RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 IGKV3-11P04433 115 aa10.96□□□□□ -0.66
HERC6-202ENST00000273960 IER3P46695 156 aa10.96□□□□□ -0.66
HERC6-202ENST00000273960 ATP5G3P48201 142 aa10.96□□□□□ -0.66
HERC6-202ENST00000273960 SUMO1P63165 101 aaKnown RBP10.96□□□□□ -0.66
HERC6-202ENST00000273960 ID3Q02535 119 aa10.96□□□□□ -0.66
HERC6-202ENST00000273960 C9orf135Q5VTT2 229 aa10.96□□□□□ -0.66
HERC6-202ENST00000273960 LYG1Q8N1E2 194 aa10.96□□□□□ -0.66
HERC6-202ENST00000273960 LRTM2Q8N967 370 aa10.96□□□□□ -0.66
HERC6-202ENST00000273960 ALKBH7Q9BT30 221 aaPredicted RBP10.96□□□□□ -0.66
HERC6-202ENST00000273960 IGHV1OR21-1A0A087WYE8 117 aa10.95□□□□□ -0.66
HERC6-202ENST00000273960 TRBV11-1A0A0K0K1C0 115 aa10.95□□□□□ -0.66
HERC6-202ENST00000273960 C11orf94C9JXX5 98 aa10.95□□□□□ -0.66
HERC6-202ENST00000273960 WDR1O75083 606 aa10.95□□□□□ -0.66
HERC6-202ENST00000273960 TCN2P20062 427 aa10.95□□□□□ -0.66
HERC6-202ENST00000273960 ZNF90Q03938 601 aa10.95□□□□□ -0.66
HERC6-202ENST00000273960 MSMO1Q15800 293 aa10.95□□□□□ -0.66
HERC6-202ENST00000273960 COA6Q5JTJ3 125 aaKnown RBP10.95□□□□□ -0.66
HERC6-202ENST00000273960 FBXW9Q5XUX1 488 aa10.95□□□□□ -0.66
HERC6-202ENST00000273960 ACSM6Q6P461 480 aa10.95□□□□□ -0.66
HERC6-202ENST00000273960 GUSBP11Q6P575 273 aa10.95□□□□□ -0.66
HERC6-202ENST00000273960 OR8G5Q8NG78 346 aa10.95□□□□□ -0.66
HERC6-202ENST00000273960 STARD4Q96DR4 205 aa10.95□□□□□ -0.66
HERC6-202ENST00000273960 TECTBQ96PL2 329 aa10.95□□□□□ -0.66
HERC6-202ENST00000273960 COLQQ9Y215 455 aaPredicted RBP10.95□□□□□ -0.66
HERC6-202ENST00000273960 DUXBA0A1W2PPF3 345 aa10.95□□□□□ -0.66
HERC6-202ENST00000273960 NDUFB8O95169 186 aa10.95□□□□□ -0.66
HERC6-202ENST00000273960 TCL1AP56279 114 aa10.95□□□□□ -0.66
HERC6-202ENST00000273960 TPTE2P1Q5T6R2 138 aa10.95□□□□□ -0.66
HERC6-202ENST00000273960 SLC25A45Q8N413 288 aa10.95□□□□□ -0.66
HERC6-202ENST00000273960 OR10G4Q8NGN3 311 aa10.95□□□□□ -0.66
HERC6-202ENST00000273960 OR10G9Q8NGN4 311 aa10.95□□□□□ -0.66
HERC6-202ENST00000273960 OR10G7Q8NGN6 311 aa10.95□□□□□ -0.66
HERC6-202ENST00000273960 UCN2Q96RP3 112 aa10.95□□□□□ -0.66
HERC6-202ENST00000273960 MRPL13Q9BYD1 178 aaKnown RBP10.95□□□□□ -0.66
HERC6-202ENST00000273960 SLC22A20A6NK97 555 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 PATE3B3GLJ2 98 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 TRAF3IP2O43734 574 aaPredicted RBP10.94□□□□□ -0.66
HERC6-202ENST00000273960 NRASP01111 189 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 FASLGP48023 281 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 AMTP48728 403 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 GRB2P62993 217 aaKnown RBP10.94□□□□□ -0.66
HERC6-202ENST00000273960 LCN12Q6JVE5 192 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 HAPLN4Q86UW8 402 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 CISD2Q8N5K1 135 aaKnown RBP10.94□□□□□ -0.66
HERC6-202ENST00000273960 ZNF525Q8N782 197 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 SIGLECL1Q8N7X8 197 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 ZNF488Q96MN9 340 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 C11orf1Q9H5F2 150 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 KIAA1549Q9HCM3 1950 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 DOCK10Q96BY6 2186 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 TRAV38-1A0A0B4J264 116 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 FCN1O00602 326 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 NXPH1P58417 271 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 WDR5BQ86VZ2 330 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 TGIF2LYQ8IUE0 185 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 OR5P3Q8WZ94 311 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 PARD6GQ9BYG4 376 aaPredicted RBP10.94□□□□□ -0.66
HERC6-202ENST00000273960 NPIPA2E9PIF3 369 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 SYNGR2O43760 224 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 TUSC2O75896 110 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 NPPCP23582 126 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 SLC38A11Q08AI6 406 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 NMSQ5H8A3 153 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 IFI44Q8TCB0 444 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 PP6455Q8WZ26 134 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 ALKBH4Q9NXW9 302 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 FBXL7Q9UJT9 491 aa10.94□□□□□ -0.66
HERC6-202ENST00000273960 TIMM8BQ9Y5J9 83 aaPredicted RBP10.94□□□□□ -0.66
HERC6-202ENST00000273960 CLEC18AA5D8T8 446 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 PDCD6O75340 191 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 CCL2P13500 99 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 KITLGP21583 273 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 DUSP3P51452 185 aaPredicted RBP10.93□□□□□ -0.66
HERC6-202ENST00000273960 RSPO1Q2MKA7 263 aaPredicted RBP10.93□□□□□ -0.66
HERC6-202ENST00000273960 LYSMD4Q5XG99 296 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 KMT5CQ86Y97 462 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 CLEC18CQ8NCF0 446 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 GJC3Q8NFK1 279 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 DECR2Q9NUI1 292 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 MSR1P21757 451 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 PDLIM4P50479 330 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 TFF3Q07654 80 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 OR10G3Q8NGC4 313 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 OR5L2Q8NGL0 311 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 SSC4DQ8WTU2 575 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 WDYHV1Q96HA8 205 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 PYGO2Q9BRQ0 406 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 TCFL5Q9UL49 500 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 RNF115Q9Y4L5 304 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 SCRG1O75711 98 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 SRPXP78539 464 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 ZNF295-AS1Q8N0V1 137 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 ZNF611Q8N823 705 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 TAF15Q92804 592 aaKnown RBP eCLIP10.93□□□□□ -0.66
HERC6-202ENST00000273960 CLN8Q9UBY8 286 aa10.93□□□□□ -0.66
HERC6-202ENST00000273960 MDFIC2A0A1B0GVS7 189 aa10.92□□□□□ -0.66
HERC6-202ENST00000273960 PGLYRP1O75594 196 aaPredicted RBP10.92□□□□□ -0.66
HERC6-202ENST00000273960 B4GALT1P15291 398 aa10.92□□□□□ -0.66
HERC6-202ENST00000273960 EDDM3BP56851 147 aa10.92□□□□□ -0.66
HERC6-202ENST00000273960 C17orf67Q0P5P2 114 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms