RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 C5orf52A6NGY3 159 aa9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 TRDCB7Z8K6 153 aa9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 UNQ9370/PRO34162Q6UXP9 181 aa9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 OR10V1Q8NGI7 309 aa9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 FLVCR1-AS1Q8TAF5 88 aa9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 CCL28Q9NRJ3 127 aa9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 TECRQ9NZ01 308 aaKnown RBP9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 STARD10Q9Y365 291 aa9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 TRAV14DV4A0A0A6YYC5 116 aa9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 MAP1LC3CQ9BXW4 147 aa9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 COMMD5Q9GZQ3 224 aa9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 MS4A5Q9H3V2 200 aa9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 PDE6DO43924 150 aa9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 NEURL1O76050 574 aa9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 SRP14P37108 136 aaKnown RBP9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 CEACAM6P40199 344 aa9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 CRYBA2P53672 197 aa9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 ASB10Q8WXI3 467 aa9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 REG4Q9BYZ8 158 aa9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 MYOZ1Q9NP98 299 aaPredicted RBP9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 A0A0J9YW62 118 aa9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 PPIHO43447 177 aaKnown RBP9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 ZNF32P17041 273 aa9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 SLC35B1P78383 322 aa9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 NR2C2APQ86WQ0 139 aa9.83□□□□□ -0.84
NPC1L1-201ENST00000289547 RPS4Y1P22090 263 aaKnown RBP9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 CSN1S1P47710 185 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 COMPP49747 757 aaPredicted RBP9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 GNB2P62879 340 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 SMIM21Q3B7S5 101 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 BLNKQ8WV28 456 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 TUBA4BQ9H853 241 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 GPR35Q9HC97 309 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 A0A1W2PP11 408 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 HPRT1P00492 218 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 TMEM50BP56557 158 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 ERHP84090 104 aaKnown RBP9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 Q5PR19 223 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 SIGLEC12Q96PQ1 595 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 DLL3Q9NYJ7 618 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 TAAR3PQ9P1P4 343 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 GRIFINA4D1Z8 144 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 IGKV1D-16P01601 117 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 UQCRFS1P47985 274 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 PRSS53Q2L4Q9 553 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 LRRC75AQ8NAA5 344 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 SCCPDHQ8NBX0 429 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 OR2Z1Q8NG97 314 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 EDARADDQ8WWZ3 215 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 C5orf66Q9H5L9 145 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 GP6Q9HCN6 339 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 K7ENP7 123 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 APCSP02743 223 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 GPX4P36969 197 aaPredicted RBP9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 SERF2P84101 59 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 TNFRSF9Q07011 255 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 Q1RN00 199 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 LRRC10Q5BKY1 277 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 C12orf54Q6X4T0 127 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 WDFY1Q8IWB7 410 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 OR1K1Q8NGR3 316 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 ZDHHC16Q969W1 377 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 PARLQ9H300 379 aa9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 ZNF703Q9H7S9 590 aaPredicted RBP9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 EP300Q09472 2414 aaPredicted RBP9.82□□□□□ -0.84
NPC1L1-201ENST00000289547 LOC390937A0A1W2PQ73 354 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 DXOO77932 396 aaKnown RBP9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 TDGF1P13385 188 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 ERVFRD-1P60508 538 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 TNFAIP6P98066 277 aaPredicted RBP9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 TEX29Q8N6K0 151 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 OR4C12Q96R67 309 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 NYNRINQ9P2P1 1898 aaKnown RBP9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 COLCA2A8K830 154 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 UPK3AO75631 287 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 ADRA2AP08913 450 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 ZNF708P17019 499 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 RPL13AP40429 203 aaKnown RBP9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 LSM6P62312 80 aaKnown RBP9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 TMEM97Q5BJF2 176 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 ST6GALNAC3Q8NDV1 305 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 DEFB108BQ8NET1 73 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 AMELYQ99218 206 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 NDUFB3O43676 98 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 KLF7O75840 302 aaPredicted RBP9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 OR2J3O76001 311 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 NDUFB4O95168 129 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 SNRPCP09234 159 aaKnown RBP9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 FAM157CP0CG43 387 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 SPATA46Q5T0L3 261 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 ATOH7Q8N100 152 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 MRGPRFQ96AM1 343 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 UCN2Q96RP3 112 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 SLC2A8Q9NY64 477 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 MEX3AA1L020 520 aaKnown RBP9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 DEFA4P12838 97 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 PMCHL1Q16048 86 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 ZNF658BQ4V348 819 aaPredicted RBP9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 HIKESHIQ53FT3 197 aa9.81□□□□□ -0.84
NPC1L1-201ENST00000289547 BMPERQ8N8U9 685 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms