RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 NAT8Q9UHE5 227 aa11.19□□□□□ -0.62
SLC28A1-201ENST00000286749 IGHV3-64DA0A0J9YX35 117 aa11.18□□□□□ -0.62
SLC28A1-201ENST00000286749 CLDN1O95832 211 aa11.18□□□□□ -0.62
SLC28A1-201ENST00000286749 HLA-CQ95604 372 aa11.18□□□□□ -0.62
SLC28A1-201ENST00000286749 RPUSD4Q96CM3 377 aaKnown RBP11.18□□□□□ -0.62
SLC28A1-201ENST00000286749 C14orf144Q96I85 54 aa11.18□□□□□ -0.62
SLC28A1-201ENST00000286749 PRO1933Q9H354 126 aa11.18□□□□□ -0.62
SLC28A1-201ENST00000286749 PRSS50Q9UI38 385 aa11.18□□□□□ -0.62
SLC28A1-201ENST00000286749 GTF3C1Q12789 2109 aa11.18□□□□□ -0.62
SLC28A1-201ENST00000286749 B4E171 279 aa11.18□□□□□ -0.62
SLC28A1-201ENST00000286749 MT-CO3P00414 261 aa11.18□□□□□ -0.62
SLC28A1-201ENST00000286749 TSPAN7P41732 249 aa11.18□□□□□ -0.62
SLC28A1-201ENST00000286749 ACSM6Q6P461 480 aa11.18□□□□□ -0.62
SLC28A1-201ENST00000286749 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.18□□□□□ -0.62
SLC28A1-201ENST00000286749 WDR86Q86TI4 376 aa11.18□□□□□ -0.62
SLC28A1-201ENST00000286749 VASH2Q86V25 355 aa11.18□□□□□ -0.62
SLC28A1-201ENST00000286749 FGFRL1Q8N441 504 aa11.18□□□□□ -0.62
SLC28A1-201ENST00000286749 PARD6GQ9BYG4 376 aaPredicted RBP11.18□□□□□ -0.62
SLC28A1-201ENST00000286749 STRADBQ9C0K7 418 aa11.18□□□□□ -0.62
SLC28A1-201ENST00000286749 C12orf49Q9H741 205 aa11.18□□□□□ -0.62
SLC28A1-201ENST00000286749 SLC25A22Q9H936 323 aa11.18□□□□□ -0.62
SLC28A1-201ENST00000286749 GAB2Q9UQC2 676 aa11.18□□□□□ -0.62
SLC28A1-201ENST00000286749 USF3Q68DE3 2245 aa11.17□□□□□ -0.62
SLC28A1-201ENST00000286749 SMCO3A2RU48 225 aa11.17□□□□□ -0.62
SLC28A1-201ENST00000286749 TUBG1P23258 451 aa11.17□□□□□ -0.62
SLC28A1-201ENST00000286749 ZXDAP98168 799 aa11.17□□□□□ -0.62
SLC28A1-201ENST00000286749 TMEM241Q24JQ0 296 aa11.17□□□□□ -0.62
SLC28A1-201ENST00000286749 CYP2G1PQ6ZSU1 146 aa11.17□□□□□ -0.62
SLC28A1-201ENST00000286749 TTTY12Q9BZ98 90 aa11.17□□□□□ -0.62
SLC28A1-201ENST00000286749 RYDENQ9NUL5 291 aaKnown RBP11.17□□□□□ -0.62
SLC28A1-201ENST00000286749 UFSP2Q9NUQ7 469 aa11.17□□□□□ -0.62
SLC28A1-201ENST00000286749 PITPNC1Q9UKF7 332 aa11.17□□□□□ -0.62
SLC28A1-201ENST00000286749 LOXL2Q9Y4K0 774 aa11.17□□□□□ -0.62
SLC28A1-201ENST00000286749 COL27A1Q8IZC6 1860 aaPredicted RBP11.17□□□□□ -0.62
SLC28A1-201ENST00000286749 FRYQ5TBA9 3013 aa11.17□□□□□ -0.62
SLC28A1-201ENST00000286749 TNFRSF9Q07011 255 aa11.17□□□□□ -0.62
SLC28A1-201ENST00000286749 TMEM14EPQ6UXP3 125 aa11.17□□□□□ -0.62
SLC28A1-201ENST00000286749 GATAD1Q8WUU5 269 aa11.17□□□□□ -0.62
SLC28A1-201ENST00000286749 AGMATQ9BSE5 352 aa11.17□□□□□ -0.62
SLC28A1-201ENST00000286749 CELSR3Q9NYQ7 3312 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 RAMP3O60896 148 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 KBTBD11O94819 623 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 CER1O95813 267 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 IL2RGP31785 369 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 COL10A1Q03692 680 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 BSXQ3C1V8 233 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 DNLZQ5SXM8 178 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 UNQ6494/PRO21346Q6UXR6 183 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 SCCPDHQ8NBX0 429 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 RTL8AQ9BWD3 113 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 SRD5A3Q9H8P0 318 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 PLA2G3Q9NZ20 509 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 LAMP3Q9UQV4 416 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 AHCTF1Q8WYP5 2266 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 PFN1P07737 140 aaKnown RBP11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 ERVS71-1P61550 626 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 PKIAP61925 76 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 RPL23P62829 140 aaKnown RBP11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 ABHD17BQ5VST6 288 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 MDP1Q86V88 176 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 MCEMP1Q8IX19 187 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 TMEM183AQ8IXX5 376 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 GPR87Q9BY21 358 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 CLN8Q9UBY8 286 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 TIMM9Q9Y5J7 89 aa11.16□□□□□ -0.62
SLC28A1-201ENST00000286749 FAM90A26D6RGX4 464 aa11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 KRASP01116 189 aa11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 DDTP30046 118 aa11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 G6PCP35575 357 aa11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 PSMB3P49720 205 aa11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 RPS16P62249 146 aaKnown RBP11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 RTP5Q14D33 572 aa11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 OR1C1Q15619 314 aa11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 CLEC12BQ2HXU8 276 aa11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 FAM53AQ6NSI3 398 aaPredicted RBP11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 TMEM251Q8N6I4 163 aa11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 TMEM105Q8N8V8 129 aa11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 RNF212BA8MTL3 300 aa11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 NXPH2O95156 264 aa11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 IL18BPO95998 194 aa11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 GZMHP20718 246 aa11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 GALR1P47211 349 aa11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 CEBPDP49716 269 aaPredicted RBP11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 PLGLB1Q02325 96 aa11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 ZNF816Q0VGE8 651 aaPredicted RBP11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 PMS2P11Q13670 270 aa11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 OR4F5Q8NH21 305 aa11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 OR4F4Q96R69 305 aa11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 ELOVL1Q9BW60 279 aa11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 PARLQ9H300 379 aa11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 SMOC1Q9H4F8 434 aa11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 MBNL3Q9NUK0 354 aaKnown RBP11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 HSPB7Q9UBY9 170 aa11.15□□□□□ -0.62
SLC28A1-201ENST00000286749 MED13Q9UHV7 2174 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 TSTD3H0UI37 97 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 H7BYZ3 331 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 CDIPTO14735 213 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 HOXA6P31267 233 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 ERVK11-1P61568 191 aa11.14□□□□□ -0.63
SLC28A1-201ENST00000286749 LINC00696Q6ZRV3 163 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms