RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 C7orf77A4D0Y5 90 aa10.84□□□□□ -0.67
CPSF6-201ENST00000266679 PLA2G2AP14555 144 aa10.84□□□□□ -0.67
CPSF6-201ENST00000266679 DAOP14920 347 aa10.84□□□□□ -0.67
CPSF6-201ENST00000266679 FABP6P51161 128 aa10.84□□□□□ -0.67
CPSF6-201ENST00000266679 AESQ08117 197 aa10.84□□□□□ -0.67
CPSF6-201ENST00000266679 ACSF3Q4G176 576 aaPredicted RBP10.84□□□□□ -0.67
CPSF6-201ENST00000266679 OR2B11Q5JQS5 317 aa10.84□□□□□ -0.67
CPSF6-201ENST00000266679 C11orf53Q8IXP5 236 aa10.84□□□□□ -0.67
CPSF6-201ENST00000266679 ZNF808Q8N4W9 903 aaPredicted RBP10.84□□□□□ -0.67
CPSF6-201ENST00000266679 OR52L2PQ8NGH6 319 aa10.84□□□□□ -0.67
CPSF6-201ENST00000266679 C2CD4CQ8TF44 421 aa10.84□□□□□ -0.67
CPSF6-201ENST00000266679 OPN3Q9H1Y3 402 aaPredicted RBP10.84□□□□□ -0.67
CPSF6-201ENST00000266679 MSL2Q9HCI7 577 aa10.84□□□□□ -0.67
CPSF6-201ENST00000266679 C12orf77C9JDV5 145 aa10.84□□□□□ -0.67
CPSF6-201ENST00000266679 SYNGR2O43760 224 aa10.84□□□□□ -0.67
CPSF6-201ENST00000266679 HOXB1P14653 301 aaPredicted RBP10.84□□□□□ -0.67
CPSF6-201ENST00000266679 RAB13P51153 203 aa10.84□□□□□ -0.67
CPSF6-201ENST00000266679 HAGHQ16775 308 aa10.84□□□□□ -0.67
CPSF6-201ENST00000266679 ACP7Q6ZNF0 438 aa10.84□□□□□ -0.67
CPSF6-201ENST00000266679 Q6ZR03 302 aa10.84□□□□□ -0.67
CPSF6-201ENST00000266679 THNSL2Q86YJ6 484 aa10.84□□□□□ -0.67
CPSF6-201ENST00000266679 C1orf162Q8NEQ5 155 aaPredicted RBP10.84□□□□□ -0.67
CPSF6-201ENST00000266679 OR2D2Q9H210 308 aa10.84□□□□□ -0.67
CPSF6-201ENST00000266679 PSENENQ9NZ42 101 aa10.84□□□□□ -0.67
CPSF6-201ENST00000266679 NBASA2RRP1 2371 aa10.83□□□□□ -0.68
CPSF6-201ENST00000266679 A0A1B0GW64 132 aa10.83□□□□□ -0.68
CPSF6-201ENST00000266679 RBFOX3A6NFN3 312 aa10.83□□□□□ -0.68
CPSF6-201ENST00000266679 NDUFA2O43678 99 aa10.83□□□□□ -0.68
CPSF6-201ENST00000266679 DFFBO76075 338 aa10.83□□□□□ -0.68
CPSF6-201ENST00000266679 IFNA5P01569 189 aa10.83□□□□□ -0.68
CPSF6-201ENST00000266679 METTL15P1P0C7V9 234 aa10.83□□□□□ -0.68
CPSF6-201ENST00000266679 IL2RGP31785 369 aa10.83□□□□□ -0.68
CPSF6-201ENST00000266679 TAS2R30P59541 319 aa10.83□□□□□ -0.68
CPSF6-201ENST00000266679 C15orf54Q8N8G6 183 aa10.83□□□□□ -0.68
CPSF6-201ENST00000266679 ZNF610Q8N9Z0 462 aa10.83□□□□□ -0.68
CPSF6-201ENST00000266679 C5orf30Q96GV9 206 aa10.83□□□□□ -0.68
CPSF6-201ENST00000266679 METRNQ9UJH8 293 aa10.83□□□□□ -0.68
CPSF6-201ENST00000266679 CHD3Q12873 2000 aaKnown RBP10.83□□□□□ -0.68
CPSF6-201ENST00000266679 PRR14LQ5THK1 2151 aa10.83□□□□□ -0.68
CPSF6-201ENST00000266679 A0A1W2PPH5 198 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 HBZP02008 142 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 GABRA2P47869 451 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 CEBPGP53567 150 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 TBR1Q16650 682 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 WDR82Q6UXN9 313 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 MRGPRDQ8TDS7 321 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 ISOC2Q96AB3 205 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 COQ2Q96H96 371 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 WSB1Q9Y6I7 421 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 UBR5O95071 2799 aaPredicted RBP10.82□□□□□ -0.68
CPSF6-201ENST00000266679 IGHV1-18A0A0C4DH31 117 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 RNF212BA8MTL3 300 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 PTBP3O95758 552 aaKnown RBP10.82□□□□□ -0.68
CPSF6-201ENST00000266679 GCH1P30793 250 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 CD200P41217 278 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 ARL16Q0P5N6 197 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 ALKBH2Q6NS38 261 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 HAPLN4Q86UW8 402 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 ZNF645Q8N7E2 425 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 TPRX1Q8N7U7 411 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 SFT2D1Q8WV19 159 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 HIST1H2BAQ96A08 127 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 GALMQ96C23 342 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 RSG1Q9BU20 258 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 PROCRQ9UNN8 238 aa10.82□□□□□ -0.68
CPSF6-201ENST00000266679 IGHV2OR16-5A0A0B4J2B6 119 aa10.81□□□□□ -0.68
CPSF6-201ENST00000266679 OOEPA6NGQ2 149 aa10.81□□□□□ -0.68
CPSF6-201ENST00000266679 RAMP3O60896 148 aa10.81□□□□□ -0.68
CPSF6-201ENST00000266679 ACAA1P09110 424 aaPredicted RBP10.81□□□□□ -0.68
CPSF6-201ENST00000266679 KITLGP21583 273 aa10.81□□□□□ -0.68
CPSF6-201ENST00000266679 RPL35P42766 123 aaKnown RBP10.81□□□□□ -0.68
CPSF6-201ENST00000266679 AKR1D1P51857 326 aa10.81□□□□□ -0.68
CPSF6-201ENST00000266679 COL10A1Q03692 680 aa10.81□□□□□ -0.68
CPSF6-201ENST00000266679 ZNF816Q0VGE8 651 aaPredicted RBP10.81□□□□□ -0.68
CPSF6-201ENST00000266679 ZNF718Q3SXZ3 478 aa10.81□□□□□ -0.68
CPSF6-201ENST00000266679 SOHLH1Q5JUK2 328 aa10.81□□□□□ -0.68
CPSF6-201ENST00000266679 SLC35E4Q6ICL7 350 aa10.81□□□□□ -0.68
CPSF6-201ENST00000266679 BTNL3Q6UXE8 466 aa10.81□□□□□ -0.68
CPSF6-201ENST00000266679 BHLHA15Q7RTS1 189 aaPredicted RBP10.81□□□□□ -0.68
CPSF6-201ENST00000266679 TAAR6Q96RI8 345 aa10.81□□□□□ -0.68
CPSF6-201ENST00000266679 KIAA1456Q9P272 454 aa10.81□□□□□ -0.68
CPSF6-201ENST00000266679 PUS1Q9Y606 427 aaKnown RBP eCLIP10.81□□□□□ -0.68
CPSF6-201ENST00000266679 HECTD1Q9ULT8 2610 aa10.81□□□□□ -0.68
CPSF6-201ENST00000266679 BTBD17A6NE02 478 aa10.81□□□□□ -0.68
CPSF6-201ENST00000266679 TNFSF13O75888 250 aa10.81□□□□□ -0.68
CPSF6-201ENST00000266679 RPL30P62888 115 aaKnown RBP10.81□□□□□ -0.68
CPSF6-201ENST00000266679 KRBOX4Q5JUW0 171 aa10.81□□□□□ -0.68
CPSF6-201ENST00000266679 SPANXN5Q5MJ07 72 aa10.81□□□□□ -0.68
CPSF6-201ENST00000266679 LILRB2Q8N423 598 aa10.81□□□□□ -0.68
CPSF6-201ENST00000266679 ZNF525Q8N782 197 aa10.81□□□□□ -0.68
CPSF6-201ENST00000266679 SCGB1C1Q8TD33 95 aa10.81□□□□□ -0.68
CPSF6-201ENST00000266679 PLSCR4Q9NRQ2 329 aa10.81□□□□□ -0.68
CPSF6-201ENST00000266679 INTS1Q8N201 2190 aaKnown RBP10.81□□□□□ -0.68
CPSF6-201ENST00000266679 DIDO1Q9BTC0 2240 aaKnown RBP10.8□□□□□ -0.68
CPSF6-201ENST00000266679 IGHV3-43A0A0B4J1X8 118 aa10.8□□□□□ -0.68
CPSF6-201ENST00000266679 A0A1W2PPE2 198 aa10.8□□□□□ -0.68
CPSF6-201ENST00000266679 IGLV1-44P01699 117 aa10.8□□□□□ -0.68
CPSF6-201ENST00000266679 FBP1P09467 338 aa10.8□□□□□ -0.68
CPSF6-201ENST00000266679 IGHV3-43DP0DP04 118 aa10.8□□□□□ -0.68
CPSF6-201ENST00000266679 G6PCP35575 357 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms