RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 RPS18P62269 152 aaKnown RBP11.19□□□□□ -0.62
NUP54-201ENST00000264883 FOXL1Q12952 345 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 MYPOPQ86VE0 399 aaPredicted RBP11.19□□□□□ -0.62
NUP54-201ENST00000264883 ZNF295-AS1Q8N0V1 137 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 GATAD1Q8WUU5 269 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 RAB40CQ96S21 281 aa11.19□□□□□ -0.62
NUP54-201ENST00000264883 IGHV3-20A0A0C4DH32 117 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 IGHV2-70DA0A0C4DH43 119 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 DIRC3C9JPN6 131 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 M0QZ24 198 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 HYPMO75409 117 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 ZFAND5O76080 213 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 IGLC2P0DOY2 106 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 IGLC3P0DOY3 106 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 CRISP2P16562 243 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 OR1D5P58170 312 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 KRTDAPP60985 99 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 YPEL3P61236 119 aaPredicted RBP11.18□□□□□ -0.62
NUP54-201ENST00000264883 FFAR4Q5NUL3 377 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 PMS2CLQ68D20 193 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 C16orf47Q6ZP98 133 aaPredicted RBP11.18□□□□□ -0.62
NUP54-201ENST00000264883 C1orf174Q8IYL3 243 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 SLC25A45Q8N413 288 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 RPP25LQ8N5L8 163 aaKnown RBP11.18□□□□□ -0.62
NUP54-201ENST00000264883 SLC7A10Q9NS82 523 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 FGF21Q9NSA1 209 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 ELOVL5Q9NYP7 299 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 HSPB7Q9UBY9 170 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 A0A1W2PNR3 127 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 F6UZH7 168 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 OPN1LWP04000 364 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 CD99P14209 185 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 UCP1P25874 307 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 MLF1P58340 268 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 ARL16Q0P5N6 197 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 MORN2Q502X0 79 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 VHLLQ6RSH7 139 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 BAGE3Q86Y29 109 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 BAGE2Q86Y30 109 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 FADS6Q8N9I5 356 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 IFI44Q8TCB0 444 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 NEIL1Q96FI4 390 aaPredicted RBP11.18□□□□□ -0.62
NUP54-201ENST00000264883 FBXL7Q9UJT9 491 aa11.18□□□□□ -0.62
NUP54-201ENST00000264883 PCDH15Q96QU1 1955 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 SHANK1Q9Y566 2161 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 IGHV2OR16-5A0A0B4J2B6 119 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 MLNRO43193 412 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 CYC1P08574 325 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 WNT2P09544 360 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 HINT1P49773 126 aaPredicted RBP11.17□□□□□ -0.62
NUP54-201ENST00000264883 LHX2P50458 406 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 MAJINQ3KP22 176 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 LYSMD4Q5XG99 296 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 TMEM211Q6ICI0 200 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 WDR74Q6RFH5 385 aaPredicted RBP11.17□□□□□ -0.62
NUP54-201ENST00000264883 ZNF818PQ6ZRF7 136 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.17□□□□□ -0.62
NUP54-201ENST00000264883 DTX1Q86Y01 620 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 MCEMP1Q8IX19 187 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 GAPTQ8N292 157 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 SGMS2Q8NHU3 365 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 THAP3Q8WTV1 239 aaPredicted RBP11.17□□□□□ -0.62
NUP54-201ENST00000264883 CORO2AQ92828 525 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 NABP1Q96AH0 204 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 STARD4Q96DR4 205 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 WDR61Q9GZS3 305 aaKnown RBP11.17□□□□□ -0.62
NUP54-201ENST00000264883 ZNF703Q9H7S9 590 aaPredicted RBP11.17□□□□□ -0.62
NUP54-201ENST00000264883 PI4KAP42356 2102 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 TRAV34A0A0B4J273 112 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 DHHO43323 396 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 MMP23AO75900 390 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 IGKV1D-33P01593 117 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 IGKV1-33P01594 117 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 S100A7P31151 101 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 SIGLECL1Q8N7X8 197 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 Q8N976 141 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 SVIPQ8NHG7 77 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 PSMF1Q92530 271 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 FAM103A1Q9BTL3 118 aaKnown RBP11.17□□□□□ -0.62
NUP54-201ENST00000264883 SLC25A22Q9H936 323 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 BET1LQ9NYM9 111 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 RNF24Q9Y225 148 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 RNF114Q9Y508 228 aa11.17□□□□□ -0.62
NUP54-201ENST00000264883 C1QTNF9BB2RNN3 333 aa11.16□□□□□ -0.62
NUP54-201ENST00000264883 BMP5P22003 454 aa11.16□□□□□ -0.62
NUP54-201ENST00000264883 HBG1P69891 147 aa11.16□□□□□ -0.62
NUP54-201ENST00000264883 HBG2P69892 147 aa11.16□□□□□ -0.62
NUP54-201ENST00000264883 CFHR1Q03591 330 aa11.16□□□□□ -0.62
NUP54-201ENST00000264883 SRSF7Q16629 238 aaKnown RBP eCLIP11.16□□□□□ -0.62
NUP54-201ENST00000264883 PIGYQ3MUY2 71 aa11.16□□□□□ -0.62
NUP54-201ENST00000264883 ZNF468Q5VIY5 522 aaPredicted RBP11.16□□□□□ -0.62
NUP54-201ENST00000264883 Q6ZPA2 131 aa11.16□□□□□ -0.62
NUP54-201ENST00000264883 OR5D13Q8NGL4 314 aa11.16□□□□□ -0.62
NUP54-201ENST00000264883 BORCS8Q96FH0 119 aa11.16□□□□□ -0.62
NUP54-201ENST00000264883 ZNF586Q9NXT0 402 aa11.16□□□□□ -0.62
NUP54-201ENST00000264883 PILRBQ9UKJ0 227 aa11.16□□□□□ -0.62
NUP54-201ENST00000264883 CIDEAO60543 219 aa11.16□□□□□ -0.62
NUP54-201ENST00000264883 PDCD6O75340 191 aa11.16□□□□□ -0.62
NUP54-201ENST00000264883 NRASP01111 189 aa11.16□□□□□ -0.62
NUP54-201ENST00000264883 KRASP01116 189 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms