RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 ADAT3Q96EY9 351 aaPredicted RBP6.79□□□□□ -1.32
USP3-201ENST00000268049 ZNF430Q9H8G1 570 aaPredicted RBP6.79□□□□□ -1.32
USP3-201ENST00000268049 PLAC1Q9HBJ0 212 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 SLC25A37Q9NYZ2 338 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 KLF2Q9Y5W3 355 aaPredicted RBP6.79□□□□□ -1.32
USP3-201ENST00000268049 DOCK6Q96HP0 2047 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 GVINP1Q7Z2Y8 2422 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 A0A1B0GTL3 188 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 H3BP45 60 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 CDS2O95674 445 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 TSPOP30536 169 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 CALHM1Q8IU99 346 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 GCSAMQ8N6F7 178 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 PRR14Q9BWN1 585 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 OOEPA6NGQ2 149 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 HMGN4O00479 90 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 SIGLEC5O15389 551 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 PLA2G10O15496 165 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 DUS4LO95620 317 aaKnown RBP6.79□□□□□ -1.32
USP3-201ENST00000268049 STAG3L3P0CL85 134 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 EMP1P54849 157 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 CALHM3Q86XJ0 350 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 NKAIN4Q8IVV8 208 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 OR5C1Q8NGR4 320 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 FAM131CQ96AQ9 280 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 MRPL13Q9BYD1 178 aaKnown RBP6.79□□□□□ -1.32
USP3-201ENST00000268049 TMPRSS13Q9BYE2 586 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 NTNG1Q9Y2I2 539 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 NEURL1O76050 574 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 RTN4RL2Q86UN3 420 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 OR10G8Q8NGN5 311 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 PFN4Q8NHR9 129 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 IL17DQ8TAD2 202 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 ABHD3Q8WU67 409 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 DOK5Q9P104 306 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 ST3GAL6Q9Y274 331 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 ANKRD20A5PA0PJZ0 165 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 J3QW42 95 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 UCP2P55851 309 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 PMCHL1Q16048 86 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 NIT1Q86X76 327 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 FAM169BQ8N8A8 192 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 RGP1Q92546 391 aaPredicted RBP6.78□□□□□ -1.32
USP3-201ENST00000268049 FAM186AA6NE01 2351 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 VWA8A3KMH1 1905 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 COL4A6Q14031 1691 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 GPR179Q6PRD1 2367 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 A0A1B0GUS0 222 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 J3QT63 122 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 OR2A4O95047 310 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 HIST1H1EP10412 219 aaKnown RBP6.78□□□□□ -1.32
USP3-201ENST00000268049 CDKN1AP38936 164 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 ZNF345Q14585 488 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 IL13RA2Q14627 380 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 ZNF141Q15928 474 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 UNQ5815/PRO19632Q6UWF5 114 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 SCGB1D4Q6XE38 83 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 LINC00596Q86U02 117 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 LURAP1LQ8IV03 231 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 OR52N4Q8NGI2 321 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 Q96MF0 132 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 OR2A7Q96R45 310 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 NPIPB9F8W1W9 429 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 ONECUT2O95948 504 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 HPXP02790 462 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 THY1P04216 161 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 SCGB1A1P11684 91 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 MUC1P15941 1255 aaPredicted RBP6.78□□□□□ -1.32
USP3-201ENST00000268049 CD40P25942 277 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 ACY3Q96HD9 319 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 ABHD1Q96SE0 405 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 WDR61Q9GZS3 305 aaKnown RBP6.78□□□□□ -1.32
USP3-201ENST00000268049 TNFRSF12AQ9NP84 129 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 FOXS1O43638 330 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 FUT3P21217 361 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 OPRK1P41145 380 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 TCF15Q12870 199 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 PNLIPRP3Q17RR3 467 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 ACSF3Q4G176 576 aaPredicted RBP6.78□□□□□ -1.32
USP3-201ENST00000268049 OR1K1Q8NGR3 316 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 SLC17A5Q9NRA2 495 aa6.78□□□□□ -1.32
USP3-201ENST00000268049 NGFRP08138 427 aa6.77□□□□□ -1.33
USP3-201ENST00000268049 CAMPP49913 170 aa6.77□□□□□ -1.33
USP3-201ENST00000268049 Q6ZT83 130 aa6.77□□□□□ -1.33
USP3-201ENST00000268049 WFDC3Q8IUB2 231 aa6.77□□□□□ -1.33
USP3-201ENST00000268049 C10orf35Q96D05 121 aa6.77□□□□□ -1.33
USP3-201ENST00000268049 ORAI1Q96D31 301 aa6.77□□□□□ -1.33
USP3-201ENST00000268049 MARS2Q96GW9 593 aaKnown RBP6.77□□□□□ -1.33
USP3-201ENST00000268049 OR2H1Q9GZK4 316 aa6.77□□□□□ -1.33
USP3-201ENST00000268049 MANBALQ9NQG1 85 aa6.77□□□□□ -1.33
USP3-201ENST00000268049 B9D1Q9UPM9 204 aa6.77□□□□□ -1.33
USP3-201ENST00000268049 WIPI2Q9Y4P8 454 aa6.77□□□□□ -1.33
USP3-201ENST00000268049 A0A1W2PRX2 142 aa6.77□□□□□ -1.33
USP3-201ENST00000268049 SLC17A2O00624 439 aa6.77□□□□□ -1.33
USP3-201ENST00000268049 CA11O75493 328 aa6.77□□□□□ -1.33
USP3-201ENST00000268049 PRSS1P07477 247 aa6.77□□□□□ -1.33
USP3-201ENST00000268049 HIST1H1BP16401 226 aaKnown RBP6.77□□□□□ -1.33
USP3-201ENST00000268049 FGF8P55075 233 aaPredicted RBP6.77□□□□□ -1.33
USP3-201ENST00000268049 LCN2P80188 198 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms