 K7N7A8 449 aa16.62■□□□□ 0.25
USP48-201ENST00000308271 RIPPLY2Q5TAB7 128 aa16.62■□□□□ 0.25
USP48-201ENST00000308271 FNDC7Q5VTL7 733 aa16.62■□□□□ 0.25
USP48-201ENST00000308271 OR2V2Q96R30 315 aa16.62■□□□□ 0.25
USP48-201ENST00000308271 PLA2G3Q9NZ20 509 aa16.62■□□□□ 0.25
USP48-201ENST00000308271 PXMP4Q9Y6I8 212 aa16.62■□□□□ 0.25
USP48-201ENST00000308271 STARD6P59095 220 aa16.62■□□□□ 0.25
USP48-201ENST00000308271 TNFRSF9Q07011 255 aa16.62■□□□□ 0.25
USP48-201ENST00000308271 NDUFAF3Q9BU61 184 aa16.62■□□□□ 0.25
USP48-201ENST00000308271 OR1A1Q9P1Q5 309 aa16.62■□□□□ 0.25
USP48-201ENST00000308271 GNB1P62873 340 aa16.62■□□□□ 0.25
USP48-201ENST00000308271 MRPL18Q9H0U6 180 aaKnown RBP16.62■□□□□ 0.25
USP48-201ENST00000308271 M0R1B8 84 aa16.61■□□□□ 0.25
USP48-201ENST00000308271 CD82P27701 267 aa16.61■□□□□ 0.25
USP48-201ENST00000308271 MRPS11P82912 194 aaKnown RBP16.61■□□□□ 0.25
USP48-201ENST00000308271 OR5R1Q8NH85 324 aa16.61■□□□□ 0.25
USP48-201ENST00000308271 NDFIP1Q9BT67 221 aa16.61■□□□□ 0.25
USP48-201ENST00000308271 WIPI2Q9Y4P8 454 aa16.61■□□□□ 0.25
USP48-201ENST00000308271 IGKV3D-11A0A0A0MRZ8 115 aa16.61■□□□□ 0.25
USP48-201ENST00000308271 PMCHL1Q16048 86 aa16.61■□□□□ 0.25
USP48-201ENST00000308271 NPIPB7O75200 414 aa16.6■□□□□ 0.25
USP48-201ENST00000308271 COL10A1Q03692 680 aa16.6■□□□□ 0.25
USP48-201ENST00000308271 SPATA45Q537H7 98 aa16.6■□□□□ 0.25
USP48-201ENST00000308271 LHFPL1Q86WI0 220 aa16.6■□□□□ 0.25
USP48-201ENST00000308271 EFEMP2O95967 443 aa16.6■□□□□ 0.25
USP48-201ENST00000308271 HLA-DQA1P01909 254 aa16.6■□□□□ 0.25
USP48-201ENST00000308271 ICAM4Q14773 271 aa16.6■□□□□ 0.25
USP48-201ENST00000308271 FLVCR1-AS1Q8TAF5 88 aa16.6■□□□□ 0.25
USP48-201ENST00000308271 IL36GQ9NZH8 169 aa16.6■□□□□ 0.25
USP48-201ENST00000308271 TMEM210A6NLX4 147 aa16.6■□□□□ 0.25
USP48-201ENST00000308271 ISLRO14498 428 aa16.6■□□□□ 0.25
USP48-201ENST00000308271 OR5AL1P0C617 328 aa16.6■□□□□ 0.25
USP48-201ENST00000308271 ADCYAP1P18509 176 aa16.6■□□□□ 0.25
USP48-201ENST00000308271 GNG10P50151 68 aa16.6■□□□□ 0.25
USP48-201ENST00000308271 TINAGQ9UJW2 476 aa16.6■□□□□ 0.25
USP48-201ENST00000308271 PRNDQ9UKY0 176 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms