RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 TNFRSF19Q9NS68 423 aa13.24□□□□□ -0.29
TIMP3-201ENST00000266085 DLL1O00548 723 aa13.24□□□□□ -0.29
TIMP3-201ENST00000266085 PAX6P26367 422 aa13.24□□□□□ -0.29
TIMP3-201ENST00000266085 NPBWR2P48146 333 aa13.24□□□□□ -0.29
TIMP3-201ENST00000266085 FAM27E3Q08E93 113 aa13.24□□□□□ -0.29
TIMP3-201ENST00000266085 PNRC1Q12796 327 aaPredicted RBP13.24□□□□□ -0.29
TIMP3-201ENST00000266085 TCTEX1D1Q8N7M0 179 aa13.24□□□□□ -0.29
TIMP3-201ENST00000266085 LRRC75AQ8NAA5 344 aa13.24□□□□□ -0.29
TIMP3-201ENST00000266085 OR1B1Q8NGR6 318 aa13.24□□□□□ -0.29
TIMP3-201ENST00000266085 COA4Q9NYJ1 87 aa13.24□□□□□ -0.29
TIMP3-201ENST00000266085 ATP6V0CP27449 155 aa13.23□□□□□ -0.29
TIMP3-201ENST00000266085 MANBALQ9NQG1 85 aa13.23□□□□□ -0.29
TIMP3-201ENST00000266085 BVESQ8NE79 360 aa13.23□□□□□ -0.29
TIMP3-201ENST00000266085 TMEM37Q8WXS4 190 aa13.23□□□□□ -0.29
TIMP3-201ENST00000266085 ELF5Q9UKW6 265 aaPredicted RBP13.23□□□□□ -0.29
TIMP3-201ENST00000266085 NAT2P11245 290 aa13.23□□□□□ -0.29
TIMP3-201ENST00000266085 COL4A6Q14031 1691 aa13.23□□□□□ -0.29
TIMP3-201ENST00000266085 ZNF407Q9C0G0 2248 aa13.23□□□□□ -0.29
TIMP3-201ENST00000266085 P2RY4P51582 365 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 BSXQ3C1V8 233 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 SLC25A53Q5H9E4 307 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 TEPPQ6URK8 271 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 SPNS3Q6ZMD2 512 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 PDPNQ86YL7 162 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 OR4P4Q8NGL7 312 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 FAM131CQ96AQ9 280 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 ZNF552Q9H707 407 aaPredicted RBP13.22□□□□□ -0.29
TIMP3-201ENST00000266085 DEPPQ9NTK1 212 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 MGAMO43451 1857 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 NDUFA2O43678 99 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 DAOP14920 347 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 ERVFRD-1P60508 538 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 PSG5Q15238 335 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 TMEM252Q8N6L7 170 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 USF3Q68DE3 2245 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 NUBP1P53384 320 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 NHLH2Q02577 135 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 OR1L1Q8NH94 360 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 CHAC2Q8WUX2 184 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 RGP1Q92546 391 aaPredicted RBP13.22□□□□□ -0.29
TIMP3-201ENST00000266085 PCNX2A6NKB5 2137 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 C11orf94C9JXX5 98 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 GALR1P47211 349 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 ID4P47928 161 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 NAAAQ02083 359 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 SLC35E3Q7Z769 313 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 NAT8BQ9UHF3 227 aa13.22□□□□□ -0.29
TIMP3-201ENST00000266085 TIMM23BQ5SRD1 257 aa13.21□□□□□ -0.29
TIMP3-201ENST00000266085 ZNF362Q5T0B9 420 aaPredicted RBP13.21□□□□□ -0.29
TIMP3-201ENST00000266085 FAM103A1Q9BTL3 118 aaKnown RBP13.21□□□□□ -0.29
TIMP3-201ENST00000266085 VAX2Q9UIW0 290 aa13.21□□□□□ -0.29
TIMP3-201ENST00000266085 CADP27708 2225 aa13.21□□□□□ -0.29
TIMP3-201ENST00000266085 NPIPB7O75200 414 aa13.21□□□□□ -0.29
TIMP3-201ENST00000266085 KLK2P20151 261 aa13.21□□□□□ -0.29
TIMP3-201ENST00000266085 OVCH2Q7RTZ1 564 aa13.21□□□□□ -0.29
TIMP3-201ENST00000266085 TRAPPC1Q9Y5R8 145 aa13.21□□□□□ -0.29
TIMP3-201ENST00000266085 GATCO43716 136 aaKnown RBP13.21□□□□□ -0.3
TIMP3-201ENST00000266085 APELAP0DMC3 54 aa13.21□□□□□ -0.3
TIMP3-201ENST00000266085 PTGDSP41222 190 aa13.21□□□□□ -0.3
TIMP3-201ENST00000266085 SYNGR3O43761 229 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 MC5RP33032 325 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 GAMTQ14353 236 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 KCNMB1Q16558 191 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 NRN1LQ496H8 165 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 STPG2Q8N412 459 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 FAM122AQ96E09 287 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 POM121Q96HA1 1249 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 NOTCH3Q9UM47 2321 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 IFNL4K9M1U5 179 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 MFNGO00587 321 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 SPINK4O60575 86 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 CECR9P0C854 216 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 LINC01560Q8TB33 94 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 PARP11Q9NR21 331 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 CALYQ9NYX4 217 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 SMIM17P0DL12 118 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 RNF212Q495C1 297 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 CLEC2AQ6UVW9 174 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 OR8I2Q8N0Y5 310 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 FAM210BQ96KR6 192 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 OR5AC2Q9NZP5 309 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 OR51B2Q9Y5P1 312 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 CTXND1A0A1B0GTU2 59 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 CYB5R3P00387 301 aaPredicted RBP13.2□□□□□ -0.3
TIMP3-201ENST00000266085 RAB5AP20339 215 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 GLRXP35754 106 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 SLC24A4Q8NFF2 622 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 OR4X1Q8NH49 305 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 Q8WTZ3 238 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 DPF1Q92782 380 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 NPAS1Q99742 590 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 NAT8Q9UHE5 227 aa13.2□□□□□ -0.3
TIMP3-201ENST00000266085 SLC31A2O15432 143 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 NEURL1O76050 574 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 GAPDHP04406 335 aaKnown RBP13.19□□□□□ -0.3
TIMP3-201ENST00000266085 CXCL2P19875 107 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 DHRS7BQ6IAN0 325 aaPredicted RBP13.19□□□□□ -0.3
TIMP3-201ENST00000266085 LINC00052Q96N35 136 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 FAM208BQ5VWN6 2430 aa13.19□□□□□ -0.3
TIMP3-201ENST00000266085 CUL9Q8IWT3 2517 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms