RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 ABHD12Q8N2K0 398 aa14.9□□□□□ -0.02
SDF4-201ENST00000263741 BEST4Q8NFU0 473 aa14.9□□□□□ -0.02
SDF4-201ENST00000263741 OR11H4Q8NGC9 324 aa14.9□□□□□ -0.02
SDF4-201ENST00000263741 OR2T35Q8NGX2 323 aa14.9□□□□□ -0.02
SDF4-201ENST00000263741 IL1F10Q8WWZ1 152 aa14.9□□□□□ -0.02
SDF4-201ENST00000263741 DUX5Q96PT3 197 aa14.9□□□□□ -0.02
SDF4-201ENST00000263741 KCNIP1Q9NZI2 227 aa14.9□□□□□ -0.02
SDF4-201ENST00000263741 UBQLN2Q9UHD9 624 aa14.9□□□□□ -0.02
SDF4-201ENST00000263741 SERPINE3A8MV23 424 aa14.89□□□□□ -0.03
SDF4-201ENST00000263741 ODF3BA8MYP8 253 aa14.89□□□□□ -0.03
SDF4-201ENST00000263741 FCER2P06734 321 aa14.89□□□□□ -0.03
SDF4-201ENST00000263741 FPR2P25090 351 aa14.89□□□□□ -0.03
SDF4-201ENST00000263741 LOXL3P58215 753 aa14.89□□□□□ -0.03
SDF4-201ENST00000263741 RAB14P61106 215 aa14.89□□□□□ -0.03
SDF4-201ENST00000263741 ZNF626Q68DY1 528 aa14.89□□□□□ -0.03
SDF4-201ENST00000263741 C9orf139Q6ZV77 190 aa14.89□□□□□ -0.03
SDF4-201ENST00000263741 OR52L2PQ8NGH6 319 aa14.89□□□□□ -0.03
SDF4-201ENST00000263741 Q9N2K0 584 aa14.89□□□□□ -0.03
SDF4-201ENST00000263741 LEUTXA8MZ59 168 aa14.89□□□□□ -0.03
SDF4-201ENST00000263741 ARPC1BO15143 372 aaKnown RBP14.89□□□□□ -0.03
SDF4-201ENST00000263741 SPINT2O43291 252 aa14.89□□□□□ -0.03
SDF4-201ENST00000263741 SSX5O60225 188 aa14.89□□□□□ -0.03
SDF4-201ENST00000263741 SCGNO76038 276 aa14.89□□□□□ -0.03
SDF4-201ENST00000263741 AP2S1P53680 142 aaPredicted RBP14.89□□□□□ -0.03
SDF4-201ENST00000263741 TAS2R20P59543 309 aa14.89□□□□□ -0.03
SDF4-201ENST00000263741 OR11H6Q8NGC7 330 aa14.89□□□□□ -0.03
SDF4-201ENST00000263741 AJUBAQ96IF1 538 aa14.89□□□□□ -0.03
SDF4-201ENST00000263741 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.89□□□□□ -0.03
SDF4-201ENST00000263741 TRBV6-6A0A0A6YYG2 114 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 MEIS3P1A6NDR6 274 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 F2RL2O00254 374 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 CREBL2O60519 120 aaPredicted RBP14.88□□□□□ -0.03
SDF4-201ENST00000263741 GSTP1P09211 210 aaKnown RBP14.88□□□□□ -0.03
SDF4-201ENST00000263741 SCTP09683 121 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 HLA-DRB3P79483 266 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 OR52W1Q6IF63 320 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 TRAT1Q6PIZ9 186 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 GLDNQ6ZMI3 551 aaPredicted RBP14.88□□□□□ -0.03
SDF4-201ENST00000263741 SUN5Q8TC36 379 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 ARPC5LQ9BPX5 153 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 BEX1Q9HBH7 125 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 GFOD1Q9NXC2 390 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 TAS2R8Q9NYW2 309 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 GNG12Q9UBI6 72 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 PSG11Q9UQ72 335 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 ATRQ13535 2644 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 IGKV1D-8A0A087WSZ0 117 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 SNRPGP15A8MWD9 76 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 SLC31A2O15432 143 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 XRCC3O43542 346 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 IL5P05113 134 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 GIPP09681 153 aaPredicted RBP14.88□□□□□ -0.03
SDF4-201ENST00000263741 MOB1BQ7L9L4 216 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 DYNAPQ8N1N2 210 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 OR4P4Q8NGL7 312 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 RIMS4Q9H426 269 aaPredicted RBP14.88□□□□□ -0.03
SDF4-201ENST00000263741 TNFRSF19Q9NS68 423 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 MGAT4CQ9UBM8 478 aa14.88□□□□□ -0.03
SDF4-201ENST00000263741 A0A087X0M5 115 aa14.87□□□□□ -0.03
SDF4-201ENST00000263741 A0A1B0GX30 115 aa14.87□□□□□ -0.03
SDF4-201ENST00000263741 NAT1P18440 290 aa14.87□□□□□ -0.03
SDF4-201ENST00000263741 CD34P28906 385 aa14.87□□□□□ -0.03
SDF4-201ENST00000263741 PPP1CCP36873 323 aaKnown RBP14.87□□□□□ -0.03
SDF4-201ENST00000263741 ESM1Q9NQ30 184 aa14.87□□□□□ -0.03
SDF4-201ENST00000263741 OR2S2Q9NQN1 319 aa14.87□□□□□ -0.03
SDF4-201ENST00000263741 OR1A1Q9P1Q5 309 aa14.87□□□□□ -0.03
SDF4-201ENST00000263741 TMA7Q9Y2S6 64 aaKnown RBP14.87□□□□□ -0.03
SDF4-201ENST00000263741 FAM96BQ9Y3D0 163 aa14.87□□□□□ -0.03
SDF4-201ENST00000263741 A0A0A6YYH2 397 aa14.86□□□□□ -0.03
SDF4-201ENST00000263741 A6NJ64 397 aa14.86□□□□□ -0.03
SDF4-201ENST00000263741 CSF1P09603 554 aa14.86□□□□□ -0.03
SDF4-201ENST00000263741 LGALS4P56470 323 aa14.86□□□□□ -0.03
SDF4-201ENST00000263741 RAP2BP61225 183 aa14.86□□□□□ -0.03
SDF4-201ENST00000263741 TSPAN5P62079 268 aa14.86□□□□□ -0.03
SDF4-201ENST00000263741 SCGB2A2Q13296 93 aa14.86□□□□□ -0.03
SDF4-201ENST00000263741 LGALSLQ3ZCW2 172 aaPredicted RBP14.86□□□□□ -0.03
SDF4-201ENST00000263741 MIDNQ504T8 468 aa14.86□□□□□ -0.03
SDF4-201ENST00000263741 CLLU1Q5K131 121 aa14.86□□□□□ -0.03
SDF4-201ENST00000263741 PARP12Q9H0J9 701 aaKnown RBP14.86□□□□□ -0.03
SDF4-201ENST00000263741 FLVCR2Q9UPI3 526 aa14.86□□□□□ -0.03
SDF4-201ENST00000263741 IGKV1-6A0A0C4DH72 117 aa14.86□□□□□ -0.03
SDF4-201ENST00000263741 NDUFB6O95139 128 aa14.86□□□□□ -0.03
SDF4-201ENST00000263741 IGLV1-47P01700 117 aa14.86□□□□□ -0.03
SDF4-201ENST00000263741 HERPUD1Q15011 391 aa14.86□□□□□ -0.03
SDF4-201ENST00000263741 TUSC1Q2TAM9 212 aa14.86□□□□□ -0.03
SDF4-201ENST00000263741 ZDHHC16Q969W1 377 aa14.86□□□□□ -0.03
SDF4-201ENST00000263741 GALMQ96C23 342 aa14.86□□□□□ -0.03
SDF4-201ENST00000263741 ST6GALNAC5Q9BVH7 336 aa14.86□□□□□ -0.03
SDF4-201ENST00000263741 KLK11Q9UBX7 282 aa14.86□□□□□ -0.03
SDF4-201ENST00000263741 HILPDAQ9Y5L2 63 aa14.86□□□□□ -0.03
SDF4-201ENST00000263741 TOR1AO14656 332 aa14.85□□□□□ -0.03
SDF4-201ENST00000263741 RBBP9O75884 186 aa14.85□□□□□ -0.03
SDF4-201ENST00000263741 BPIFB3P59826 476 aa14.85□□□□□ -0.03
SDF4-201ENST00000263741 EXOSC2Q13868 293 aaKnown RBP14.85□□□□□ -0.03
SDF4-201ENST00000263741 ARL6IP1Q15041 203 aa14.85□□□□□ -0.03
SDF4-201ENST00000263741 SSX2Q16385 188 aa14.85□□□□□ -0.03
SDF4-201ENST00000263741 HLA-DRB5Q30154 266 aa14.85□□□□□ -0.03
SDF4-201ENST00000263741 TOR2AQ5JU69 321 aa14.85□□□□□ -0.03
SDF4-201ENST00000263741 GVQW1Q8N7I0 195 aa14.85□□□□□ -0.03
SDF4-201ENST00000263741 OR10A7Q8NGE5 316 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms