RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 LDLRAD3Q86YD5 345 aa7.83□□□□□ -1.16
PRDM9-201ENST00000296682 FAM185AQ8N0U4 392 aa7.83□□□□□ -1.16
PRDM9-201ENST00000296682 LRTM2Q8N967 370 aa7.83□□□□□ -1.16
PRDM9-201ENST00000296682 DCAF16Q9NXF7 216 aa7.83□□□□□ -1.16
PRDM9-201ENST00000296682 MALRD1Q5VYJ5 2156 aa7.83□□□□□ -1.16
PRDM9-201ENST00000296682 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.83□□□□□ -1.16
PRDM9-201ENST00000296682 PRSS44E7EML9 344 aa7.83□□□□□ -1.16
PRDM9-201ENST00000296682 SYNGR2O43760 224 aa7.83□□□□□ -1.16
PRDM9-201ENST00000296682 FAM157CP0CG43 387 aa7.83□□□□□ -1.16
PRDM9-201ENST00000296682 DEFA4P12838 97 aa7.83□□□□□ -1.16
PRDM9-201ENST00000296682 CCL20P78556 96 aa7.83□□□□□ -1.16
PRDM9-201ENST00000296682 SOHLH1Q5JUK2 328 aa7.83□□□□□ -1.16
PRDM9-201ENST00000296682 ZNF474Q6S9Z5 364 aaPredicted RBP7.83□□□□□ -1.16
PRDM9-201ENST00000296682 Q8IYB0 196 aa7.83□□□□□ -1.16
PRDM9-201ENST00000296682 LILRB1Q8NHL6 650 aaPredicted RBP7.83□□□□□ -1.16
PRDM9-201ENST00000296682 NRIP2Q9BQI9 281 aa7.83□□□□□ -1.16
PRDM9-201ENST00000296682 CDS2O95674 445 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 GYPAP02724 150 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 S100A6P06703 90 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 PGA5P0DJD9 388 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 P2RY1P47900 373 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 NKX6-1P78426 367 aaPredicted RBP7.82□□□□□ -1.16
PRDM9-201ENST00000296682 TNFAIP6P98066 277 aaPredicted RBP7.82□□□□□ -1.16
PRDM9-201ENST00000296682 BAXQ07812 192 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 ZNF273Q14593 569 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 WDR82Q6UXN9 313 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 TGIF2LYQ8IUE0 185 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 LYG1Q8N1E2 194 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 PKIBQ9C010 78 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 HEYLQ9NQ87 328 aaPredicted RBP7.82□□□□□ -1.16
PRDM9-201ENST00000296682 FAM208BQ5VWN6 2430 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 C17orf98A8MV24 154 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 AQP7O14520 342 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 S1PR2O95136 353 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 EGR1P18146 543 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 RAB11AP62491 216 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 CATR1Q13166 79 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 PRAMEF5Q5TYX0 476 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 ZNF324BQ6AW86 544 aaPredicted RBP7.82□□□□□ -1.16
PRDM9-201ENST00000296682 Q6P435 159 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 LYPD6BQ8NI32 183 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 ZDHHC16Q969W1 377 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 SNRNP40Q96DI7 357 aaKnown RBP7.82□□□□□ -1.16
PRDM9-201ENST00000296682 HIPK2Q9H2X6 1198 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 DYNLRB1Q9NP97 96 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 PLA2G2EQ9NZK7 142 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 ZDHHC8Q9ULC8 765 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 FAM90A10PA6NDY2 464 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 FAM90A18PA6NE21 464 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 FAM90A16PA6NEW6 464 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 FAM90A20PA6NIJ5 464 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 FAM90A8PA6NJQ4 464 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 FAM90A7PA6NKC0 464 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 FAM90A27PA6NNH2 459 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 FAM90A22PA8MWA6 464 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 FAM90A12PA8MX19 464 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 FAM90A5PA8MXJ8 464 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 FAM90A23PA8MXZ1 464 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 IFNA4P05014 189 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 FAM90A15PP0C7V4 464 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 FAM90A13PP0C7W8 464 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 FAM90A14PP0C7W9 464 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 FAM90A24PP0C7X0 464 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 CEACAM1P13688 526 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 REG1BP48304 166 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 SULT1A2P50226 295 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 RPL39P5Q59GN2 51 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 DUX4L9Q6RFH8 374 aaPredicted RBP7.82□□□□□ -1.16
PRDM9-201ENST00000296682 ASCL5Q7RTU5 278 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 SAXO1Q8IYX7 474 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 PRSS33Q8NF86 280 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 TMEM171Q8WVE6 324 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 RND1Q92730 232 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 LIN7CQ9NUP9 197 aaKnown RBP7.82□□□□□ -1.16
PRDM9-201ENST00000296682 TUBD1Q9UJT1 453 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 WIPI2Q9Y4P8 454 aa7.82□□□□□ -1.16
PRDM9-201ENST00000296682 RELNP78509 3460 aa7.81□□□□□ -1.16
PRDM9-201ENST00000296682 TNFSF13O75888 250 aa7.81□□□□□ -1.16
PRDM9-201ENST00000296682 CLDN14O95500 239 aa7.81□□□□□ -1.16
PRDM9-201ENST00000296682 ADCYAP1P18509 176 aa7.81□□□□□ -1.16
PRDM9-201ENST00000296682 TUBG1P23258 451 aa7.81□□□□□ -1.16
PRDM9-201ENST00000296682 UCP3P55916 312 aa7.81□□□□□ -1.16
PRDM9-201ENST00000296682 RAB2AP61019 212 aa7.81□□□□□ -1.16
PRDM9-201ENST00000296682 RPL30P62888 115 aaKnown RBP7.81□□□□□ -1.16
PRDM9-201ENST00000296682 SP5Q6BEB4 398 aaPredicted RBP7.81□□□□□ -1.16
PRDM9-201ENST00000296682 C22orf34Q6ZV56 151 aa7.81□□□□□ -1.16
PRDM9-201ENST00000296682 ZNF709Q8N972 641 aa7.81□□□□□ -1.16
PRDM9-201ENST00000296682 PPP1R35Q8TAP8 253 aa7.81□□□□□ -1.16
PRDM9-201ENST00000296682 PBDC1Q9BVG4 233 aa7.81□□□□□ -1.16
PRDM9-201ENST00000296682 DKK4Q9UBT3 224 aa7.81□□□□□ -1.16
PRDM9-201ENST00000296682 COL12A1Q99715 3063 aa7.81□□□□□ -1.16
PRDM9-201ENST00000296682 ZZEF1O43149 2961 aa7.81□□□□□ -1.16
PRDM9-201ENST00000296682 PLXNB1O43157 2135 aa7.81□□□□□ -1.16
PRDM9-201ENST00000296682 ACP7Q6ZNF0 438 aa7.81□□□□□ -1.16
PRDM9-201ENST00000296682 H1FOOQ8IZA3 346 aaPredicted RBP7.81□□□□□ -1.16
PRDM9-201ENST00000296682 CLCC1Q96S66 551 aa7.81□□□□□ -1.16
PRDM9-201ENST00000296682 ARV1Q9H2C2 271 aa7.81□□□□□ -1.16
PRDM9-201ENST00000296682 ZNRD1Q9P1U0 126 aa7.81□□□□□ -1.16
PRDM9-201ENST00000296682 CRYABP02511 175 aaKnown RBP7.81□□□□□ -1.16
PRDM9-201ENST00000296682 UCP1P25874 307 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms