RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 ZMAT5Q9UDW3 170 aaKnown RBP6.89□□□□□ -1.31
TPM3-201ENST00000271850 SMAD5-AS1Q9Y6J3 95 aa6.89□□□□□ -1.31
TPM3-201ENST00000271850 FAM90A7PA6NKC0 464 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 FAM90A23PA8MXZ1 464 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 OVOL1O14753 267 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 YPEL1O60688 119 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 PDCD6O75340 191 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 LY86O95711 162 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 CT45A6P0DMU7 189 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 CT45A5P0DMU8 189 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 CT45A7P0DMV0 189 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 OR5H8P0DN80 308 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 GP9P14770 177 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 FUT3P21217 361 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 INSL3P51460 131 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 LINC00205P59089 165 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 HTD2P86397 168 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 UNC119Q13432 240 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 ECSCRQ19T08 205 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 LRRC36Q1X8D7 754 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 TMEM30BQ3MIR4 351 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 RPL39P5Q59GN2 51 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 LY6G6FQ5SQ64 297 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 FAM27D1Q5T7N8 215 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 ACSM6Q6P461 480 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 ZNF880Q6PDB4 577 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 FAM131AQ6UXB0 335 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 GLDNQ6ZMI3 551 aaPredicted RBP6.88□□□□□ -1.31
TPM3-201ENST00000271850 Q8N1Y9 231 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 STX19Q8N4C7 294 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 ARPC1AQ92747 370 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 MRPS24Q96EL2 167 aaKnown RBP6.88□□□□□ -1.31
TPM3-201ENST00000271850 YPEL2Q96QA6 119 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 MYCBPQ99417 103 aaPredicted RBP6.88□□□□□ -1.31
TPM3-201ENST00000271850 CHCHD6Q9BRQ6 235 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 NICN1Q9BSH3 213 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 FAM103A1Q9BTL3 118 aaKnown RBP6.88□□□□□ -1.31
TPM3-201ENST00000271850 FBXL15Q9H469 300 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 SPACA1Q9HBV2 294 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 PAK1IP1Q9NWT1 392 aaPredicted RBP6.88□□□□□ -1.31
TPM3-201ENST00000271850 SMPD3Q9NY59 655 aaPredicted RBP6.88□□□□□ -1.31
TPM3-201ENST00000271850 JPT1Q9UK76 154 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 EXOSC1Q9Y3B2 195 aaKnown RBP6.88□□□□□ -1.31
TPM3-201ENST00000271850 NUBP2Q9Y5Y2 271 aa6.88□□□□□ -1.31
TPM3-201ENST00000271850 A0A1W2PN81 502 aa6.87□□□□□ -1.31
TPM3-201ENST00000271850 LINC01619G3V211 115 aa6.87□□□□□ -1.31
TPM3-201ENST00000271850 H0YJW9 148 aa6.87□□□□□ -1.31
TPM3-201ENST00000271850 SAP30O75446 220 aa6.87□□□□□ -1.31
TPM3-201ENST00000271850 CA11O75493 328 aa6.87□□□□□ -1.31
TPM3-201ENST00000271850 CRTAPO75718 401 aaPredicted RBP6.87□□□□□ -1.31
TPM3-201ENST00000271850 NAPSAO96009 420 aa6.87□□□□□ -1.31
TPM3-201ENST00000271850 LGALS1P09382 135 aaKnown RBP6.87□□□□□ -1.31
TPM3-201ENST00000271850 GNAO1P09471 354 aa6.87□□□□□ -1.31
TPM3-201ENST00000271850 CHRNA7P36544 502 aa6.87□□□□□ -1.31
TPM3-201ENST00000271850 CX3CL1P78423 397 aa6.87□□□□□ -1.31
TPM3-201ENST00000271850 QRFPP83859 136 aa6.87□□□□□ -1.31
TPM3-201ENST00000271850 GPR176Q14439 515 aa6.87□□□□□ -1.31
TPM3-201ENST00000271850 TMPRSS11AQ6ZMR5 421 aa6.87□□□□□ -1.31
TPM3-201ENST00000271850 C6orf201Q7Z4U5 140 aa6.87□□□□□ -1.31
TPM3-201ENST00000271850 LRRTM1Q86UE6 522 aa6.87□□□□□ -1.31
TPM3-201ENST00000271850 ZNF429Q86V71 674 aa6.87□□□□□ -1.31
TPM3-201ENST00000271850 TMEM80Q96HE8 168 aa6.87□□□□□ -1.31
TPM3-201ENST00000271850 S100A13Q99584 98 aa6.87□□□□□ -1.31
TPM3-201ENST00000271850 TM2D3Q9BRN9 247 aa6.87□□□□□ -1.31
TPM3-201ENST00000271850 AGMATQ9BSE5 352 aa6.87□□□□□ -1.31
TPM3-201ENST00000271850 EDA2RQ9HAV5 297 aa6.87□□□□□ -1.31
TPM3-201ENST00000271850 ALMS1Q8TCU4 4167 aa6.86□□□□□ -1.31
TPM3-201ENST00000271850 FOXI3A8MTJ6 420 aaPredicted RBP6.86□□□□□ -1.31
TPM3-201ENST00000271850 RRHO14718 337 aa6.86□□□□□ -1.31
TPM3-201ENST00000271850 IGHV3-11P01762 117 aa6.86□□□□□ -1.31
TPM3-201ENST00000271850 GLAP06280 429 aa6.86□□□□□ -1.31
TPM3-201ENST00000271850 CD37P11049 281 aa6.86□□□□□ -1.31
TPM3-201ENST00000271850 HTR2CP28335 458 aa6.86□□□□□ -1.31
TPM3-201ENST00000271850 CAPGP40121 348 aa6.86□□□□□ -1.31
TPM3-201ENST00000271850 ST3GAL4Q11206 333 aa6.86□□□□□ -1.31
TPM3-201ENST00000271850 LIN54Q6MZP7 749 aa6.86□□□□□ -1.31
TPM3-201ENST00000271850 TRAT1Q6PIZ9 186 aa6.86□□□□□ -1.31
TPM3-201ENST00000271850 ZNF554Q86TJ5 538 aa6.86□□□□□ -1.31
TPM3-201ENST00000271850 CDH26Q8IXH8 852 aa6.86□□□□□ -1.31
TPM3-201ENST00000271850 FBLIM1Q8WUP2 373 aa6.86□□□□□ -1.31
TPM3-201ENST00000271850 ABHD14BQ96IU4 210 aa6.86□□□□□ -1.31
TPM3-201ENST00000271850 RHOVQ96L33 236 aa6.86□□□□□ -1.31
TPM3-201ENST00000271850 GFI1Q99684 422 aa6.86□□□□□ -1.31
TPM3-201ENST00000271850 HDHD3Q9BSH5 251 aaPredicted RBP6.86□□□□□ -1.31
TPM3-201ENST00000271850 FAAP24Q9BTP7 215 aa6.86□□□□□ -1.31
TPM3-201ENST00000271850 C19orf73Q9NVV2 129 aa6.86□□□□□ -1.31
TPM3-201ENST00000271850 OR1A1Q9P1Q5 309 aa6.86□□□□□ -1.31
TPM3-201ENST00000271850 A3GALT2U3KPV4 340 aa6.86□□□□□ -1.31
TPM3-201ENST00000271850 IGKV1-6A0A0C4DH72 117 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 LCE6AA0A183 80 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 TMEM14DPA8MWL7 114 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 ARPC1BO15143 372 aaKnown RBP6.85□□□□□ -1.31
TPM3-201ENST00000271850 RBMXL2O75526 392 aaKnown RBP6.85□□□□□ -1.31
TPM3-201ENST00000271850 IGKV1-16P04430 117 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 CD1AP06126 327 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 IGHV4-30-4P0DP06 118 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 MYL12AP19105 171 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 CELP19835 753 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 RPS27AP62979 156 aaKnown RBP6.85□□□□□ -1.31
TPM3-201ENST00000271850 DEFA5Q01523 94 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms