RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 RAB5AP20339 215 aa12.66□□□□□ -0.38
CCDC116-201ENST00000292779 AGAP20933 346 aa12.66□□□□□ -0.38
CCDC116-201ENST00000292779 HOXC12P31275 282 aa12.66□□□□□ -0.38
CCDC116-201ENST00000292779 AESQ08117 197 aa12.66□□□□□ -0.38
CCDC116-201ENST00000292779 ZNF506Q5JVG8 444 aa12.66□□□□□ -0.38
CCDC116-201ENST00000292779 FGFRL1Q8N441 504 aa12.66□□□□□ -0.38
CCDC116-201ENST00000292779 ZNF525Q8N782 197 aa12.66□□□□□ -0.38
CCDC116-201ENST00000292779 SCGB1C1Q8TD33 95 aa12.66□□□□□ -0.38
CCDC116-201ENST00000292779 GALMQ96C23 342 aa12.66□□□□□ -0.38
CCDC116-201ENST00000292779 RBMXL1Q96E39 390 aaKnown RBP12.66□□□□□ -0.38
CCDC116-201ENST00000292779 HIPK2Q9H2X6 1198 aa12.66□□□□□ -0.38
CCDC116-201ENST00000292779 FZR1Q9UM11 496 aa12.66□□□□□ -0.38
CCDC116-201ENST00000292779 CHD3Q12873 2000 aaKnown RBP12.66□□□□□ -0.38
CCDC116-201ENST00000292779 INTS1Q8N201 2190 aaKnown RBP12.66□□□□□ -0.38
CCDC116-201ENST00000292779 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.65□□□□□ -0.38
CCDC116-201ENST00000292779 C1QTNF9BB2RNN3 333 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 H3BQ15 152 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 AQP7O14520 342 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 KLK10O43240 276 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 HBE1P02100 147 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 IFNA4P05014 189 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 RAB2AP61019 212 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 RPS23P62266 143 aaKnown RBP12.65□□□□□ -0.38
CCDC116-201ENST00000292779 FOXF2Q12947 444 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 ZNF561Q8N587 486 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 ZNF645Q8N7E2 425 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 CYB561D1Q8N8Q1 229 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 OR52L2PQ8NGH6 319 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 C12orf57Q99622 126 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 OR2D2Q9H210 308 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 UNKLQ9H9P5 680 aaKnown RBP12.65□□□□□ -0.38
CCDC116-201ENST00000292779 PTPRQQ9UMZ3 2332 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 HEATR1Q9H583 2144 aaKnown RBP12.65□□□□□ -0.38
CCDC116-201ENST00000292779 TRAV17A0A0B4J275 112 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 RNF212BA8MTL3 300 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 RAMP3O60896 148 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 HSPB1P04792 205 aaKnown RBP12.65□□□□□ -0.38
CCDC116-201ENST00000292779 COX5AP20674 150 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 PRAMEF6Q5VXH4 476 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 Q6ZR03 302 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 C5orf30Q96GV9 206 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 CXXC4Q9H2H0 198 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 VSIRQ9H7M9 311 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 RPRMQ9NS64 109 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 NBEAQ8NFP9 2946 aa12.65□□□□□ -0.38
CCDC116-201ENST00000292779 HOXB1P14653 301 aaPredicted RBP12.64□□□□□ -0.39
CCDC116-201ENST00000292779 IL2RGP31785 369 aa12.64□□□□□ -0.39
CCDC116-201ENST00000292779 OR2B11Q5JQS5 317 aa12.64□□□□□ -0.39
CCDC116-201ENST00000292779 SPANXN5Q5MJ07 72 aa12.64□□□□□ -0.39
CCDC116-201ENST00000292779 SLC35E4Q6ICL7 350 aa12.64□□□□□ -0.39
CCDC116-201ENST00000292779 ACP7Q6ZNF0 438 aa12.64□□□□□ -0.39
CCDC116-201ENST00000292779 IQCF2Q8IXL9 164 aa12.64□□□□□ -0.39
CCDC116-201ENST00000292779 RAB39BQ96DA2 213 aa12.64□□□□□ -0.39
CCDC116-201ENST00000292779 COQ2Q96H96 371 aa12.64□□□□□ -0.39
CCDC116-201ENST00000292779 UFSP2Q9NUQ7 469 aa12.64□□□□□ -0.39
CCDC116-201ENST00000292779 MMP24Q9Y5R2 645 aa12.64□□□□□ -0.39
CCDC116-201ENST00000292779 TRAV1-1A0A0B4J248 108 aa12.64□□□□□ -0.39
CCDC116-201ENST00000292779 A0A1W2PPE3 182 aa12.64□□□□□ -0.39
CCDC116-201ENST00000292779 OOEPA6NGQ2 149 aa12.64□□□□□ -0.39
CCDC116-201ENST00000292779 TIMM8AO60220 97 aaPredicted RBP12.64□□□□□ -0.39
CCDC116-201ENST00000292779 OR2C1O95371 312 aa12.64□□□□□ -0.39
CCDC116-201ENST00000292779 HBZP02008 142 aa12.64□□□□□ -0.39
CCDC116-201ENST00000292779 FABP6P51161 128 aa12.64□□□□□ -0.39
CCDC116-201ENST00000292779 RPL30P62888 115 aaKnown RBP12.64□□□□□ -0.39
CCDC116-201ENST00000292779 HBG1P69891 147 aa12.64□□□□□ -0.39
CCDC116-201ENST00000292779 HBG2P69892 147 aa12.64□□□□□ -0.39
CCDC116-201ENST00000292779 EIF2S3LQ2VIR3 472 aaKnown RBP12.64□□□□□ -0.39
CCDC116-201ENST00000292779 ZNF429Q86V71 674 aa12.64□□□□□ -0.39
CCDC116-201ENST00000292779 LILRB2Q8N423 598 aa12.64□□□□□ -0.39
CCDC116-201ENST00000292779 ZNF808Q8N4W9 903 aaPredicted RBP12.64□□□□□ -0.39
CCDC116-201ENST00000292779 MSL2Q9HCI7 577 aa12.64□□□□□ -0.39
CCDC116-201ENST00000292779 C5orf52A6NGY3 159 aa12.63□□□□□ -0.39
CCDC116-201ENST00000292779 CECR9P0C854 216 aa12.63□□□□□ -0.39
CCDC116-201ENST00000292779 UBE2KP61086 200 aa12.63□□□□□ -0.39
CCDC116-201ENST00000292779 ADAM5Q6NVV9 412 aa12.63□□□□□ -0.39
CCDC116-201ENST00000292779 WDR82Q6UXN9 313 aa12.63□□□□□ -0.39
CCDC116-201ENST00000292779 MRGPRDQ8TDS7 321 aa12.63□□□□□ -0.39
CCDC116-201ENST00000292779 SARAFQ96BY9 339 aa12.63□□□□□ -0.39
CCDC116-201ENST00000292779 GNG13Q9P2W3 67 aa12.63□□□□□ -0.39
CCDC116-201ENST00000292779 DOCK11Q5JSL3 2073 aa12.63□□□□□ -0.39
CCDC116-201ENST00000292779 MAP1BP46821 2468 aaKnown RBP12.63□□□□□ -0.39
CCDC116-201ENST00000292779 CACNA1AO00555 2505 aa12.63□□□□□ -0.39
CCDC116-201ENST00000292779 EIF3GO75821 320 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCDC116-201ENST00000292779 PTBP3O95758 552 aaKnown RBP12.63□□□□□ -0.39
CCDC116-201ENST00000292779 KRASP01116 189 aa12.63□□□□□ -0.39
CCDC116-201ENST00000292779 S100A6P06703 90 aa12.63□□□□□ -0.39
CCDC116-201ENST00000292779 G6PCP35575 357 aa12.63□□□□□ -0.39
CCDC116-201ENST00000292779 GABRA2P47869 451 aa12.63□□□□□ -0.39
CCDC116-201ENST00000292779 ZNF816Q0VGE8 651 aaPredicted RBP12.63□□□□□ -0.39
CCDC116-201ENST00000292779 ZNF726P1Q15940 193 aa12.63□□□□□ -0.39
CCDC116-201ENST00000292779 LRRC75BQ2VPJ9 315 aa12.63□□□□□ -0.39
CCDC116-201ENST00000292779 KHDC3LQ587J8 217 aa12.63□□□□□ -0.39
CCDC116-201ENST00000292779 C1orf162Q8NEQ5 155 aaPredicted RBP12.63□□□□□ -0.39
CCDC116-201ENST00000292779 YPEL4Q96NS1 127 aa12.63□□□□□ -0.39
CCDC116-201ENST00000292779 PSMG3Q9BT73 122 aaPredicted RBP12.63□□□□□ -0.39
CCDC116-201ENST00000292779 RBKSQ9H477 322 aa12.63□□□□□ -0.39
CCDC116-201ENST00000292779 METRNQ9UJH8 293 aa12.63□□□□□ -0.39
CCDC116-201ENST00000292779 SVILO95425 2214 aa12.62□□□□□ -0.39
CCDC116-201ENST00000292779 LOC102723971A0A1B0GUV8 181 aa12.62□□□□□ -0.39
CCDC116-201ENST00000292779 ZNF727A8MUV8 499 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms