RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 IGKV1-12A0A0C4DH73 117 aa11.54□□□□□ -0.56
SEC23A-201ENST00000307712 M0R1X1 148 aa11.54□□□□□ -0.56
SEC23A-201ENST00000307712 HSBP1O75506 76 aa11.54□□□□□ -0.56
SEC23A-201ENST00000307712 IGKV1D-12P01611 117 aa11.54□□□□□ -0.56
SEC23A-201ENST00000307712 FGFRL1Q8N441 504 aa11.54□□□□□ -0.56
SEC23A-201ENST00000307712 ZNF441Q8N8Z8 693 aa11.54□□□□□ -0.56
SEC23A-201ENST00000307712 OR5A2Q8NGI9 324 aa11.54□□□□□ -0.56
SEC23A-201ENST00000307712 E9PLN8 166 aa11.54□□□□□ -0.56
SEC23A-201ENST00000307712 VAMP3Q15836 100 aa11.54□□□□□ -0.56
SEC23A-201ENST00000307712 ROS1P08922 2347 aa11.54□□□□□ -0.56
SEC23A-201ENST00000307712 CER1O95813 267 aa11.54□□□□□ -0.56
SEC23A-201ENST00000307712 PRR27Q6MZM9 219 aa11.54□□□□□ -0.56
SEC23A-201ENST00000307712 WDFY1Q8IWB7 410 aa11.54□□□□□ -0.56
SEC23A-201ENST00000307712 LRTM2Q8N967 370 aa11.54□□□□□ -0.56
SEC23A-201ENST00000307712 NDUFAF3Q9BU61 184 aa11.54□□□□□ -0.56
SEC23A-201ENST00000307712 EGLN1Q9GZT9 426 aa11.54□□□□□ -0.56
SEC23A-201ENST00000307712 VSIRQ9H7M9 311 aa11.54□□□□□ -0.56
SEC23A-201ENST00000307712 EP300Q09472 2414 aaPredicted RBP11.54□□□□□ -0.56
SEC23A-201ENST00000307712 CNOT1A5YKK6 2376 aaKnown RBP11.53□□□□□ -0.56
SEC23A-201ENST00000307712 RIF1Q5UIP0 2472 aaKnown RBP11.53□□□□□ -0.56
SEC23A-201ENST00000307712 IGHV5-10-1A0A0J9YXX1 117 aa11.53□□□□□ -0.56
SEC23A-201ENST00000307712 ZNF253O75346 499 aa11.53□□□□□ -0.56
SEC23A-201ENST00000307712 ID3Q02535 119 aa11.53□□□□□ -0.56
SEC23A-201ENST00000307712 JOSD1Q15040 202 aaPredicted RBP11.53□□□□□ -0.56
SEC23A-201ENST00000307712 P2RY6Q15077 328 aa11.53□□□□□ -0.56
SEC23A-201ENST00000307712 CDPF1Q6NVV7 123 aa11.53□□□□□ -0.56
SEC23A-201ENST00000307712 CYP2G1PQ6ZSU1 146 aa11.53□□□□□ -0.56
SEC23A-201ENST00000307712 CISD2Q8N5K1 135 aaKnown RBP11.53□□□□□ -0.56
SEC23A-201ENST00000307712 MPC1Q9Y5U8 109 aa11.53□□□□□ -0.56
SEC23A-201ENST00000307712 SPTA1P02549 2419 aa11.53□□□□□ -0.56
SEC23A-201ENST00000307712 SNURFLB1AK76 121 aa11.53□□□□□ -0.56
SEC23A-201ENST00000307712 M0QZK8 103 aa11.53□□□□□ -0.56
SEC23A-201ENST00000307712 GGCTO75223 188 aaKnown RBP11.53□□□□□ -0.56
SEC23A-201ENST00000307712 CEACAM21Q3KPI0 293 aa11.53□□□□□ -0.56
SEC23A-201ENST00000307712 Q6ZN92 141 aa11.53□□□□□ -0.56
SEC23A-201ENST00000307712 TMEM56Q96MV1 263 aa11.53□□□□□ -0.56
SEC23A-201ENST00000307712 TMEM56-RWDD3S4R434 201 aa11.53□□□□□ -0.56
SEC23A-201ENST00000307712 TRAV38-1A0A0B4J264 116 aa11.53□□□□□ -0.56
SEC23A-201ENST00000307712 AMBPP02760 352 aa11.53□□□□□ -0.56
SEC23A-201ENST00000307712 PTTG1IPP53801 180 aa11.53□□□□□ -0.56
SEC23A-201ENST00000307712 SLC35B1P78383 322 aa11.53□□□□□ -0.56
SEC23A-201ENST00000307712 SPINK14Q6IE38 97 aa11.53□□□□□ -0.56
SEC23A-201ENST00000307712 TMEM54Q969K7 222 aa11.53□□□□□ -0.56
SEC23A-201ENST00000307712 S1PR3Q99500 378 aa11.53□□□□□ -0.56
SEC23A-201ENST00000307712 WDR61Q9GZS3 305 aaKnown RBP11.53□□□□□ -0.56
SEC23A-201ENST00000307712 PNRC2Q9NPJ4 139 aaKnown RBP11.53□□□□□ -0.56
SEC23A-201ENST00000307712 LAMTOR5O43504 91 aa11.52□□□□□ -0.56
SEC23A-201ENST00000307712 TCF21O43680 179 aa11.52□□□□□ -0.56
SEC23A-201ENST00000307712 SPCS3P61009 180 aa11.52□□□□□ -0.56
SEC23A-201ENST00000307712 SPSB3Q6PJ21 355 aa11.52□□□□□ -0.56
SEC23A-201ENST00000307712 KLHDC1Q8N7A1 406 aa11.52□□□□□ -0.56
SEC23A-201ENST00000307712 EDARADDQ8WWZ3 215 aa11.52□□□□□ -0.56
SEC23A-201ENST00000307712 PHF7Q9BWX1 381 aaPredicted RBP11.52□□□□□ -0.56
SEC23A-201ENST00000307712 PLA2G2EQ9NZK7 142 aa11.52□□□□□ -0.56
SEC23A-201ENST00000307712 IGKV1-27A0A075B6S5 117 aa11.52□□□□□ -0.57
SEC23A-201ENST00000307712 IL15RAQ13261 267 aa11.52□□□□□ -0.57
SEC23A-201ENST00000307712 HERPUD1Q15011 391 aa11.52□□□□□ -0.57
SEC23A-201ENST00000307712 C3AR1Q16581 482 aa11.52□□□□□ -0.57
SEC23A-201ENST00000307712 NFAM1Q8NET5 270 aaPredicted RBP11.52□□□□□ -0.57
SEC23A-201ENST00000307712 TMEM68Q96MH6 324 aa11.52□□□□□ -0.57
SEC23A-201ENST00000307712 LIME1Q9H400 295 aa11.52□□□□□ -0.57
SEC23A-201ENST00000307712 DLL3Q9NYJ7 618 aa11.52□□□□□ -0.57
SEC23A-201ENST00000307712 hCG_38984A0A1B0GV85 526 aa11.52□□□□□ -0.57
SEC23A-201ENST00000307712 A0A1W2PR77 199 aa11.52□□□□□ -0.57
SEC23A-201ENST00000307712 SYNGR3O43761 229 aa11.52□□□□□ -0.57
SEC23A-201ENST00000307712 Q8IYB0 196 aa11.52□□□□□ -0.57
SEC23A-201ENST00000307712 OR1L6Q8NGR2 347 aa11.52□□□□□ -0.57
SEC23A-201ENST00000307712 DAZAP1Q96EP5 407 aaKnown RBP11.52□□□□□ -0.57
SEC23A-201ENST00000307712 CHRNA10Q9GZZ6 450 aa11.52□□□□□ -0.57
SEC23A-201ENST00000307712 SIT1Q9Y3P8 196 aa11.52□□□□□ -0.57
SEC23A-201ENST00000307712 BPTFQ12830 3046 aa11.52□□□□□ -0.57
SEC23A-201ENST00000307712 C20orf202A1L168 122 aa11.51□□□□□ -0.57
SEC23A-201ENST00000307712 TOX3O15405 576 aaPredicted RBP11.51□□□□□ -0.57
SEC23A-201ENST00000307712 PDE6DO43924 150 aa11.51□□□□□ -0.57
SEC23A-201ENST00000307712 SRP14P37108 136 aaKnown RBP11.51□□□□□ -0.57
SEC23A-201ENST00000307712 STARD4Q96DR4 205 aa11.51□□□□□ -0.57
SEC23A-201ENST00000307712 PSMG3Q9BT73 122 aaPredicted RBP11.51□□□□□ -0.57
SEC23A-201ENST00000307712 PLSCR2Q9NRY7 297 aa11.51□□□□□ -0.57
SEC23A-201ENST00000307712 J3QT63 122 aa11.51□□□□□ -0.57
SEC23A-201ENST00000307712 FGF5P12034 268 aa11.51□□□□□ -0.57
SEC23A-201ENST00000307712 CTSSP25774 331 aa11.51□□□□□ -0.57
SEC23A-201ENST00000307712 GNG4P50150 75 aa11.51□□□□□ -0.57
SEC23A-201ENST00000307712 RPL23P62829 140 aaKnown RBP11.51□□□□□ -0.57
SEC23A-201ENST00000307712 MRPL54Q6P161 138 aaKnown RBP11.51□□□□□ -0.57
SEC23A-201ENST00000307712 SPEM1Q8N4L4 309 aa11.51□□□□□ -0.57
SEC23A-201ENST00000307712 TPRX1Q8N7U7 411 aa11.51□□□□□ -0.57
SEC23A-201ENST00000307712 LRRK1Q38SD2 2015 aa11.51□□□□□ -0.57
SEC23A-201ENST00000307712 TMEM250H0YL14 139 aa11.51□□□□□ -0.57
SEC23A-201ENST00000307712 HGFACQ04756 655 aa11.51□□□□□ -0.57
SEC23A-201ENST00000307712 HLA-DRB5Q30154 266 aa11.51□□□□□ -0.57
SEC23A-201ENST00000307712 DOCK11Q5JSL3 2073 aa11.51□□□□□ -0.57
SEC23A-201ENST00000307712 ZNF525Q8N782 197 aa11.51□□□□□ -0.57
SEC23A-201ENST00000307712 OR2Y1Q8NGV0 311 aa11.51□□□□□ -0.57
SEC23A-201ENST00000307712 ABHD5Q8WTS1 349 aa11.51□□□□□ -0.57
SEC23A-201ENST00000307712 VPS25Q9BRG1 176 aa11.51□□□□□ -0.57
SEC23A-201ENST00000307712 LRFN3Q9BTN0 628 aa11.51□□□□□ -0.57
SEC23A-201ENST00000307712 ZNF106Q9H2Y7 1883 aaKnown RBP11.51□□□□□ -0.57
SEC23A-201ENST00000307712 CD46P15529 392 aa11.5□□□□□ -0.57
SEC23A-201ENST00000307712 EPHA8P29322 1005 aaPredicted RBP11.5□□□□□ -0.57
SEC23A-201ENST00000307712 IL11RAQ14626 422 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms