RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 LINC01551Q86U37 167 aa9.05□□□□□ -0.96
MSRB3-201ENST00000308259 NOXO1Q8NFA2 376 aa9.05□□□□□ -0.96
MSRB3-201ENST00000308259 OR1A1Q9P1Q5 309 aa9.05□□□□□ -0.96
MSRB3-201ENST00000308259 OR2T8A6NH00 312 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 ZFAND5O76080 213 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 GYPAP02724 150 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 ZNF43P17038 809 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 CBLN1P23435 193 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 IER3P46695 156 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 IGLV3-21P80748 117 aaPredicted RBP9.04□□□□□ -0.96
MSRB3-201ENST00000308259 RELBQ01201 579 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 IL11RAQ14626 422 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 KIAA1644Q3SXP7 199 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 KRTCAP3Q53RY4 240 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 PLEKHF2Q9H8W4 249 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 ERRFI1Q9UJM3 462 aaPredicted RBP9.04□□□□□ -0.96
MSRB3-201ENST00000308259 ZDBF2Q9HCK1 2354 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 TRAV36DV7A0A075B6V5 113 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 WIPF3A6NGB9 483 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 AHRRA9YTQ3 701 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 SOCS1O15524 211 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 P04436 131 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 ZNF883P0CG24 379 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 RSPO4Q2I0M5 234 aaPredicted RBP9.04□□□□□ -0.96
MSRB3-201ENST00000308259 HLA-DRB5Q30154 266 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 NAA38Q9BRA0 125 aaKnown RBP9.04□□□□□ -0.96
MSRB3-201ENST00000308259 GPR84Q9NQS5 396 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 ST3GAL6Q9Y274 331 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 LOC105371242A0A075B767 164 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 DPRXA6NFQ7 191 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 TRAPPC2LH3BP13 241 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 K7N7A8 449 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 NPIPB7O75200 414 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 ANOS1P23352 680 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 MAS1LP35410 378 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 C1orf140Q5VVS0 124 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 PET117Q6UWS5 81 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 C8orf44Q96CB5 159 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 FNDC4Q9H6D8 234 aaPredicted RBP9.04□□□□□ -0.96
MSRB3-201ENST00000308259 PILRBQ9UKJ0 227 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 SLC5A6Q9Y289 635 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 GTF3C1Q12789 2109 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 IGHV2-70DA0A0C4DH43 119 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 RBFOX2O43251 390 aaKnown RBP eCLIP9.04□□□□□ -0.96
MSRB3-201ENST00000308259 POU3F1Q03052 451 aaPredicted RBP9.04□□□□□ -0.96
MSRB3-201ENST00000308259 CCDC71LQ8N9Z2 235 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 DEFB124Q8NES8 71 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 OR10P1Q8NGE3 313 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 CLDND2Q8NHS1 167 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 KCNG3Q8TAE7 436 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 ZNF721Q8TF20 911 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 TMEM204Q9BSN7 226 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 SLC25A22Q9H936 323 aa9.04□□□□□ -0.96
MSRB3-201ENST00000308259 TBL2Q9Y4P3 447 aaKnown RBP9.04□□□□□ -0.96
MSRB3-201ENST00000308259 IGLV1-36A0A0B4J1U3 117 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 CCL7P80098 99 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 PAX2Q02962 417 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 SLC23A3Q6PIS1 610 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 LINC00696Q6ZRV3 163 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 SRSF8Q9BRL6 282 aaKnown RBP9.03□□□□□ -0.96
MSRB3-201ENST00000308259 ANAPC13Q9BS18 74 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 RSG1Q9BU20 258 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 MUC3AQ02505 3323 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 PHF3Q92576 2039 aaKnown RBP9.03□□□□□ -0.96
MSRB3-201ENST00000308259 IGHV1OR21-1A0A087WYE8 117 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 SNURFLB1AK76 121 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 ZNF260Q3ZCT1 412 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 FAM69BQ5VUD6 431 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 MRPL30Q8TCC3 161 aaKnown RBP9.03□□□□□ -0.96
MSRB3-201ENST00000308259 SPACA9Q96E40 222 aaPredicted RBP9.03□□□□□ -0.96
MSRB3-201ENST00000308259 PECRQ9BY49 303 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 OR10A2Q9H208 303 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 HIF1ANQ9NWT6 349 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 SDK2Q58EX2 2172 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 LOC102723971A0A1B0GUV8 181 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 A0A1W2PP11 408 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 RHBDL1O75783 438 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 LIPFP07098 398 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 PTGER4P35408 488 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 ARF6P62330 175 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 IL13RA2Q14627 380 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 CDCP2Q5VXM1 449 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 DNM1P46Q6ZS02 220 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 TGIF2LYQ8IUE0 185 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 OR13G1Q8NGZ3 307 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 CPT1CQ8TCG5 803 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 CDH20Q9HBT6 801 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 THYN1Q9P016 225 aa9.03□□□□□ -0.96
MSRB3-201ENST00000308259 HYPMO75409 117 aa9.02□□□□□ -0.96
MSRB3-201ENST00000308259 OR52N5Q8NH56 324 aa9.02□□□□□ -0.96
MSRB3-201ENST00000308259 ANAPC16Q96DE5 110 aa9.02□□□□□ -0.96
MSRB3-201ENST00000308259 THADAQ6YHU6 1953 aa9.02□□□□□ -0.96
MSRB3-201ENST00000308259 URB1O60287 2271 aaKnown RBP9.02□□□□□ -0.97
MSRB3-201ENST00000308259 CDAP32320 146 aa9.02□□□□□ -0.97
MSRB3-201ENST00000308259 TAS2R30P59541 319 aa9.02□□□□□ -0.97
MSRB3-201ENST00000308259 EMC4Q5J8M3 183 aa9.02□□□□□ -0.97
MSRB3-201ENST00000308259 OR52M1Q8NGK5 317 aa9.02□□□□□ -0.97
MSRB3-201ENST00000308259 TMEM230Q96A57 120 aa9.02□□□□□ -0.97
MSRB3-201ENST00000308259 PLSCR4Q9NRQ2 329 aa9.02□□□□□ -0.97
MSRB3-201ENST00000308259 PLPP3O14495 311 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms