RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 GPR35Q9HC97 309 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 FOXJ2Q9P0K8 574 aa12.75□□□□□ -0.37
XRCC1-201ENST00000262887 MYF5P13349 255 aa12.74□□□□□ -0.37
XRCC1-201ENST00000262887 TFPI2P48307 235 aa12.74□□□□□ -0.37
XRCC1-201ENST00000262887 SELENOTP62341 195 aa12.74□□□□□ -0.37
XRCC1-201ENST00000262887 OR1K1Q8NGR3 316 aa12.74□□□□□ -0.37
XRCC1-201ENST00000262887 BTF3L4Q96K17 158 aa12.74□□□□□ -0.37
XRCC1-201ENST00000262887 DEFB126Q9BYW3 111 aa12.74□□□□□ -0.37
XRCC1-201ENST00000262887 TMEM106BQ9NUM4 274 aa12.74□□□□□ -0.37
XRCC1-201ENST00000262887 UNC13CQ8NB66 2214 aa12.74□□□□□ -0.37
XRCC1-201ENST00000262887 NKX6-3A6NJ46 265 aa12.74□□□□□ -0.37
XRCC1-201ENST00000262887 CEACAM8P31997 349 aaPredicted RBP12.74□□□□□ -0.37
XRCC1-201ENST00000262887 PLA2G5P39877 138 aa12.74□□□□□ -0.37
XRCC1-201ENST00000262887 UBE2NP61088 152 aaKnown RBP12.74□□□□□ -0.37
XRCC1-201ENST00000262887 PPP1CBP62140 327 aa12.74□□□□□ -0.37
XRCC1-201ENST00000262887 CMTM2Q8TAZ6 248 aa12.74□□□□□ -0.37
XRCC1-201ENST00000262887 TIMM9Q9Y5J7 89 aa12.74□□□□□ -0.37
XRCC1-201ENST00000262887 CHCHD2Q9Y6H1 151 aaPredicted RBP12.74□□□□□ -0.37
XRCC1-201ENST00000262887 CNTRLQ7Z7A1 2325 aa12.73□□□□□ -0.37
XRCC1-201ENST00000262887 CTXND1A0A1B0GTU2 59 aa12.73□□□□□ -0.37
XRCC1-201ENST00000262887 A0A1W2PR77 199 aa12.73□□□□□ -0.37
XRCC1-201ENST00000262887 GALR2O43603 387 aaPredicted RBP12.73□□□□□ -0.37
XRCC1-201ENST00000262887 PSG4Q00888 419 aa12.73□□□□□ -0.37
XRCC1-201ENST00000262887 SLC38A11Q08AI6 406 aa12.73□□□□□ -0.37
XRCC1-201ENST00000262887 HYAL1Q12794 435 aa12.73□□□□□ -0.37
XRCC1-201ENST00000262887 TEX43Q6ZNM6 134 aa12.73□□□□□ -0.37
XRCC1-201ENST00000262887 LSM10Q969L4 123 aaKnown RBP12.73□□□□□ -0.37
XRCC1-201ENST00000262887 NEIL1Q96FI4 390 aaPredicted RBP12.73□□□□□ -0.37
XRCC1-201ENST00000262887 ALKBH3Q96Q83 286 aaPredicted RBP12.73□□□□□ -0.37
XRCC1-201ENST00000262887 TMEM38BQ9NVV0 291 aa12.73□□□□□ -0.37
XRCC1-201ENST00000262887 IL36RNQ9UBH0 155 aa12.73□□□□□ -0.37
XRCC1-201ENST00000262887 K7EP13 123 aa12.73□□□□□ -0.37
XRCC1-201ENST00000262887 UMODP07911 640 aa12.73□□□□□ -0.37
XRCC1-201ENST00000262887 RANP62826 216 aaKnown RBP12.73□□□□□ -0.37
XRCC1-201ENST00000262887 TDRG1Q3Y452 100 aa12.73□□□□□ -0.37
XRCC1-201ENST00000262887 ZNF468Q5VIY5 522 aaPredicted RBP12.73□□□□□ -0.37
XRCC1-201ENST00000262887 OR8G2PQ6IF36 304 aa12.73□□□□□ -0.37
XRCC1-201ENST00000262887 ACSM6Q6P461 480 aa12.73□□□□□ -0.37
XRCC1-201ENST00000262887 OR10V1Q8NGI7 309 aa12.73□□□□□ -0.37
XRCC1-201ENST00000262887 HS3ST6Q96QI5 342 aa12.73□□□□□ -0.37
XRCC1-201ENST00000262887 OR2W1Q9Y3N9 320 aa12.73□□□□□ -0.37
XRCC1-201ENST00000262887 PRSS47A8MTI9 375 aa12.72□□□□□ -0.37
XRCC1-201ENST00000262887 TNFSF11O14788 317 aa12.72□□□□□ -0.37
XRCC1-201ENST00000262887 YPEL1O60688 119 aa12.72□□□□□ -0.37
XRCC1-201ENST00000262887 CBR3O75828 277 aa12.72□□□□□ -0.37
XRCC1-201ENST00000262887 CD33P20138 364 aa12.72□□□□□ -0.37
XRCC1-201ENST00000262887 CHRNB4P30926 498 aa12.72□□□□□ -0.37
XRCC1-201ENST00000262887 FGF12P61328 243 aa12.72□□□□□ -0.37
XRCC1-201ENST00000262887 PCSK4Q6UW60 755 aa12.72□□□□□ -0.37
XRCC1-201ENST00000262887 TMEM144Q7Z5S9 345 aa12.72□□□□□ -0.37
XRCC1-201ENST00000262887 IFI44Q8TCB0 444 aa12.72□□□□□ -0.37
XRCC1-201ENST00000262887 YPEL2Q96QA6 119 aa12.72□□□□□ -0.37
XRCC1-201ENST00000262887 ERRFI1Q9UJM3 462 aaPredicted RBP12.72□□□□□ -0.37
XRCC1-201ENST00000262887 CCL25O15444 150 aa12.72□□□□□ -0.37
XRCC1-201ENST00000262887 PAGE4O60829 102 aa12.72□□□□□ -0.37
XRCC1-201ENST00000262887 IGKV1-39P01597 117 aa12.72□□□□□ -0.37
XRCC1-201ENST00000262887 IGKV1D-39P04432 117 aa12.72□□□□□ -0.37
XRCC1-201ENST00000262887 PTTG1IPP53801 180 aa12.72□□□□□ -0.37
XRCC1-201ENST00000262887 TMEM183BQ1AE95 376 aa12.72□□□□□ -0.37
XRCC1-201ENST00000262887 Q8NFD4 153 aa12.72□□□□□ -0.37
XRCC1-201ENST00000262887 ARHGAP21Q5T5U3 1957 aa12.72□□□□□ -0.37
XRCC1-201ENST00000262887 A0A1W2PN81 502 aa12.71□□□□□ -0.37
XRCC1-201ENST00000262887 TIAF1O95411 115 aa12.71□□□□□ -0.37
XRCC1-201ENST00000262887 CD27P26842 260 aa12.71□□□□□ -0.37
XRCC1-201ENST00000262887 KLF3P57682 345 aaPredicted RBP12.71□□□□□ -0.37
XRCC1-201ENST00000262887 TPTE2P1Q5T6R2 138 aa12.71□□□□□ -0.37
XRCC1-201ENST00000262887 KMT5CQ86Y97 462 aa12.71□□□□□ -0.37
XRCC1-201ENST00000262887 OR10G9Q8NGN4 311 aa12.71□□□□□ -0.37
XRCC1-201ENST00000262887 OR10G7Q8NGN6 311 aa12.71□□□□□ -0.37
XRCC1-201ENST00000262887 CLDN23Q96B33 292 aa12.71□□□□□ -0.37
XRCC1-201ENST00000262887 PAM16Q9Y3D7 125 aa12.71□□□□□ -0.37
XRCC1-201ENST00000262887 MLNRO43193 412 aa12.71□□□□□ -0.37
XRCC1-201ENST00000262887 DKK1O94907 266 aa12.71□□□□□ -0.37
XRCC1-201ENST00000262887 CD99P14209 185 aa12.71□□□□□ -0.37
XRCC1-201ENST00000262887 TPPP2P59282 170 aa12.71□□□□□ -0.37
XRCC1-201ENST00000262887 KRTAP27-1Q3LI81 207 aa12.71□□□□□ -0.37
XRCC1-201ENST00000262887 TRIM61Q5EBN2 209 aa12.71□□□□□ -0.37
XRCC1-201ENST00000262887 Q6ZWC4 215 aa12.71□□□□□ -0.37
XRCC1-201ENST00000262887 OR2H1Q9GZK4 316 aa12.71□□□□□ -0.37
XRCC1-201ENST00000262887 C1QTNF9BB2RNN3 333 aa12.7□□□□□ -0.38
XRCC1-201ENST00000262887 IGKV1-5P01602 117 aa12.7□□□□□ -0.38
XRCC1-201ENST00000262887 PAFAH1B2P68402 229 aa12.7□□□□□ -0.38
XRCC1-201ENST00000262887 ZNF324BQ6AW86 544 aaPredicted RBP12.7□□□□□ -0.38
XRCC1-201ENST00000262887 SRXN1Q9BYN0 137 aa12.7□□□□□ -0.38
XRCC1-201ENST00000262887 IGHV1OR15-9A0A0B4J2B8 117 aa12.7□□□□□ -0.38
XRCC1-201ENST00000262887 A0A0J9YW62 118 aa12.7□□□□□ -0.38
XRCC1-201ENST00000262887 A0A1W2PR80 420 aa12.7□□□□□ -0.38
XRCC1-201ENST00000262887 ZNF16P17020 682 aaPredicted RBP12.7□□□□□ -0.38
XRCC1-201ENST00000262887 ADMP35318 185 aa12.7□□□□□ -0.38
XRCC1-201ENST00000262887 C20orf204Q6ZNR8 217 aa12.7□□□□□ -0.38
XRCC1-201ENST00000262887 LINC01551Q86U37 167 aa12.7□□□□□ -0.38
XRCC1-201ENST00000262887 AGBL5Q8NDL9 886 aa12.7□□□□□ -0.38
XRCC1-201ENST00000262887 FGFBP3Q8TAT2 258 aa12.7□□□□□ -0.38
XRCC1-201ENST00000262887 IL1F10Q8WWZ1 152 aa12.7□□□□□ -0.38
XRCC1-201ENST00000262887 VAMP8Q9BV40 100 aa12.7□□□□□ -0.38
XRCC1-201ENST00000262887 UBE2ZQ9H832 354 aaPredicted RBP12.7□□□□□ -0.38
XRCC1-201ENST00000262887 AURKAIP1Q9NWT8 199 aaPredicted RBP12.7□□□□□ -0.38
XRCC1-201ENST00000262887 G3V3Y1 287 aa12.7□□□□□ -0.38
XRCC1-201ENST00000262887 GPM6AP51674 278 aa12.7□□□□□ -0.38
XRCC1-201ENST00000262887 CARD18P57730 90 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms