RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ACY3Q96HD9 319 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 IMMP2LQ96T52 175 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 ZDHHC11Q9H8X9 412 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 HSPB7Q9UBY9 170 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 SDK2Q58EX2 2172 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 UNC13CQ8NB66 2214 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 BORCS7-ASMTA0A0B4J1R7 106 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 IGHV3-15A0A0B4J1V0 119 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 CST7O76096 145 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 IGHG3P01860 377 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 OPN1MWP04001 364 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 RFPL3SP0C7P2 107 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 OPN1MW2P0DN77 364 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 OPN1MW3P0DN78 364 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 DEFA6Q01524 100 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 ARFRP1Q13795 201 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 GABRA6Q16445 453 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 C1orf229Q6ZS94 237 aaPredicted RBP4.56□□□□□ -1.68
VPS50-202ENST00000305866 TIPARPQ7Z3E1 657 aaKnown RBP4.56□□□□□ -1.68
VPS50-202ENST00000305866 MKXQ8IYA7 352 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 IL22RA1Q8N6P7 574 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 GNPNAT1Q96EK6 184 aaPredicted RBP4.56□□□□□ -1.68
VPS50-202ENST00000305866 HIST1H2AAQ96QV6 131 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 C20orf144Q9BQM9 153 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 MAGT1Q9H0U3 335 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 ZNF701Q9NV72 531 aaPredicted RBP4.56□□□□□ -1.68
VPS50-202ENST00000305866 FUT9Q9Y231 359 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 ST3GAL6Q9Y274 331 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 PI4KAP42356 2102 aa4.56□□□□□ -1.68
VPS50-202ENST00000305866 A0A1W2PNU3 283 aaPredicted RBP4.55□□□□□ -1.68
VPS50-202ENST00000305866 A0A1W2PR80 420 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 CLDN34H7C241 214 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 ITGB1BP1O14713 200 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 TGOLN2O43493 480 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 SOX15O60248 233 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 CGAP01215 116 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 NKX2-1P43699 371 aaPredicted RBP4.55□□□□□ -1.68
VPS50-202ENST00000305866 UBE2KP61086 200 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 GNB1P62873 340 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 MALLQ13021 153 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 CLN3Q13286 438 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 TMEM41BQ5BJD5 291 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 CARD17Q5XLA6 110 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 FBXW9Q5XUX1 488 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 SLC35E4Q6ICL7 350 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 AAED1Q7RTV5 226 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 LINC01551Q86U37 167 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 FAM90A1Q86YD7 464 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 TMEM256Q8N2U0 113 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 OR10A7Q8NGE5 316 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 SPIN2AQ99865 258 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 SPIN2BQ9BPZ2 258 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 CHODLQ9H9P2 273 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 PLEK2Q9NYT0 353 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 SLC7A11Q9UPY5 501 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 CACNA1EQ15878 2313 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 F2Z2F3 143 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 TMEM250H0YL14 139 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 RRHO14718 337 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 CFHR2P36980 270 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 FOXG1P55316 489 aaPredicted RBP4.55□□□□□ -1.68
VPS50-202ENST00000305866 TMPRSS3P57727 454 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 SERF2P84101 59 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 ZXDAP98168 799 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 FOXL1Q12952 345 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 SPIN3Q5JUX0 258 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 C6orf15Q6UXA7 325 aaPredicted RBP4.55□□□□□ -1.68
VPS50-202ENST00000305866 MRGPRGQ86SM5 289 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 Q8IYB0 196 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 C1orf162Q8NEQ5 155 aaPredicted RBP4.55□□□□□ -1.68
VPS50-202ENST00000305866 CT55Q8WUE5 264 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 BORCS8Q96FH0 119 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 RBM14Q96PK6 669 aaKnown RBP4.55□□□□□ -1.68
VPS50-202ENST00000305866 ELOVL5Q9NYP7 299 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 UBE2J1Q9Y385 318 aaPredicted RBP4.55□□□□□ -1.68
VPS50-202ENST00000305866 URGCP-MRPS24S4R325 110 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 F5P12259 2224 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 IQCF6A8MYZ5 107 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 FSTL3O95633 263 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 CRYABP02511 175 aaKnown RBP4.55□□□□□ -1.68
VPS50-202ENST00000305866 C1QTNF9P0C862 333 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 PSG2P11465 335 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 CD99P14209 185 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 BRS3P32247 399 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 PDZD11Q5EBL8 140 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 NUFIP2Q7Z417 695 aaKnown RBP4.55□□□□□ -1.68
VPS50-202ENST00000305866 C11orf53Q8IXP5 236 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 ZDHHC23Q8IYP9 409 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 ZNF611Q8N823 705 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 CD300LFQ8TDQ1 290 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 RAB40CQ96S21 281 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 LINC00574Q9H8X3 128 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 OR1A1Q9P1Q5 309 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 DKK4Q9UBT3 224 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 PRSS50Q9UI38 385 aa4.55□□□□□ -1.68
VPS50-202ENST00000305866 BOKQ9UMX3 212 aaPredicted RBP4.55□□□□□ -1.68
VPS50-202ENST00000305866 C9orf172C9J069 976 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 F5H5K5 113 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 G3V3Y1 287 aa4.54□□□□□ -1.68
VPS50-202ENST00000305866 SEC16AO15027 2179 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms