RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 A0A0B4J293 547 aa13.1□□□□□ -0.31
NID1-201ENST00000264187 PATE3B3GLJ2 98 aa13.1□□□□□ -0.31
NID1-201ENST00000264187 CYB5R3P00387 301 aaPredicted RBP13.1□□□□□ -0.31
NID1-201ENST00000264187 HSPB1P04792 205 aaKnown RBP13.1□□□□□ -0.31
NID1-201ENST00000264187 FCGR3AP08637 254 aa13.1□□□□□ -0.31
NID1-201ENST00000264187 RBM11P57052 281 aaKnown RBP13.1□□□□□ -0.31
NID1-201ENST00000264187 ZIC1Q15915 447 aa13.1□□□□□ -0.31
NID1-201ENST00000264187 H1FOOQ8IZA3 346 aaPredicted RBP13.1□□□□□ -0.31
NID1-201ENST00000264187 OPN3Q9H1Y3 402 aaPredicted RBP13.1□□□□□ -0.31
NID1-201ENST00000264187 IL9P15248 144 aa13.09□□□□□ -0.31
NID1-201ENST00000264187 ZNF826PQ6ZT77 177 aa13.09□□□□□ -0.31
NID1-201ENST00000264187 OR10S1Q8NGN2 331 aa13.09□□□□□ -0.31
NID1-201ENST00000264187 MAP1LC3AQ9H492 121 aa13.09□□□□□ -0.31
NID1-201ENST00000264187 CDC42EP3Q9UKI2 254 aa13.09□□□□□ -0.31
NID1-201ENST00000264187 CIRBPQ14011 172 aaKnown RBP13.09□□□□□ -0.31
NID1-201ENST00000264187 FBXW9Q5XUX1 488 aa13.09□□□□□ -0.31
NID1-201ENST00000264187 KLHDC2Q9Y2U9 406 aa13.09□□□□□ -0.31
NID1-201ENST00000264187 A0A1W2PP11 408 aa13.09□□□□□ -0.31
NID1-201ENST00000264187 TGFAP01135 160 aa13.09□□□□□ -0.31
NID1-201ENST00000264187 LIMS2Q7Z4I7 341 aa13.09□□□□□ -0.31
NID1-201ENST00000264187 HOGA1Q86XE5 327 aa13.09□□□□□ -0.31
NID1-201ENST00000264187 ZBTB34Q8NCN2 500 aa13.09□□□□□ -0.31
NID1-201ENST00000264187 ZNF418Q8TF45 676 aaPredicted RBP13.09□□□□□ -0.31
NID1-201ENST00000264187 C10orf35Q96D05 121 aa13.09□□□□□ -0.31
NID1-201ENST00000264187 CXorf65A6NEN9 183 aa13.09□□□□□ -0.31
NID1-201ENST00000264187 UPK3AO75631 287 aa13.09□□□□□ -0.31
NID1-201ENST00000264187 SCTP09683 121 aa13.09□□□□□ -0.31
NID1-201ENST00000264187 RND2P52198 227 aa13.09□□□□□ -0.31
NID1-201ENST00000264187 CYB5R2Q6BCY4 276 aa13.09□□□□□ -0.31
NID1-201ENST00000264187 NRIP2Q9BQI9 281 aa13.09□□□□□ -0.31
NID1-201ENST00000264187 hCG_38984A0A1B0GV85 526 aa13.08□□□□□ -0.31
NID1-201ENST00000264187 DNAL4O96015 105 aa13.08□□□□□ -0.31
NID1-201ENST00000264187 IL11P20809 199 aa13.08□□□□□ -0.31
NID1-201ENST00000264187 FAM209BQ5JX69 171 aa13.08□□□□□ -0.31
NID1-201ENST00000264187 LHX8Q68G74 356 aa13.08□□□□□ -0.31
NID1-201ENST00000264187 HMGCLL1Q8TB92 370 aa13.08□□□□□ -0.31
NID1-201ENST00000264187 LEAP2Q969E1 77 aa13.08□□□□□ -0.31
NID1-201ENST00000264187 GPR82Q96P67 336 aa13.08□□□□□ -0.31
NID1-201ENST00000264187 ZNF318Q5VUA4 2279 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 IGHV3OR16-13A0A075B7E8 117 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 IGHV3-74A0A0B4J1X5 117 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 GRIFINA4D1Z8 144 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 TMEM210A6NLX4 147 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 SRIP30626 198 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 SUMO2P61956 95 aaKnown RBP13.08□□□□□ -0.32
NID1-201ENST00000264187 FAM209AQ5JX71 171 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 NFAM1Q8NET5 270 aaPredicted RBP13.08□□□□□ -0.32
NID1-201ENST00000264187 ZCCHC14Q8WYQ9 949 aaKnown RBP13.08□□□□□ -0.32
NID1-201ENST00000264187 GEMIN7Q9H840 131 aaKnown RBP13.08□□□□□ -0.32
NID1-201ENST00000264187 CBLN4Q9NTU7 201 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 IGHV3OR16-10A0A075B7F0 116 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 TMEM229AB2RXF0 380 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 ATXN7O15265 892 aaPredicted RBP13.08□□□□□ -0.32
NID1-201ENST00000264187 BGLAPP02818 100 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 CXCL2P19875 107 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 C12orf54Q6X4T0 127 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 RBM38Q9H0Z9 239 aaKnown RBP13.08□□□□□ -0.32
NID1-201ENST00000264187 RBKSQ9H477 322 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 YBX2Q9Y2T7 364 aaKnown RBP13.08□□□□□ -0.32
NID1-201ENST00000264187 MYH14Q7Z406 1995 aaKnown RBP13.08□□□□□ -0.32
NID1-201ENST00000264187 H0YL77 283 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 PLPPR5Q32ZL2 321 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 TMEM136Q6ZRR5 245 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 RFLNBQ8N5W9 214 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 WDR34Q96EX3 536 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 MS4A3Q96HJ5 214 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 RARRES2Q99969 163 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 SLC25A34Q6PIV7 304 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 TMEM91Q6ZNR0 172 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 OR1P1Q8NH06 330 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 DTX4Q9Y2E6 619 aa13.08□□□□□ -0.32
NID1-201ENST00000264187 INO80CQ6PI98 192 aaPredicted RBP13.07□□□□□ -0.32
NID1-201ENST00000264187 SF3B6Q9Y3B4 125 aaKnown RBP13.07□□□□□ -0.32
NID1-201ENST00000264187 A0A1W2PQD3 144 aa13.07□□□□□ -0.32
NID1-201ENST00000264187 MOSPD3O75425 235 aa13.07□□□□□ -0.32
NID1-201ENST00000264187 GPX1P07203 203 aa13.07□□□□□ -0.32
NID1-201ENST00000264187 OR4D5Q8NGN0 318 aa13.07□□□□□ -0.32
NID1-201ENST00000264187 GAPDHP04406 335 aaKnown RBP13.07□□□□□ -0.32
NID1-201ENST00000264187 ZNF79Q15937 498 aa13.07□□□□□ -0.32
NID1-201ENST00000264187 CXorf66Q5JRM2 361 aaPredicted RBP13.07□□□□□ -0.32
NID1-201ENST00000264187 C10orf126Q8N4M7 172 aa13.07□□□□□ -0.32
NID1-201ENST00000264187 NUDT10Q8NFP7 164 aa13.07□□□□□ -0.32
NID1-201ENST00000264187 NUDT11Q96G61 164 aa13.07□□□□□ -0.32
NID1-201ENST00000264187 EVPLQ92817 2033 aa13.07□□□□□ -0.32
NID1-201ENST00000264187 FAM106CPP0CH98 169 aa13.07□□□□□ -0.32
NID1-201ENST00000264187 UNC119Q13432 240 aa13.07□□□□□ -0.32
NID1-201ENST00000264187 KCNK7Q9Y2U2 307 aa13.07□□□□□ -0.32
NID1-201ENST00000264187 LINC00862A6NCI5 91 aa13.06□□□□□ -0.32
NID1-201ENST00000264187 LIFP15018 202 aa13.06□□□□□ -0.32
NID1-201ENST00000264187 NANOS3P60323 173 aaKnown RBP13.06□□□□□ -0.32
NID1-201ENST00000264187 TMEM252Q8N6L7 170 aa13.06□□□□□ -0.32
NID1-201ENST00000264187 C9JCJ5 164 aa13.06□□□□□ -0.32
NID1-201ENST00000264187 SNAI2O43623 268 aa13.06□□□□□ -0.32
NID1-201ENST00000264187 SLC25A17O43808 307 aa13.06□□□□□ -0.32
NID1-201ENST00000264187 GDF9O60383 454 aa13.06□□□□□ -0.32
NID1-201ENST00000264187 CLEC2AQ6UVW9 174 aa13.06□□□□□ -0.32
NID1-201ENST00000264187 BIVMQ86UB2 503 aa13.06□□□□□ -0.32
NID1-201ENST00000264187 DUX5Q96PT3 197 aa13.06□□□□□ -0.32
NID1-201ENST00000264187 TLNRD1Q9H1K6 362 aa13.06□□□□□ -0.32
NID1-201ENST00000264187 TTTY12Q9BZ98 90 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms