RNA–Protein interactions for RNA: ENST00000300213.8

CCNDBP1-201, Transcript of cyclin D1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNDBP1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-201ENST00000300213 GCM1Q9NP62 436 aa12.58□□□□□ -0.4
CCNDBP1-201ENST00000300213 FGF21Q9NSA1 209 aa12.58□□□□□ -0.4
CCNDBP1-201ENST00000300213 ICE1Q9Y2F5 2266 aa12.58□□□□□ -0.4
CCNDBP1-201ENST00000300213 COX5AP20674 150 aa12.58□□□□□ -0.4
CCNDBP1-201ENST00000300213 RANP62826 216 aaKnown RBP12.58□□□□□ -0.4
CCNDBP1-201ENST00000300213 C9orf50Q5SZB4 431 aa12.58□□□□□ -0.4
CCNDBP1-201ENST00000300213 BADQ92934 168 aa12.58□□□□□ -0.4
CCNDBP1-201ENST00000300213 HS3ST6Q96QI5 342 aa12.58□□□□□ -0.4
CCNDBP1-201ENST00000300213 ALKBH7Q9BT30 221 aaPredicted RBP12.58□□□□□ -0.4
CCNDBP1-201ENST00000300213 WIPI2Q9Y4P8 454 aa12.58□□□□□ -0.4
CCNDBP1-201ENST00000300213 FOXI3A8MTJ6 420 aaPredicted RBP12.58□□□□□ -0.4
CCNDBP1-201ENST00000300213 CCL25O15444 150 aa12.58□□□□□ -0.4
CCNDBP1-201ENST00000300213 FASLGP48023 281 aa12.58□□□□□ -0.4
CCNDBP1-201ENST00000300213 RBM11P57052 281 aaKnown RBP12.58□□□□□ -0.4
CCNDBP1-201ENST00000300213 IGFBP7Q16270 282 aa12.58□□□□□ -0.4
CCNDBP1-201ENST00000300213 SAPCD1Q5SSQ6 148 aa12.58□□□□□ -0.4
CCNDBP1-201ENST00000300213 FAM58AQ8N1B3 248 aa12.58□□□□□ -0.4
CCNDBP1-201ENST00000300213 WDR61Q9GZS3 305 aaKnown RBP12.58□□□□□ -0.4
CCNDBP1-201ENST00000300213 SPTY2D1-AS1A0A0U1RR47 76 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 TRAPPC2LH3BP13 241 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 GDF9O60383 454 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 MGST1P10620 155 aaKnown RBP12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 LTC4SQ16873 150 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 NMSQ5H8A3 153 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 MRGPRX4Q96LA9 322 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 RASL10BQ96S79 203 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 DOCK10Q96BY6 2186 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 A0A096LPE4 126 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 A0A1W2PPZ6 126 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 ZNF253O75346 499 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 CBR3O75828 277 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 IFI6P09912 130 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 MSX1P28360 303 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 TFF3Q07654 80 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 TMEM56Q96MV1 263 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 FAM234AQ9H0X4 552 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 TMEM56-RWDD3S4R434 201 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 KIR2DL5BA0A0G2JN68 375 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 KIR2DL5BA0A0G2JPC4 375 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 SERF2P84101 59 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 MKXQ8IYA7 352 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 KIR2DL5AQ8N109 375 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 OR10P1Q8NGE3 313 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 BORCS7Q96B45 105 aa12.57□□□□□ -0.4
CCNDBP1-201ENST00000300213 CRIP3Q6Q6R5 217 aa12.56□□□□□ -0.4
CCNDBP1-201ENST00000300213 ZNF501Q96CX3 271 aaPredicted RBP12.56□□□□□ -0.4
CCNDBP1-201ENST00000300213 OR1A1Q9P1Q5 309 aa12.56□□□□□ -0.4
CCNDBP1-201ENST00000300213 TRAPPC2LQ9UL33 140 aa12.56□□□□□ -0.4
CCNDBP1-201ENST00000300213 LAMTOR2Q9Y2Q5 125 aa12.56□□□□□ -0.4
CCNDBP1-201ENST00000300213 MRPL54Q6P161 138 aaKnown RBP12.56□□□□□ -0.4
CCNDBP1-201ENST00000300213 ZNF114Q8NC26 417 aa12.56□□□□□ -0.4
CCNDBP1-201ENST00000300213 ZNF439Q8NDP4 499 aa12.56□□□□□ -0.4
CCNDBP1-201ENST00000300213 OR10G8Q8NGN5 311 aa12.56□□□□□ -0.4
CCNDBP1-201ENST00000300213 FSCN3Q9NQT6 498 aa12.56□□□□□ -0.4
CCNDBP1-201ENST00000300213 A0A0U1RQV5 110 aa12.56□□□□□ -0.4
CCNDBP1-201ENST00000300213 AQP7P3A6NL99 342 aa12.56□□□□□ -0.4
CCNDBP1-201ENST00000300213 TNFSF11O14788 317 aa12.56□□□□□ -0.4
CCNDBP1-201ENST00000300213 PAX1P15863 534 aa12.56□□□□□ -0.4
CCNDBP1-201ENST00000300213 UCP1P25874 307 aa12.56□□□□□ -0.4
CCNDBP1-201ENST00000300213 SRP14P37108 136 aaKnown RBP12.56□□□□□ -0.4
CCNDBP1-201ENST00000300213 CDC34P49427 236 aaPredicted RBP12.56□□□□□ -0.4
CCNDBP1-201ENST00000300213 LRRC75BQ2VPJ9 315 aa12.56□□□□□ -0.4
CCNDBP1-201ENST00000300213 TMEM211Q6ICI0 200 aa12.56□□□□□ -0.4
CCNDBP1-201ENST00000300213 LCN12Q6JVE5 192 aa12.56□□□□□ -0.4
CCNDBP1-201ENST00000300213 MBD3L1Q8WWY6 194 aa12.56□□□□□ -0.4
CCNDBP1-201ENST00000300213 CLDN23Q96B33 292 aa12.56□□□□□ -0.4
CCNDBP1-201ENST00000300213 TBL2Q9Y4P3 447 aaKnown RBP12.56□□□□□ -0.4
CCNDBP1-201ENST00000300213 KIR2DS1A0A191URI9 304 aa12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 CTXND1A0A1B0GTU2 59 aa12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 FRMD6-AS1P0C7T7 363 aa12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 CCL1P22362 96 aa12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 IGFBP4P22692 258 aa12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 KIR2DS4P43632 304 aa12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 KIR2DS1Q14954 304 aa12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 PLPPR5Q32ZL2 321 aa12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 VASH2Q86V25 355 aa12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 GPR35Q9HC97 309 aa12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 NBEAQ8NFP9 2946 aa12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 IL6RP08887 468 aaPredicted RBP12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 OTX1P32242 354 aaPredicted RBP12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 G6PCP35575 357 aa12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 FUT6P51993 359 aa12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 Q56UQ5 140 aa12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 OR1F12Q8NHA8 337 aa12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 WNT5BQ9H1J7 359 aa12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 DECR2Q9NUI1 292 aa12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 FER1L5A0AVI2 2057 aa12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 TRAV1-1A0A0B4J248 108 aa12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 ATP6V1FQ16864 119 aa12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 MAJINQ3KP22 176 aa12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 ABLIM2Q6H8Q1 611 aa12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 OR2M3Q8NG83 312 aa12.55□□□□□ -0.4
CCNDBP1-201ENST00000300213 PCDH15Q96QU1 1955 aa12.54□□□□□ -0.4
CCNDBP1-201ENST00000300213 SOX8P57073 446 aa12.54□□□□□ -0.4
CCNDBP1-201ENST00000300213 GAGE1Q13065 139 aa12.54□□□□□ -0.4
CCNDBP1-201ENST00000300213 PDLIM3Q53GG5 364 aaPredicted RBP12.54□□□□□ -0.4
CCNDBP1-201ENST00000300213 COA6Q5JTJ3 125 aaKnown RBP12.54□□□□□ -0.4
CCNDBP1-201ENST00000300213 OR8I2Q8N0Y5 310 aa12.54□□□□□ -0.4
CCNDBP1-201ENST00000300213 ZNF738Q8NE65 137 aa12.54□□□□□ -0.4
CCNDBP1-201ENST00000300213 TSTD1Q8NFU3 115 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms