RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 F8P00451 2351 aa7.68□□□□□ -1.18
RFX3-201ENST00000302303 HSPA12AO43301 675 aa7.68□□□□□ -1.18
RFX3-201ENST00000302303 AMY2AP04746 511 aa7.68□□□□□ -1.18
RFX3-201ENST00000302303 OR8U9P0C7N5 309 aa7.68□□□□□ -1.18
RFX3-201ENST00000302303 GNRHRP30968 328 aa7.68□□□□□ -1.18
RFX3-201ENST00000302303 TRIQKQ629K1 86 aa7.68□□□□□ -1.18
RFX3-201ENST00000302303 NCR3LG1Q68D85 454 aa7.68□□□□□ -1.18
RFX3-201ENST00000302303 ZNF57Q68EA5 555 aaPredicted RBP7.68□□□□□ -1.18
RFX3-201ENST00000302303 Q71RC1 249 aaPredicted RBP7.68□□□□□ -1.18
RFX3-201ENST00000302303 BCL6BQ8N143 479 aaPredicted RBP7.68□□□□□ -1.18
RFX3-201ENST00000302303 OR6F1Q8NGZ6 308 aa7.68□□□□□ -1.18
RFX3-201ENST00000302303 OR8U1Q8NH10 309 aa7.68□□□□□ -1.18
RFX3-201ENST00000302303 TERB2Q8NHR7 220 aa7.68□□□□□ -1.18
RFX3-201ENST00000302303 CREB3L1Q96BA8 519 aa7.68□□□□□ -1.18
RFX3-201ENST00000302303 GINS4Q9BRT9 223 aa7.68□□□□□ -1.18
RFX3-201ENST00000302303 ABHD14AQ9BUJ0 271 aa7.68□□□□□ -1.18
RFX3-201ENST00000302303 RAB9BQ9NP90 201 aa7.68□□□□□ -1.18
RFX3-201ENST00000302303 YAE1D1Q9NRH1 226 aa7.68□□□□□ -1.18
RFX3-201ENST00000302303 RNF150Q9ULK6 438 aa7.68□□□□□ -1.18
RFX3-201ENST00000302303 NPFFO15130 113 aa7.67□□□□□ -1.18
RFX3-201ENST00000302303 ARG1P05089 322 aa7.67□□□□□ -1.18
RFX3-201ENST00000302303 SAA4P35542 130 aa7.67□□□□□ -1.18
RFX3-201ENST00000302303 CCR6P51684 374 aa7.67□□□□□ -1.18
RFX3-201ENST00000302303 UCP3P55916 312 aa7.67□□□□□ -1.18
RFX3-201ENST00000302303 BRWD1-AS2P59051 145 aa7.67□□□□□ -1.18
RFX3-201ENST00000302303 ASAH1Q13510 395 aa7.67□□□□□ -1.18
RFX3-201ENST00000302303 MEF2DQ14814 521 aa7.67□□□□□ -1.18
RFX3-201ENST00000302303 MIDNQ504T8 468 aa7.67□□□□□ -1.18
RFX3-201ENST00000302303 PLA1AQ53H76 456 aa7.67□□□□□ -1.18
RFX3-201ENST00000302303 FBLN7Q53RD9 439 aa7.67□□□□□ -1.18
RFX3-201ENST00000302303 CLEC9AQ6UXN8 241 aa7.67□□□□□ -1.18
RFX3-201ENST00000302303 ZNF833PQ6ZTB9 187 aa7.67□□□□□ -1.18
RFX3-201ENST00000302303 C9orf139Q6ZV77 190 aa7.67□□□□□ -1.18
RFX3-201ENST00000302303 DRAM1Q8N682 238 aa7.67□□□□□ -1.18
RFX3-201ENST00000302303 BORCS5Q969J3 196 aa7.67□□□□□ -1.18
RFX3-201ENST00000302303 GPHA2Q96T91 129 aa7.67□□□□□ -1.18
RFX3-201ENST00000302303 CCL28Q9NRJ3 127 aa7.67□□□□□ -1.18
RFX3-201ENST00000302303 SDHAF2Q9NX18 166 aa7.67□□□□□ -1.18
RFX3-201ENST00000302303 SONP18583 2426 aaKnown RBP7.67□□□□□ -1.18
RFX3-201ENST00000302303 SAA2-SAA4A0A096LPE2 208 aa7.66□□□□□ -1.18
RFX3-201ENST00000302303 A0A0U1RQK1 487 aa7.66□□□□□ -1.18
RFX3-201ENST00000302303 LYRM1O43325 122 aa7.66□□□□□ -1.18
RFX3-201ENST00000302303 RGS11O94810 467 aa7.66□□□□□ -1.18
RFX3-201ENST00000302303 SAA2P0DJI9 122 aaPredicted RBP7.66□□□□□ -1.18
RFX3-201ENST00000302303 SLC6A1P30531 599 aa7.66□□□□□ -1.18
RFX3-201ENST00000302303 PRRX1P54821 245 aa7.66□□□□□ -1.18
RFX3-201ENST00000302303 AP3S2P59780 193 aa7.66□□□□□ -1.18
RFX3-201ENST00000302303 TSPAN5P62079 268 aa7.66□□□□□ -1.18
RFX3-201ENST00000302303 RPL39P5Q59GN2 51 aa7.66□□□□□ -1.18
RFX3-201ENST00000302303 ZNF818PQ6ZRF7 136 aa7.66□□□□□ -1.18
RFX3-201ENST00000302303 OR2AK2Q8NG84 335 aa7.66□□□□□ -1.18
RFX3-201ENST00000302303 NANPQ8TBE9 248 aa7.66□□□□□ -1.18
RFX3-201ENST00000302303 PIFOQ8TCI5 191 aa7.66□□□□□ -1.18
RFX3-201ENST00000302303 MARCH1Q8TCQ1 289 aa7.66□□□□□ -1.18
RFX3-201ENST00000302303 EDARADDQ8WWZ3 215 aa7.66□□□□□ -1.18
RFX3-201ENST00000302303 ZNF48Q96MX3 618 aaPredicted RBP7.66□□□□□ -1.18
RFX3-201ENST00000302303 RTBDNQ9BSG5 229 aaPredicted RBP7.66□□□□□ -1.18
RFX3-201ENST00000302303 RSRP1Q9BUV0 290 aa7.66□□□□□ -1.18
RFX3-201ENST00000302303 OR2D2Q9H210 308 aa7.66□□□□□ -1.18
RFX3-201ENST00000302303 PRDM13Q9H4Q3 707 aa7.66□□□□□ -1.18
RFX3-201ENST00000302303 DPM3Q9P2X0 92 aa7.66□□□□□ -1.18
RFX3-201ENST00000302303 NUP50Q9UKX7 468 aa7.66□□□□□ -1.18
RFX3-201ENST00000302303 GPR132Q9UNW8 380 aa7.66□□□□□ -1.18
RFX3-201ENST00000302303 VSIG4Q9Y279 399 aa7.66□□□□□ -1.18
RFX3-201ENST00000302303 FN1P02751 2386 aaKnown RBP7.65□□□□□ -1.18
RFX3-201ENST00000302303 A0A1W2PPI3 338 aa7.65□□□□□ -1.18
RFX3-201ENST00000302303 IFNA6P05013 189 aa7.65□□□□□ -1.18
RFX3-201ENST00000302303 CT45A6P0DMU7 189 aa7.65□□□□□ -1.18
RFX3-201ENST00000302303 CT45A5P0DMU8 189 aa7.65□□□□□ -1.18
RFX3-201ENST00000302303 CT45A7P0DMV0 189 aa7.65□□□□□ -1.18
RFX3-201ENST00000302303 HTR1DP28221 377 aa7.65□□□□□ -1.18
RFX3-201ENST00000302303 LUMP51884 338 aaPredicted RBP7.65□□□□□ -1.18
RFX3-201ENST00000302303 FXYD4P59646 89 aa7.65□□□□□ -1.18
RFX3-201ENST00000302303 RPL30P62888 115 aaKnown RBP7.65□□□□□ -1.18
RFX3-201ENST00000302303 BAMBIQ13145 260 aa7.65□□□□□ -1.18
RFX3-201ENST00000302303 HABP2Q14520 560 aaPredicted RBP7.65□□□□□ -1.18
RFX3-201ENST00000302303 TPTE2P1Q5T6R2 138 aa7.65□□□□□ -1.18
RFX3-201ENST00000302303 MINOS1Q5TGZ0 78 aa7.65□□□□□ -1.18
RFX3-201ENST00000302303 GPR157Q5UAW9 335 aa7.65□□□□□ -1.18
RFX3-201ENST00000302303 IDO2Q6ZQW0 420 aa7.65□□□□□ -1.18
RFX3-201ENST00000302303 LYG1Q8N1E2 194 aa7.65□□□□□ -1.18
RFX3-201ENST00000302303 FAM216AQ8WUB2 273 aa7.65□□□□□ -1.18
RFX3-201ENST00000302303 RTN4IP1Q8WWV3 396 aaPredicted RBP7.65□□□□□ -1.18
RFX3-201ENST00000302303 DDB2Q92466 427 aa7.65□□□□□ -1.18
RFX3-201ENST00000302303 CFHR4Q92496 578 aa7.65□□□□□ -1.18
RFX3-201ENST00000302303 MALSU1Q96EH3 234 aa7.65□□□□□ -1.18
RFX3-201ENST00000302303 C7orf50Q9BRJ6 194 aaKnown RBP7.65□□□□□ -1.18
RFX3-201ENST00000302303 MEGF9Q9H1U4 602 aa7.65□□□□□ -1.18
RFX3-201ENST00000302303 C5orf66Q9H5L9 145 aa7.65□□□□□ -1.18
RFX3-201ENST00000302303 MCUBQ9NWR8 336 aa7.65□□□□□ -1.18
RFX3-201ENST00000302303 ZNF221Q9UK13 617 aa7.65□□□□□ -1.18
RFX3-201ENST00000302303 TBL2Q9Y4P3 447 aaKnown RBP7.65□□□□□ -1.18
RFX3-201ENST00000302303 MINOS1-NBL1R4GNA1 71 aa7.65□□□□□ -1.18
RFX3-201ENST00000302303 NSD1Q96L73 2696 aaPredicted RBP7.65□□□□□ -1.19
RFX3-201ENST00000302303 MDFIC2A0A1B0GVS7 189 aa7.64□□□□□ -1.19
RFX3-201ENST00000302303 NAP1L6A6NFF2 107 aa7.64□□□□□ -1.19
RFX3-201ENST00000302303 FAM90A9PA6NNJ1 464 aa7.64□□□□□ -1.19
RFX3-201ENST00000302303 LINC00473A8K010 186 aa7.64□□□□□ -1.19
RFX3-201ENST00000302303 DISC1C4P0D8 188 aa7.64□□□□□ -1.19
RFX3-201ENST00000302303 INAFM1C9JVW0 142 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms