RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 SIGLECL1Q8N7X8 197 aa13.43□□□□□ -0.26
CHCHD3-201ENST00000262570 TMEM229BQ8NBD8 167 aa13.43□□□□□ -0.26
CHCHD3-201ENST00000262570 OR8U1Q8NH10 309 aa13.43□□□□□ -0.26
CHCHD3-201ENST00000262570 FAM216AQ8WUB2 273 aa13.43□□□□□ -0.26
CHCHD3-201ENST00000262570 GIMAP1Q8WWP7 306 aa13.43□□□□□ -0.26
CHCHD3-201ENST00000262570 RPEQ96AT9 228 aa13.43□□□□□ -0.26
CHCHD3-201ENST00000262570 TAS2R8Q9NYW2 309 aa13.43□□□□□ -0.26
CHCHD3-201ENST00000262570 OOSP1A8MZH6 123 aa13.42□□□□□ -0.26
CHCHD3-201ENST00000262570 CD74P04233 296 aa13.42□□□□□ -0.26
CHCHD3-201ENST00000262570 CSF1P09603 554 aa13.42□□□□□ -0.26
CHCHD3-201ENST00000262570 TBPP20226 339 aa13.42□□□□□ -0.26
CHCHD3-201ENST00000262570 FCGR2CP31995 323 aa13.42□□□□□ -0.26
CHCHD3-201ENST00000262570 TAS2R19P59542 299 aa13.42□□□□□ -0.26
CHCHD3-201ENST00000262570 ACTBL2Q562R1 376 aa13.42□□□□□ -0.26
CHCHD3-201ENST00000262570 VAX1Q5SQQ9 334 aa13.42□□□□□ -0.26
CHCHD3-201ENST00000262570 ZNF660Q6AZW8 331 aaPredicted RBP13.42□□□□□ -0.26
CHCHD3-201ENST00000262570 LDLRAD3Q86YD5 345 aa13.42□□□□□ -0.26
CHCHD3-201ENST00000262570 GDPD1Q8N9F7 314 aa13.42□□□□□ -0.26
CHCHD3-201ENST00000262570 TRIM63Q969Q1 353 aa13.42□□□□□ -0.26
CHCHD3-201ENST00000262570 ZDHHC16Q969W1 377 aa13.42□□□□□ -0.26
CHCHD3-201ENST00000262570 ABHD14BQ96IU4 210 aa13.42□□□□□ -0.26
CHCHD3-201ENST00000262570 SDHCQ99643 169 aaPredicted RBP13.42□□□□□ -0.26
CHCHD3-201ENST00000262570 PIPOXQ9P0Z9 390 aa13.42□□□□□ -0.26
CHCHD3-201ENST00000262570 RNF150Q9ULK6 438 aa13.42□□□□□ -0.26
CHCHD3-201ENST00000262570 SAA2-SAA4A0A096LPE2 208 aa13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 VGLL3A8MV65 326 aa13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 HSD17B6O14756 317 aa13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 RAB29O14966 203 aa13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 SAA2P0DJI9 122 aaPredicted RBP13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 ZNF816Q0VGE8 651 aaPredicted RBP13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 CCDC144NLQ6NUI1 221 aa13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 ZNF418Q8TF45 676 aaPredicted RBP13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 S100ZQ8WXG8 99 aa13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 TOMM40LQ969M1 308 aa13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 ZNF251Q9BRH9 671 aa13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 JMJD1CQ15652 2540 aa13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 ANKRD20A5PA0PJZ0 165 aa13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 M0QYG6 137 aa13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 PPYP01298 95 aa13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 GAPDHP04406 335 aaKnown RBP13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 AADACP22760 399 aa13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 AANATQ16613 207 aa13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 RNASE10Q5GAN6 216 aaKnown RBP13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 STEAP1BQ6NZ63 245 aa13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 RBMS3Q6XE24 437 aaKnown RBP13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 ZNF833PQ6ZTB9 187 aa13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 RTN4IP1Q8WWV3 396 aaPredicted RBP13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 TINAGL1Q9GZM7 467 aaPredicted RBP13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 GAB2Q9UQC2 676 aa13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 RBM7Q9Y580 266 aaKnown RBP13.41□□□□□ -0.26
CHCHD3-201ENST00000262570 IGKV1D-13A0A0B4J2D9 117 aa13.4□□□□□ -0.26
CHCHD3-201ENST00000262570 J3QRK9 145 aa13.4□□□□□ -0.26
CHCHD3-201ENST00000262570 PROP1O75360 226 aa13.4□□□□□ -0.26
CHCHD3-201ENST00000262570 IGKV1-13P0DP09 117 aa13.4□□□□□ -0.26
CHCHD3-201ENST00000262570 IER3P46695 156 aa13.4□□□□□ -0.26
CHCHD3-201ENST00000262570 REG1BP48304 166 aa13.4□□□□□ -0.26
CHCHD3-201ENST00000262570 DYNLT3P51808 116 aa13.4□□□□□ -0.26
CHCHD3-201ENST00000262570 LUMP51884 338 aaPredicted RBP13.4□□□□□ -0.26
CHCHD3-201ENST00000262570 BAK1Q16611 211 aa13.4□□□□□ -0.26
CHCHD3-201ENST00000262570 PLA1AQ53H76 456 aa13.4□□□□□ -0.26
CHCHD3-201ENST00000262570 FAM71F2Q6NXP2 309 aa13.4□□□□□ -0.26
CHCHD3-201ENST00000262570 OR8H3Q8N146 312 aa13.4□□□□□ -0.26
CHCHD3-201ENST00000262570 OR4D10Q8NGI6 311 aa13.4□□□□□ -0.26
CHCHD3-201ENST00000262570 OR6F1Q8NGZ6 308 aa13.4□□□□□ -0.26
CHCHD3-201ENST00000262570 SSX3Q99909 188 aa13.4□□□□□ -0.26
CHCHD3-201ENST00000262570 ZNF2Q9BSG1 426 aaPredicted RBP13.4□□□□□ -0.26
CHCHD3-201ENST00000262570 OR2D2Q9H210 308 aa13.4□□□□□ -0.26
CHCHD3-201ENST00000262570 ZNF221Q9UK13 617 aa13.4□□□□□ -0.26
CHCHD3-201ENST00000262570 IGHV1-3A0A0C4DH29 117 aa13.39□□□□□ -0.27
CHCHD3-201ENST00000262570 A0A1W2PPI3 338 aa13.39□□□□□ -0.27
CHCHD3-201ENST00000262570 RAB3DO95716 219 aa13.39□□□□□ -0.27
CHCHD3-201ENST00000262570 GPR12P47775 334 aa13.39□□□□□ -0.27
CHCHD3-201ENST00000262570 HILS1P60008 231 aa13.39□□□□□ -0.27
CHCHD3-201ENST00000262570 TSPAN5P62079 268 aa13.39□□□□□ -0.27
CHCHD3-201ENST00000262570 LRRC75BQ2VPJ9 315 aa13.39□□□□□ -0.27
CHCHD3-201ENST00000262570 RPL39P5Q59GN2 51 aa13.39□□□□□ -0.27
CHCHD3-201ENST00000262570 TGIF2LXQ8IUE1 241 aa13.39□□□□□ -0.27
CHCHD3-201ENST00000262570 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.39□□□□□ -0.27
CHCHD3-201ENST00000262570 PIFOQ8TCI5 191 aa13.39□□□□□ -0.27
CHCHD3-201ENST00000262570 SSMEM1Q8WWF3 244 aa13.39□□□□□ -0.27
CHCHD3-201ENST00000262570 S1PR3Q99500 378 aa13.39□□□□□ -0.27
CHCHD3-201ENST00000262570 A0A0A6YYJ9 748 aa13.38□□□□□ -0.27
CHCHD3-201ENST00000262570 HOXA3O43365 443 aaPredicted RBP13.38□□□□□ -0.27
CHCHD3-201ENST00000262570 TXNL1O43396 289 aa13.38□□□□□ -0.27
CHCHD3-201ENST00000262570 IGHV4-59P01825 116 aa13.38□□□□□ -0.27
CHCHD3-201ENST00000262570 IFNA6P05013 189 aa13.38□□□□□ -0.27
CHCHD3-201ENST00000262570 AKAIN1P0CW23 69 aa13.38□□□□□ -0.27
CHCHD3-201ENST00000262570 RAB13P51153 203 aa13.38□□□□□ -0.27
CHCHD3-201ENST00000262570 ARHGDIBP52566 201 aa13.38□□□□□ -0.27
CHCHD3-201ENST00000262570 BAMBIQ13145 260 aa13.38□□□□□ -0.27
CHCHD3-201ENST00000262570 HABP2Q14520 560 aaPredicted RBP13.38□□□□□ -0.27
CHCHD3-201ENST00000262570 TOMM5Q8N4H5 51 aa13.38□□□□□ -0.27
CHCHD3-201ENST00000262570 ARRDC1Q8N5I2 433 aa13.38□□□□□ -0.27
CHCHD3-201ENST00000262570 ESM1Q9NQ30 184 aa13.38□□□□□ -0.27
CHCHD3-201ENST00000262570 SDHAF2Q9NX18 166 aa13.38□□□□□ -0.27
CHCHD3-201ENST00000262570 TIMM23O14925 209 aa13.37□□□□□ -0.27
CHCHD3-201ENST00000262570 TCF21O43680 179 aa13.37□□□□□ -0.27
CHCHD3-201ENST00000262570 SLC22A5O76082 557 aa13.37□□□□□ -0.27
CHCHD3-201ENST00000262570 IFNA2P01563 188 aa13.37□□□□□ -0.27
CHCHD3-201ENST00000262570 IGLV2-14P01704 120 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms