RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 PNKDQ8N490 385 aa10.5□□□□□ -0.73
SPG11-201ENST00000261866 LOC105371242A0A075B767 164 aa10.5□□□□□ -0.73
SPG11-201ENST00000261866 ALX3O95076 343 aa10.5□□□□□ -0.73
SPG11-201ENST00000261866 CDKN1AP38936 164 aa10.5□□□□□ -0.73
SPG11-201ENST00000261866 TM4SF20Q53R12 229 aa10.5□□□□□ -0.73
SPG11-201ENST00000261866 PEAR1Q5VY43 1037 aaPredicted RBP10.5□□□□□ -0.73
SPG11-201ENST00000261866 LDLRAD3Q86YD5 345 aa10.5□□□□□ -0.73
SPG11-201ENST00000261866 IGHV3-49A0A0A0MS15 119 aa10.49□□□□□ -0.73
SPG11-201ENST00000261866 SLC25A17O43808 307 aa10.49□□□□□ -0.73
SPG11-201ENST00000261866 PTP4A3O75365 173 aa10.49□□□□□ -0.73
SPG11-201ENST00000261866 ZNF738Q8NE65 137 aa10.49□□□□□ -0.73
SPG11-201ENST00000261866 MYOZ3Q8TDC0 251 aa10.49□□□□□ -0.73
SPG11-201ENST00000261866 GHITMQ9H3K2 345 aa10.49□□□□□ -0.73
SPG11-201ENST00000261866 ZDHHC8Q9ULC8 765 aa10.49□□□□□ -0.73
SPG11-201ENST00000261866 HIGD1AQ9Y241 93 aa10.49□□□□□ -0.73
SPG11-201ENST00000261866 RCC1P18754 421 aaPredicted RBP10.49□□□□□ -0.73
SPG11-201ENST00000261866 ID1P41134 155 aa10.49□□□□□ -0.73
SPG11-201ENST00000261866 FAM27BQ5VT28 67 aa10.49□□□□□ -0.73
SPG11-201ENST00000261866 GAPDHP04406 335 aaKnown RBP10.49□□□□□ -0.73
SPG11-201ENST00000261866 S100A8P05109 93 aa10.49□□□□□ -0.73
SPG11-201ENST00000261866 FCGR3AP08637 254 aa10.49□□□□□ -0.73
SPG11-201ENST00000261866 NCMAPQ5T1S8 102 aa10.49□□□□□ -0.73
SPG11-201ENST00000261866 CCDC144NLQ6NUI1 221 aa10.49□□□□□ -0.73
SPG11-201ENST00000261866 EIF4E3Q8N5X7 224 aaKnown RBP10.49□□□□□ -0.73
SPG11-201ENST00000261866 WNT2BQ93097 391 aa10.49□□□□□ -0.73
SPG11-201ENST00000261866 WNT9BO14905 357 aa10.49□□□□□ -0.73
SPG11-201ENST00000261866 CACNG7P62955 275 aa10.49□□□□□ -0.73
SPG11-201ENST00000261866 EWSR1Q01844 656 aaKnown RBP eCLIP10.49□□□□□ -0.73
SPG11-201ENST00000261866 IL36RNQ9UBH0 155 aa10.49□□□□□ -0.73
SPG11-201ENST00000261866 EIF4EBP2Q13542 120 aaPredicted RBP10.49□□□□□ -0.73
SPG11-201ENST00000261866 TMEM255AQ5JRV8 349 aa10.49□□□□□ -0.73
SPG11-201ENST00000261866 IGHV1-69-2A0A0G2JMI3 117 aa10.49□□□□□ -0.73
SPG11-201ENST00000261866 SGK494Q96LW2 274 aa10.49□□□□□ -0.73
SPG11-201ENST00000261866 ST6GALNAC2Q9UJ37 374 aa10.49□□□□□ -0.73
SPG11-201ENST00000261866 KCNE5Q9UJ90 142 aa10.49□□□□□ -0.73
SPG11-201ENST00000261866 OTX1P32242 354 aaPredicted RBP10.48□□□□□ -0.73
SPG11-201ENST00000261866 CRYBA2P53672 197 aa10.48□□□□□ -0.73
SPG11-201ENST00000261866 P2RY6Q15077 328 aa10.48□□□□□ -0.73
SPG11-201ENST00000261866 PPP1R32Q7Z5V6 425 aa10.48□□□□□ -0.73
SPG11-201ENST00000261866 OR10C1Q96KK4 312 aa10.48□□□□□ -0.73
SPG11-201ENST00000261866 TOLLIPQ9H0E2 274 aa10.48□□□□□ -0.73
SPG11-201ENST00000261866 MIXL1Q9H2W2 232 aa10.48□□□□□ -0.73
SPG11-201ENST00000261866 ARID1AO14497 2285 aa10.48□□□□□ -0.73
SPG11-201ENST00000261866 PRB4P10163 310 aaPredicted RBP10.48□□□□□ -0.73
SPG11-201ENST00000261866 GABRA6Q16445 453 aa10.48□□□□□ -0.73
SPG11-201ENST00000261866 FAM74A4Q5TZK3 123 aa10.48□□□□□ -0.73
SPG11-201ENST00000261866 ZNF426Q9BUY5 554 aa10.48□□□□□ -0.73
SPG11-201ENST00000261866 BEX4Q9NWD9 120 aaPredicted RBP10.48□□□□□ -0.73
SPG11-201ENST00000261866 TMEM91Q6ZNR0 172 aa10.48□□□□□ -0.73
SPG11-201ENST00000261866 PSMB11A5LHX3 300 aa10.48□□□□□ -0.73
SPG11-201ENST00000261866 MAP1LC3CQ9BXW4 147 aa10.48□□□□□ -0.73
SPG11-201ENST00000261866 A0A1W2PR77 199 aa10.48□□□□□ -0.73
SPG11-201ENST00000261866 DHRS7CA6NNS2 312 aa10.48□□□□□ -0.73
SPG11-201ENST00000261866 RAMP1O60894 148 aa10.48□□□□□ -0.73
SPG11-201ENST00000261866 ABHD12Q8N2K0 398 aa10.48□□□□□ -0.73
SPG11-201ENST00000261866 BET1LQ9NYM9 111 aa10.48□□□□□ -0.73
SPG11-201ENST00000261866 RBFOX3A6NFN3 312 aa10.48□□□□□ -0.73
SPG11-201ENST00000261866 SNRPEP62304 92 aaKnown RBP10.48□□□□□ -0.73
SPG11-201ENST00000261866 HERPUD1Q15011 391 aa10.48□□□□□ -0.73
SPG11-201ENST00000261866 DIDO1Q9BTC0 2240 aaKnown RBP10.47□□□□□ -0.73
SPG11-201ENST00000261866 THY1P04216 161 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 MPV17P39210 176 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 KIR2DL2P43627 348 aaPredicted RBP10.47□□□□□ -0.73
SPG11-201ENST00000261866 PDLIM4P50479 330 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 RAB37Q96AX2 223 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 NEURL2Q9BR09 285 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 PITPNC1Q9UKF7 332 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 CEACAM18A8MTB9 384 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 DXOO77932 396 aaKnown RBP10.47□□□□□ -0.73
SPG11-201ENST00000261866 GLIPR1P48060 266 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 NPBWR2P48146 333 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 RUNX1Q01196 453 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 IL24Q13007 206 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 HIST3H3Q16695 136 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 DCAF12L2Q5VW00 463 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 ZNRF1Q8ND25 227 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 DUX5Q96PT3 197 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 SCN4AP35499 1836 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 UNC13CQ8NB66 2214 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 NUDT3O95989 172 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 EBLN2Q6P2I7 272 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 YAE1D1Q9NRH1 226 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 V9GYH0 126 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 LOC107984156A0A0G2JMH3 177 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 TEPPQ6URK8 271 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 ARL17AQ8IVW1 177 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 OIT3Q8WWZ8 545 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 TUBA4BQ9H853 241 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 IGHV3OR16-8A0A075B7F1 116 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 FCGR2BP31994 310 aaPredicted RBP10.47□□□□□ -0.73
SPG11-201ENST00000261866 RPL27AP46776 148 aaKnown RBP10.47□□□□□ -0.73
SPG11-201ENST00000261866 IZUMO4Q1ZYL8 232 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 SNRNP40Q96DI7 357 aaKnown RBP10.47□□□□□ -0.73
SPG11-201ENST00000261866 ST6GAL2Q96JF0 529 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 METTL26Q96S19 204 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 hCG_38984A0A1B0GV85 526 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 SSTR5P35346 364 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 P2RY1P47900 373 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 OR13C6PQ8NH95 151 aa10.47□□□□□ -0.73
SPG11-201ENST00000261866 C10orf35Q96D05 121 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms